RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 UBR5O95071 2799 aaPredicted RBP16.4■□□□□ 0.22
NKX2-4-201ENST00000351817 SNRPD3P62318 126 aaKnown RBP16.39■□□□□ 0.22
NKX2-4-201ENST00000351817 PRADC1Q9BSG0 188 aa16.39■□□□□ 0.22
NKX2-4-201ENST00000351817 TP53TG1Q9Y2A0 90 aa16.39■□□□□ 0.22
NKX2-4-201ENST00000351817 A0A087WWL8 130 aa16.39■□□□□ 0.21
NKX2-4-201ENST00000351817 A0A0J9YX75 114 aa16.39■□□□□ 0.21
NKX2-4-201ENST00000351817 TMEM238LA0A1B0GVL6 79 aa16.39■□□□□ 0.21
NKX2-4-201ENST00000351817 F5H697 171 aa16.39■□□□□ 0.21
NKX2-4-201ENST00000351817 LGALS1P09382 135 aaKnown RBP16.39■□□□□ 0.21
NKX2-4-201ENST00000351817 LINC01356Q8N9X3 169 aa16.39■□□□□ 0.21
NKX2-4-201ENST00000351817 C9orf85Q96MD7 179 aa16.39■□□□□ 0.21
NKX2-4-201ENST00000351817 KIR2DL4Q99706 377 aa16.39■□□□□ 0.21
NKX2-4-201ENST00000351817 MAP1AP78559 2803 aaPredicted RBP16.39■□□□□ 0.21
NKX2-4-201ENST00000351817 G3V4G9 280 aa16.38■□□□□ 0.21
NKX2-4-201ENST00000351817 CRYGDP07320 174 aa16.38■□□□□ 0.21
NKX2-4-201ENST00000351817 C10orf99Q6UWK7 81 aa16.38■□□□□ 0.21
NKX2-4-201ENST00000351817 A0A096LNT2 108 aa16.38■□□□□ 0.21
NKX2-4-201ENST00000351817 IGHV3-16A0A0C4DH30 117 aa16.38■□□□□ 0.21
NKX2-4-201ENST00000351817 LGALS9O00182 355 aa16.38■□□□□ 0.21
NKX2-4-201ENST00000351817 PAPPA-AS1Q5QFB9 102 aa16.38■□□□□ 0.21
NKX2-4-201ENST00000351817 IGIPA6NJ69 53 aa16.37■□□□□ 0.21
NKX2-4-201ENST00000351817 K7EQG2 157 aa16.37■□□□□ 0.21
NKX2-4-201ENST00000351817 ZNF479Q96JC4 524 aa16.37■□□□□ 0.21
NKX2-4-201ENST00000351817 TSHBP01222 138 aa16.37■□□□□ 0.21
NKX2-4-201ENST00000351817 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.37■□□□□ 0.21
NKX2-4-201ENST00000351817 TMEM141Q96I45 108 aa16.37■□□□□ 0.21
NKX2-4-201ENST00000351817 TRBV6-5A0A0K0K1A5 114 aa16.36■□□□□ 0.21
NKX2-4-201ENST00000351817 A0A1B0GWB2 263 aa16.36■□□□□ 0.21
NKX2-4-201ENST00000351817 SCGB2A2Q13296 93 aa16.36■□□□□ 0.21
NKX2-4-201ENST00000351817 SYT8Q8NBV8 401 aa16.36■□□□□ 0.21
NKX2-4-201ENST00000351817 SDHAF1A6NFY7 115 aa16.35■□□□□ 0.21
NKX2-4-201ENST00000351817 PMVKQ15126 192 aa16.35■□□□□ 0.21
NKX2-4-201ENST00000351817 FAM208BQ5VWN6 2430 aa16.35■□□□□ 0.21
NKX2-4-201ENST00000351817 TRBV27A0A0K0K1C4 114 aa16.35■□□□□ 0.21
NKX2-4-201ENST00000351817 ZNF815PA8K554 130 aa16.35■□□□□ 0.21
NKX2-4-201ENST00000351817 RIPPLY3P57055 190 aa16.35■□□□□ 0.21
NKX2-4-201ENST00000351817 FOXI2Q6ZQN5 318 aa16.35■□□□□ 0.21
NKX2-4-201ENST00000351817 TIMM17AQ99595 171 aa16.35■□□□□ 0.21
NKX2-4-201ENST00000351817 J3QLI3 93 aa16.34■□□□□ 0.21
NKX2-4-201ENST00000351817 IGLV4-69A0A075B6H9 119 aa16.34■□□□□ 0.21
NKX2-4-201ENST00000351817 TRAV12-2A0A075B6T6 113 aa16.34■□□□□ 0.21
NKX2-4-201ENST00000351817 IGKV3-20P01619 116 aa16.34■□□□□ 0.21
NKX2-4-201ENST00000351817 MDFICQ9P1T7 246 aa16.34■□□□□ 0.21
NKX2-4-201ENST00000351817 C11orf86A6NJI1 115 aa16.33■□□□□ 0.2
NKX2-4-201ENST00000351817 HERVK_113P61574 105 aa16.33■□□□□ 0.2
NKX2-4-201ENST00000351817 FAM74A4Q5TZK3 123 aa16.33■□□□□ 0.2
NKX2-4-201ENST00000351817 IGHV1OR15-1A0A075B7D0 117 aa16.33■□□□□ 0.2
NKX2-4-201ENST00000351817 RPL39P62891 51 aaKnown RBP16.33■□□□□ 0.2
NKX2-4-201ENST00000351817 RRN3P1Q2M238 152 aa16.33■□□□□ 0.2
NKX2-4-201ENST00000351817 Q8N1Y9 231 aa16.33■□□□□ 0.2
NKX2-4-201ENST00000351817 SYNJ2BPP57105 145 aa16.32■□□□□ 0.2
NKX2-4-201ENST00000351817 CD300EQ496F6 205 aaPredicted RBP16.32■□□□□ 0.2
NKX2-4-201ENST00000351817 LRRK2Q5S007 2527 aa16.32■□□□□ 0.2
NKX2-4-201ENST00000351817 KRTAP10-9P60411 292 aa16.31■□□□□ 0.2
NKX2-4-201ENST00000351817 ZNF56Q15929 161 aa16.31■□□□□ 0.2
NKX2-4-201ENST00000351817 SCGB1D4Q6XE38 83 aa16.31■□□□□ 0.2
NKX2-4-201ENST00000351817 MAPK1IP1LQ8NDC0 245 aa16.31■□□□□ 0.2
NKX2-4-201ENST00000351817 SPINK13Q1W4C9 94 aa16.3■□□□□ 0.2
NKX2-4-201ENST00000351817 DEFB104AQ8WTQ1 72 aa16.3■□□□□ 0.2
NKX2-4-201ENST00000351817 ANKRD17O75179 2603 aaKnown RBP16.3■□□□□ 0.2
NKX2-4-201ENST00000351817 M0QY20 66 aa16.3■□□□□ 0.2
NKX2-4-201ENST00000351817 ELANEP08246 267 aa16.3■□□□□ 0.2
NKX2-4-201ENST00000351817 CSPG4Q6UVK1 2322 aa16.29■□□□□ 0.2
NKX2-4-201ENST00000351817 TGFAP01135 160 aa16.29■□□□□ 0.2
NKX2-4-201ENST00000351817 PLEKHB2Q96CS7 222 aa16.29■□□□□ 0.2
NKX2-4-201ENST00000351817 VPREB3Q9UKI3 123 aa16.29■□□□□ 0.2
NKX2-4-201ENST00000351817 A6NJY4 79 aa16.29■□□□□ 0.2
NKX2-4-201ENST00000351817 F8W1H4 67 aa16.29■□□□□ 0.2
NKX2-4-201ENST00000351817 HOXA3O43365 443 aaPredicted RBP16.29■□□□□ 0.2
NKX2-4-201ENST00000351817 MORN3Q6PF18 240 aaPredicted RBP16.29■□□□□ 0.2
NKX2-4-201ENST00000351817 EPG5Q9HCE0 2579 aa16.28■□□□□ 0.2
NKX2-4-201ENST00000351817 EMP1P54849 157 aa16.28■□□□□ 0.2
NKX2-4-201ENST00000351817 RPL24P83731 157 aaKnown RBP16.28■□□□□ 0.2
NKX2-4-201ENST00000351817 TRPT1Q86TN4 253 aaKnown RBP16.28■□□□□ 0.2
NKX2-4-201ENST00000351817 ZNF256Q9Y2P7 627 aaPredicted RBP16.28■□□□□ 0.2
NKX2-4-201ENST00000351817 POLQO75417 2590 aa16.28■□□□□ 0.2
NKX2-4-201ENST00000351817 RHOHQ15669 191 aa16.27■□□□□ 0.2
NKX2-4-201ENST00000351817 RNF152Q8N8N0 203 aa16.27■□□□□ 0.2
NKX2-4-201ENST00000351817 KLHL30-AS1Q8NEE0 82 aa16.27■□□□□ 0.2
NKX2-4-201ENST00000351817 SRSF9Q13242 221 aaKnown RBP eCLIP16.27■□□□□ 0.19
NKX2-4-201ENST00000351817 NSUN5P1Q3KNT7 163 aa16.27■□□□□ 0.19
NKX2-4-201ENST00000351817 ZNF876PQ49A33 203 aa16.27■□□□□ 0.19
NKX2-4-201ENST00000351817 HOXD3P31249 432 aaPredicted RBP16.26■□□□□ 0.19
NKX2-4-201ENST00000351817 UBE2E2Q96LR5 201 aa16.26■□□□□ 0.19
NKX2-4-201ENST00000351817 TRGV11A0A075B6L2 103 aa16.25■□□□□ 0.19
NKX2-4-201ENST00000351817 TEX48A0A1B0GUV7 120 aa16.25■□□□□ 0.19
NKX2-4-201ENST00000351817 AMTNQ6UX39 209 aa16.25■□□□□ 0.19
NKX2-4-201ENST00000351817 ZNF702PQ9H963 129 aa16.25■□□□□ 0.19
NKX2-4-201ENST00000351817 DUX5Q96PT3 197 aa16.25■□□□□ 0.19
NKX2-4-201ENST00000351817 H3BMG7 143 aa16.24■□□□□ 0.19
NKX2-4-201ENST00000351817 TMEM170BQ5T4T1 132 aa16.24■□□□□ 0.19
NKX2-4-201ENST00000351817 Q6YL49 198 aa16.24■□□□□ 0.19
NKX2-4-201ENST00000351817 USP9YO00507 2555 aaPredicted RBP16.24■□□□□ 0.19
NKX2-4-201ENST00000351817 TMEM238C9JI98 176 aa16.23■□□□□ 0.19
NKX2-4-201ENST00000351817 ZNRF2Q8NHG8 242 aa16.23■□□□□ 0.19
NKX2-4-201ENST00000351817 A0A0J9YY99 117 aa16.23■□□□□ 0.19
NKX2-4-201ENST00000351817 UBE2D1P51668 147 aa16.23■□□□□ 0.19
NKX2-4-201ENST00000351817 WFDC2Q14508 124 aa16.22■□□□□ 0.19
NKX2-4-201ENST00000351817 PGPEP1Q9NXJ5 209 aa16.22■□□□□ 0.19
NKX2-4-201ENST00000351817 CENPEQ02224 2701 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms