RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 CD28P10747 220 aa12.34□□□□□ -0.43
SAMM50-201ENST00000350028 SPAG8Q99932 426 aaPredicted RBP12.34□□□□□ -0.43
SAMM50-201ENST00000350028 SONP18583 2426 aaKnown RBP12.33□□□□□ -0.44
SAMM50-201ENST00000350028 CCL24O00175 119 aa12.33□□□□□ -0.44
SAMM50-201ENST00000350028 ZNF418Q8TF45 676 aaPredicted RBP12.33□□□□□ -0.44
SAMM50-201ENST00000350028 ZMAT4Q9H898 229 aa12.33□□□□□ -0.44
SAMM50-201ENST00000350028 MAP6D1Q9H9H5 199 aa12.33□□□□□ -0.44
SAMM50-201ENST00000350028 ODF1Q14990 250 aa12.32□□□□□ -0.44
SAMM50-201ENST00000350028 LINC01006Q8NI28 216 aa12.32□□□□□ -0.44
SAMM50-201ENST00000350028 JPT2Q9H910 190 aa12.32□□□□□ -0.44
SAMM50-201ENST00000350028 DKK2Q9UBU2 259 aa12.32□□□□□ -0.44
SAMM50-201ENST00000350028 TSSC4Q9Y5U2 329 aaPredicted RBP12.32□□□□□ -0.44
SAMM50-201ENST00000350028 CD300EQ496F6 205 aaPredicted RBP12.31□□□□□ -0.44
SAMM50-201ENST00000350028 ANKRD39Q53RE8 183 aa12.31□□□□□ -0.44
SAMM50-201ENST00000350028 SUMO4Q6EEV6 95 aa12.31□□□□□ -0.44
SAMM50-201ENST00000350028 ZMAT5Q9UDW3 170 aaKnown RBP12.31□□□□□ -0.44
SAMM50-201ENST00000350028 AGRNO00468 2067 aa12.31□□□□□ -0.44
SAMM50-201ENST00000350028 CUBNO60494 3623 aa12.31□□□□□ -0.44
SAMM50-201ENST00000350028 HIST2H2BDQ6DRA6 164 aa12.31□□□□□ -0.44
SAMM50-201ENST00000350028 SMR3AQ99954 134 aa12.31□□□□□ -0.44
SAMM50-201ENST00000350028 CSTL1Q9H114 145 aa12.31□□□□□ -0.44
SAMM50-201ENST00000350028 A0A087WWL8 130 aa12.3□□□□□ -0.44
SAMM50-201ENST00000350028 A0A1W2PRX2 142 aa12.3□□□□□ -0.44
SAMM50-201ENST00000350028 RBMY1BA6NDE4 496 aaKnown RBP12.3□□□□□ -0.44
SAMM50-201ENST00000350028 RBMY1EA6NEQ0 496 aaKnown RBP12.3□□□□□ -0.44
SAMM50-201ENST00000350028 CBY3A6NI87 242 aa12.3□□□□□ -0.44
SAMM50-201ENST00000350028 F5H697 171 aa12.3□□□□□ -0.44
SAMM50-201ENST00000350028 RBMY1DP0C7P1 496 aaKnown RBP12.3□□□□□ -0.44
SAMM50-201ENST00000350028 HINT1P49773 126 aaPredicted RBP12.3□□□□□ -0.44
SAMM50-201ENST00000350028 C11orf44Q8N8P7 122 aa12.3□□□□□ -0.44
SAMM50-201ENST00000350028 TOMM6Q96B49 74 aa12.3□□□□□ -0.44
SAMM50-201ENST00000350028 CLUHP3Q96NS8 147 aa12.3□□□□□ -0.44
SAMM50-201ENST00000350028 CITED2Q99967 270 aaPredicted RBP12.3□□□□□ -0.44
SAMM50-201ENST00000350028 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.29□□□□□ -0.44
SAMM50-201ENST00000350028 G0S2P27469 103 aa12.29□□□□□ -0.44
SAMM50-201ENST00000350028 HILS1P60008 231 aa12.29□□□□□ -0.44
SAMM50-201ENST00000350028 STPG4Q8N801 248 aa12.29□□□□□ -0.44
SAMM50-201ENST00000350028 ZNF256Q9Y2P7 627 aaPredicted RBP12.29□□□□□ -0.44
SAMM50-201ENST00000350028 TRBV6-5A0A0K0K1A5 114 aa12.28□□□□□ -0.44
SAMM50-201ENST00000350028 DPM2O94777 84 aa12.28□□□□□ -0.44
SAMM50-201ENST00000350028 IGKCP01834 107 aa12.28□□□□□ -0.44
SAMM50-201ENST00000350028 CRYGDP07320 174 aa12.28□□□□□ -0.44
SAMM50-201ENST00000350028 RBMY1A1P0DJD3 496 aaKnown RBP12.28□□□□□ -0.44
SAMM50-201ENST00000350028 RBMY1CP0DJD4 496 aa12.28□□□□□ -0.44
SAMM50-201ENST00000350028 POLR2KP53803 58 aaKnown RBP12.28□□□□□ -0.44
SAMM50-201ENST00000350028 RBMY1FQ15415 496 aaKnown RBP12.28□□□□□ -0.44
SAMM50-201ENST00000350028 LINC01549A6NIU2 74 aa12.28□□□□□ -0.44
SAMM50-201ENST00000350028 VCYO14598 125 aa12.28□□□□□ -0.44
SAMM50-201ENST00000350028 ZNF124Q15973 351 aa12.28□□□□□ -0.44
SAMM50-201ENST00000350028 SCGB3A1Q96QR1 104 aa12.28□□□□□ -0.44
SAMM50-201ENST00000350028 A0A087WX48 190 aa12.27□□□□□ -0.45
SAMM50-201ENST00000350028 TRAV12-1A0A0B4J245 112 aa12.27□□□□□ -0.45
SAMM50-201ENST00000350028 NDUFA7O95182 113 aa12.27□□□□□ -0.45
SAMM50-201ENST00000350028 ZNF876PQ49A33 203 aa12.27□□□□□ -0.45
SAMM50-201ENST00000350028 LINC00467Q9BRT7 94 aa12.27□□□□□ -0.45
SAMM50-201ENST00000350028 TP73-AS1Q9UF72 201 aa12.27□□□□□ -0.45
SAMM50-201ENST00000350028 DLEU1O43261 78 aa12.26□□□□□ -0.45
SAMM50-201ENST00000350028 FGF6P10767 208 aa12.26□□□□□ -0.45
SAMM50-201ENST00000350028 C2orf66Q6UXQ4 117 aa12.26□□□□□ -0.45
SAMM50-201ENST00000350028 C12orf54Q6X4T0 127 aa12.26□□□□□ -0.45
SAMM50-201ENST00000350028 BOD1L2Q8IYS8 172 aa12.26□□□□□ -0.45
SAMM50-201ENST00000350028 LINC00469Q8N7U9 141 aa12.26□□□□□ -0.45
SAMM50-201ENST00000350028 ZNF56Q15929 161 aa12.25□□□□□ -0.45
SAMM50-201ENST00000350028 FAM74A4Q5TZK3 123 aa12.25□□□□□ -0.45
SAMM50-201ENST00000350028 JMJD8Q96S16 334 aa12.25□□□□□ -0.45
SAMM50-201ENST00000350028 HHLA3Q9XRX5 114 aa12.25□□□□□ -0.45
SAMM50-201ENST00000350028 MTORP42345 2549 aa12.25□□□□□ -0.45
SAMM50-201ENST00000350028 PIK3CD-AS1Q5SR53 167 aa12.25□□□□□ -0.45
SAMM50-201ENST00000350028 PTH2Q96A98 100 aa12.25□□□□□ -0.45
SAMM50-201ENST00000350028 KIR2DL4Q99706 377 aa12.25□□□□□ -0.45
SAMM50-201ENST00000350028 SORL1Q92673 2214 aa12.24□□□□□ -0.45
SAMM50-201ENST00000350028 M0QY20 66 aa12.24□□□□□ -0.45
SAMM50-201ENST00000350028 SIVA1O15304 175 aa12.24□□□□□ -0.45
SAMM50-201ENST00000350028 CMC4P56277 68 aaPredicted RBP12.24□□□□□ -0.45
SAMM50-201ENST00000350028 ZNF415Q09FC8 603 aa12.24□□□□□ -0.45
SAMM50-201ENST00000350028 ODF3L2Q3SX64 289 aa12.24□□□□□ -0.45
SAMM50-201ENST00000350028 MPV17L2Q567V2 206 aa12.24□□□□□ -0.45
SAMM50-201ENST00000350028 C2orf91Q6ZV80 131 aa12.24□□□□□ -0.45
SAMM50-201ENST00000350028 ERASQ7Z444 233 aa12.24□□□□□ -0.45
SAMM50-201ENST00000350028 TRPT1Q86TN4 253 aaKnown RBP12.24□□□□□ -0.45
SAMM50-201ENST00000350028 MRPL35Q9NZE8 188 aaKnown RBP12.24□□□□□ -0.45
SAMM50-201ENST00000350028 NSD1Q96L73 2696 aaPredicted RBP12.24□□□□□ -0.45
SAMM50-201ENST00000350028 TRBV27A0A0K0K1C4 114 aa12.23□□□□□ -0.45
SAMM50-201ENST00000350028 SDHAF1A6NFY7 115 aa12.23□□□□□ -0.45
SAMM50-201ENST00000350028 H7C1H1 209 aa12.23□□□□□ -0.45
SAMM50-201ENST00000350028 INSP01308 110 aa12.23□□□□□ -0.45
SAMM50-201ENST00000350028 CYSLTR1Q9Y271 337 aa12.23□□□□□ -0.45
SAMM50-201ENST00000350028 MAST4O15021 2626 aa12.23□□□□□ -0.45
SAMM50-201ENST00000350028 PLNP26678 52 aa12.23□□□□□ -0.45
SAMM50-201ENST00000350028 BVES-AS1Q5T3Y7 98 aa12.23□□□□□ -0.45
SAMM50-201ENST00000350028 ZFP2Q6ZN57 461 aa12.23□□□□□ -0.45
SAMM50-201ENST00000350028 NEXN-AS1Q8NBZ9 246 aa12.23□□□□□ -0.45
SAMM50-201ENST00000350028 OR11H12B2RN74 326 aa12.22□□□□□ -0.45
SAMM50-201ENST00000350028 F8VRH5 84 aa12.22□□□□□ -0.45
SAMM50-201ENST00000350028 M0R2P5 195 aa12.22□□□□□ -0.45
SAMM50-201ENST00000350028 LY6G6DO95868 133 aa12.22□□□□□ -0.45
SAMM50-201ENST00000350028 HTN1P15515 57 aa12.22□□□□□ -0.45
SAMM50-201ENST00000350028 ZNF25P17030 456 aaPredicted RBP12.22□□□□□ -0.45
SAMM50-201ENST00000350028 NMUP48645 174 aa12.22□□□□□ -0.45
SAMM50-201ENST00000350028 NEGR1Q7Z3B1 354 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms