RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 RSPO1Q2MKA7 263 aaPredicted RBP3.95□□□□□ -1.78
SKP1-202ENST00000353411 ZNF295-AS1Q8N0V1 137 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 GGNQ86UU5 652 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 ZNRF2Q8NHG8 242 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 MPLKIPQ8TAP9 179 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 USP24Q9UPU5 2620 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 ELANEP08246 267 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 P0C879 139 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 CD59P13987 128 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 UPK3BQ9BT76 320 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 C15orf65H3BRN8 121 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 RFPL3SP0C7P2 107 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 GATA3P23771 443 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 DAZ2Q13117 558 aaKnown RBP3.94□□□□□ -1.78
SKP1-202ENST00000353411 DAZ4Q86SG3 579 aaKnown RBP3.94□□□□□ -1.78
SKP1-202ENST00000353411 DAZ1Q9NQZ3 744 aaKnown RBP3.94□□□□□ -1.78
SKP1-202ENST00000353411 DAZ3Q9NR90 486 aaKnown RBP3.94□□□□□ -1.78
SKP1-202ENST00000353411 IGHV3-49A0A0A0MS15 119 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 INS-IGF2F8WCM5 200 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 IGHV1-69P01742 117 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 WT1-ASQ06250 92 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 A0A0J9YY99 117 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 TRGV3P03979 118 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 FAM201AQ5SY85 155 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 Q6ZS52 159 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 NFE4Q86UQ8 179 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 MRPL53Q96EL3 112 aaKnown RBP3.94□□□□□ -1.78
SKP1-202ENST00000353411 TRAV23DV6A0A075B6W5 121 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 TMEM256-PLSCR3K7ERE1 68 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 IGLV2-14P01704 120 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 PAX8Q06710 450 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 MIAQ16674 131 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 A0A087WWL8 130 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 CRYGAP11844 174 aa3.94□□□□□ -1.78
SKP1-202ENST00000353411 HIST2H2BCQ6DN03 193 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 HIST2H2BDQ6DRA6 164 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 IGHV1-2P23083 117 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 DIAPH2-AS1Q14236 149 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 IGKV1D-17A0A075B6S4 117 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 NXPH4O95158 308 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 IGHV3-30P01768 117 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 IGHV3-30-5P0DP03 117 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 CCL3L1P16619 93 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 RPL36AP83881 106 aaKnown RBP3.93□□□□□ -1.78
SKP1-202ENST00000353411 NEXN-AS1Q8NBZ9 246 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 RNF138Q8WVD3 245 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 RPL36ALQ969Q0 106 aaKnown RBP3.93□□□□□ -1.78
SKP1-202ENST00000353411 PRR19A6NJB7 356 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 TRIAP1O43715 76 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 FUSP35637 526 aaKnown RBP eCLIP3.93□□□□□ -1.78
SKP1-202ENST00000353411 LOXL1Q08397 574 aaPredicted RBP3.93□□□□□ -1.78
SKP1-202ENST00000353411 C15orf32Q32M92 178 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 MAPKAPK5-AS1Q8N8E1 139 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 RPL35AP18077 110 aaKnown RBP3.93□□□□□ -1.78
SKP1-202ENST00000353411 UBE2E1P51965 193 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 BLCAPP62952 87 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 IGHV1-3A0A0C4DH29 117 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 IGHV3OR16-8A0A075B7F1 116 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 J3QLI3 93 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 TMEM61Q8N0U2 210 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 MBD3L2Q8NHZ7 208 aaPredicted RBP3.93□□□□□ -1.78
SKP1-202ENST00000353411 LST1O00453 97 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 WIPF1O43516 503 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 Q6ZQT7 251 aa3.93□□□□□ -1.78
SKP1-202ENST00000353411 UTRNP46939 3433 aa3.92□□□□□ -1.78
SKP1-202ENST00000353411 A8MZ25 164 aa3.92□□□□□ -1.78
SKP1-202ENST00000353411 TRBV12-3P01733 135 aa3.92□□□□□ -1.78
SKP1-202ENST00000353411 GATA1P15976 413 aaPredicted RBP3.92□□□□□ -1.78
SKP1-202ENST00000353411 IGHV1-8P0DP01 117 aa3.92□□□□□ -1.78
SKP1-202ENST00000353411 CENPFP49454 3210 aa3.92□□□□□ -1.78
SKP1-202ENST00000353411 MBD3L5A6NJ08 208 aaPredicted RBP3.92□□□□□ -1.78
SKP1-202ENST00000353411 IGKV3-20P01619 116 aa3.92□□□□□ -1.78
SKP1-202ENST00000353411 Q6JHZ5 121 aa3.92□□□□□ -1.78
SKP1-202ENST00000353411 Q9H8V8 135 aa3.92□□□□□ -1.78
SKP1-202ENST00000353411 UBE2D1P51668 147 aa3.92□□□□□ -1.78
SKP1-202ENST00000353411 KRTAP27-1Q3LI81 207 aa3.92□□□□□ -1.78
SKP1-202ENST00000353411 WISP1O95388 367 aa3.92□□□□□ -1.78
SKP1-202ENST00000353411 TFF1P04155 84 aa3.92□□□□□ -1.78
SKP1-202ENST00000353411 DSCR9P59020 149 aa3.92□□□□□ -1.78
SKP1-202ENST00000353411 PMAIP1Q13794 54 aa3.92□□□□□ -1.78
SKP1-202ENST00000353411 SP5Q6BEB4 398 aaPredicted RBP3.92□□□□□ -1.78
SKP1-202ENST00000353411 C1orf159Q96HA4 380 aa3.92□□□□□ -1.78
SKP1-202ENST00000353411 A0A0J9YXY3 114 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 C17orf100A8MU93 164 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 PATE2Q6UY27 113 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 IGHV1-58A0A0C4DH39 117 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 H7C423 109 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 CCL4P13236 92 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 LINC00311Q8N616 119 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 LINC01587Q99440 93 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 C14orf132Q9NPU4 83 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 HHLA3Q9XRX5 114 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 MED14OSP0DP75 135 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 WFDC9Q8NEX5 89 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 CFHR1Q03591 330 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 ZNF491Q8N8L2 437 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 MRPL36Q9P0J6 103 aaKnown RBP3.91□□□□□ -1.78
SKP1-202ENST00000353411 SPTSSBQ8NFR3 76 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 IGKV1OR2-108A0A075B7D4 117 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 ABCA12Q86UK0 2595 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms