RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 COL4A6Q14031 1691 aa11.46□□□□□ -0.58
LMX1B-201ENST00000355497 K7EMT4 169 aa11.45□□□□□ -0.58
LMX1B-201ENST00000355497 FER1L5A0AVI2 2057 aa11.45□□□□□ -0.58
LMX1B-201ENST00000355497 KIAA2026Q5HYC2 2103 aa11.45□□□□□ -0.58
LMX1B-201ENST00000355497 CTRLP40313 264 aa11.45□□□□□ -0.58
LMX1B-201ENST00000355497 NFE4Q86UQ8 179 aa11.45□□□□□ -0.58
LMX1B-201ENST00000355497 Q8N9W7 124 aa11.45□□□□□ -0.58
LMX1B-201ENST00000355497 ARFGEF3Q5TH69 2177 aa11.44□□□□□ -0.58
LMX1B-201ENST00000355497 PHF3Q92576 2039 aaKnown RBP11.44□□□□□ -0.58
LMX1B-201ENST00000355497 KLK12Q9UKR0 248 aa11.44□□□□□ -0.58
LMX1B-201ENST00000355497 ZSWIM8A7E2V4 1837 aa11.44□□□□□ -0.58
LMX1B-201ENST00000355497 SIP14410 1827 aa11.44□□□□□ -0.58
LMX1B-201ENST00000355497 C4orf3Q8WVX3 66 aa11.44□□□□□ -0.58
LMX1B-201ENST00000355497 KMT2EQ8IZD2 1858 aa11.44□□□□□ -0.58
LMX1B-201ENST00000355497 SLX1AQ9BQ83 275 aa11.44□□□□□ -0.58
LMX1B-201ENST00000355497 INTS1Q8N201 2190 aaKnown RBP11.44□□□□□ -0.58
LMX1B-201ENST00000355497 LTBP1Q14766 1721 aa11.43□□□□□ -0.58
LMX1B-201ENST00000355497 G3V4G9 280 aa11.43□□□□□ -0.58
LMX1B-201ENST00000355497 FAM167A-AS1Q96KT0 104 aa11.43□□□□□ -0.58
LMX1B-201ENST00000355497 RNASE8Q8TDE3 154 aaKnown RBP11.43□□□□□ -0.58
LMX1B-201ENST00000355497 KLK5Q9Y337 293 aaPredicted RBP11.43□□□□□ -0.58
LMX1B-201ENST00000355497 KRTAP27-1Q3LI81 207 aa11.43□□□□□ -0.58
LMX1B-201ENST00000355497 ANK1P16157 1881 aa11.43□□□□□ -0.58
LMX1B-201ENST00000355497 TRAV23DV6A0A075B6W5 121 aa11.43□□□□□ -0.58
LMX1B-201ENST00000355497 Q6ZUT4 128 aa11.43□□□□□ -0.58
LMX1B-201ENST00000355497 HEATR1Q9H583 2144 aaKnown RBP11.42□□□□□ -0.58
LMX1B-201ENST00000355497 ODF1Q14990 250 aa11.42□□□□□ -0.58
LMX1B-201ENST00000355497 PRR15LQ9BU68 103 aa11.42□□□□□ -0.58
LMX1B-201ENST00000355497 USP17L23D6RBM5 183 aa11.42□□□□□ -0.58
LMX1B-201ENST00000355497 MYCNOSP40205 109 aa11.42□□□□□ -0.58
LMX1B-201ENST00000355497 DEFB135Q30KP9 77 aa11.42□□□□□ -0.58
LMX1B-201ENST00000355497 DOCK11Q5JSL3 2073 aa11.42□□□□□ -0.58
LMX1B-201ENST00000355497 IGKV2D-26A0A0A0MRZ7 120 aa11.42□□□□□ -0.58
LMX1B-201ENST00000355497 TRBV6-1A0A0K0K1D8 114 aa11.41□□□□□ -0.58
LMX1B-201ENST00000355497 DEFB4AO15263 64 aa11.41□□□□□ -0.58
LMX1B-201ENST00000355497 LINC00643Q86TS7 51 aa11.41□□□□□ -0.58
LMX1B-201ENST00000355497 GPHB5Q86YW7 130 aa11.41□□□□□ -0.58
LMX1B-201ENST00000355497 SBF1O95248 1867 aa11.41□□□□□ -0.58
LMX1B-201ENST00000355497 FAM240AA0A1B0GVK7 77 aa11.41□□□□□ -0.58
LMX1B-201ENST00000355497 BPY2O14599 106 aa11.41□□□□□ -0.58
LMX1B-201ENST00000355497 MIAQ16674 131 aa11.41□□□□□ -0.58
LMX1B-201ENST00000355497 NDUFA11Q86Y39 141 aa11.41□□□□□ -0.58
LMX1B-201ENST00000355497 C10orf105Q8TEF2 133 aa11.41□□□□□ -0.58
LMX1B-201ENST00000355497 TMEM89A2RUT3 159 aa11.4□□□□□ -0.58
LMX1B-201ENST00000355497 MLST8Q9BVC4 326 aa11.4□□□□□ -0.58
LMX1B-201ENST00000355497 CEP250Q9BV73 2442 aa11.4□□□□□ -0.58
LMX1B-201ENST00000355497 A0A0U1RQV1 116 aa11.4□□□□□ -0.58
LMX1B-201ENST00000355497 RNF138Q8WVD3 245 aa11.4□□□□□ -0.58
LMX1B-201ENST00000355497 DOCK9Q9BZ29 2069 aa11.4□□□□□ -0.58
LMX1B-201ENST00000355497 AKAP6Q13023 2319 aa11.4□□□□□ -0.58
LMX1B-201ENST00000355497 FAM236DA0A1B0GTK5 79 aa11.4□□□□□ -0.58
LMX1B-201ENST00000355497 FAM236CP0DP71 79 aa11.4□□□□□ -0.58
LMX1B-201ENST00000355497 C3orf22Q8N5N4 141 aa11.4□□□□□ -0.58
LMX1B-201ENST00000355497 C20orf203Q8NBC4 194 aa11.4□□□□□ -0.58
LMX1B-201ENST00000355497 TMEM263Q8WUH6 116 aaKnown RBP11.4□□□□□ -0.58
LMX1B-201ENST00000355497 NDUFC2-KCTD14E9PQ53 114 aa11.4□□□□□ -0.59
LMX1B-201ENST00000355497 PIP4P1Q86T03 277 aa11.39□□□□□ -0.59
LMX1B-201ENST00000355497 CEP290O15078 2479 aa11.39□□□□□ -0.59
LMX1B-201ENST00000355497 PLXNA4Q9HCM2 1894 aa11.39□□□□□ -0.59
LMX1B-201ENST00000355497 PLA2G2EQ9NZK7 142 aa11.38□□□□□ -0.59
LMX1B-201ENST00000355497 TCL1BO95988 128 aa11.38□□□□□ -0.59
LMX1B-201ENST00000355497 MDFICQ9P1T7 246 aa11.38□□□□□ -0.59
LMX1B-201ENST00000355497 MED12Q93074 2177 aa11.38□□□□□ -0.59
LMX1B-201ENST00000355497 PTH2Q96A98 100 aa11.38□□□□□ -0.59
LMX1B-201ENST00000355497 TICRRQ7Z2Z1 1910 aa11.37□□□□□ -0.59
LMX1B-201ENST00000355497 THSD7BQ9C0I4 1608 aa11.37□□□□□ -0.59
LMX1B-201ENST00000355497 TRAV26-1A0A087WT03 109 aa11.37□□□□□ -0.59
LMX1B-201ENST00000355497 PRO0255Q9UI72 69 aa11.37□□□□□ -0.59
LMX1B-201ENST00000355497 V9GYY9 64 aa11.37□□□□□ -0.59
LMX1B-201ENST00000355497 C14orf177Q52M58 125 aa11.36□□□□□ -0.59
LMX1B-201ENST00000355497 SMAD5-AS1Q9Y6J3 95 aa11.36□□□□□ -0.59
LMX1B-201ENST00000355497 UFSP1Q6NVU6 142 aa11.36□□□□□ -0.59
LMX1B-201ENST00000355497 DEFB1P60022 68 aa11.36□□□□□ -0.59
LMX1B-201ENST00000355497 TRBV10-1A0A0K0K1A3 114 aa11.35□□□□□ -0.59
LMX1B-201ENST00000355497 HIST2H2BDQ6DRA6 164 aa11.35□□□□□ -0.59
LMX1B-201ENST00000355497 IGFL2Q6UWQ7 119 aa11.35□□□□□ -0.59
LMX1B-201ENST00000355497 Q6ZSR3 168 aa11.35□□□□□ -0.59
LMX1B-201ENST00000355497 TCF20Q9UGU0 1960 aaKnown RBP11.35□□□□□ -0.59
LMX1B-201ENST00000355497 A0A0J9YX75 114 aa11.35□□□□□ -0.59
LMX1B-201ENST00000355497 VWA8A3KMH1 1905 aa11.35□□□□□ -0.59
LMX1B-201ENST00000355497 CEMP1Q6PRD7 247 aaPredicted RBP11.35□□□□□ -0.59
LMX1B-201ENST00000355497 WFDC11Q8NEX6 87 aa11.35□□□□□ -0.59
LMX1B-201ENST00000355497 SIRPDQ9H106 197 aa11.34□□□□□ -0.59
LMX1B-201ENST00000355497 WDR81Q562E7 1941 aa11.34□□□□□ -0.59
LMX1B-201ENST00000355497 A0A0J9YXY3 114 aa11.34□□□□□ -0.59
LMX1B-201ENST00000355497 ZFAND2AQ8N6M9 145 aa11.34□□□□□ -0.59
LMX1B-201ENST00000355497 C19orf71A6NCJ1 209 aa11.34□□□□□ -0.59
LMX1B-201ENST00000355497 Q8N7P7 452 aa11.34□□□□□ -0.59
LMX1B-201ENST00000355497 HEATR5AQ86XA9 2040 aa11.34□□□□□ -0.59
LMX1B-201ENST00000355497 IGKV2-24A0A0C4DH68 120 aa11.33□□□□□ -0.6
LMX1B-201ENST00000355497 C20orf197Q8N268 126 aa11.33□□□□□ -0.6
LMX1B-201ENST00000355497 KIAA1671Q9BY89 1806 aa11.33□□□□□ -0.6
LMX1B-201ENST00000355497 SDIM1Q6ZPB5 146 aa11.33□□□□□ -0.6
LMX1B-201ENST00000355497 LYPD6Q86Y78 171 aa11.33□□□□□ -0.6
LMX1B-201ENST00000355497 MYLKQ15746 1914 aa11.33□□□□□ -0.6
LMX1B-201ENST00000355497 ZFP36P26651 326 aaKnown RBP11.33□□□□□ -0.6
LMX1B-201ENST00000355497 MAP6D1Q9H9H5 199 aa11.33□□□□□ -0.6
LMX1B-201ENST00000355497 FNDC1Q4ZHG4 1894 aaPredicted RBP11.33□□□□□ -0.6
LMX1B-201ENST00000355497 CACNA1EQ15878 2313 aa11.33□□□□□ -0.6
LMX1B-201ENST00000355497 ODF3L1Q8IXM7 274 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms