RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 PRSS47A8MTI9 375 aa7.92□□□□□ -1.14
ECM1-201ENST00000346569 SMKR1H3BMG3 65 aa7.92□□□□□ -1.14
ECM1-201ENST00000346569 M0R2P5 195 aa7.92□□□□□ -1.14
ECM1-201ENST00000346569 SERF1AO75920 110 aa7.92□□□□□ -1.14
ECM1-201ENST00000346569 SAMD5Q5TGI4 173 aa7.92□□□□□ -1.14
ECM1-201ENST00000346569 NIT1Q86X76 327 aa7.92□□□□□ -1.14
ECM1-201ENST00000346569 TMEM263Q8WUH6 116 aaKnown RBP7.92□□□□□ -1.14
ECM1-201ENST00000346569 RASL10AQ92737 203 aa7.92□□□□□ -1.14
ECM1-201ENST00000346569 AP1S3Q96PC3 154 aa7.92□□□□□ -1.14
ECM1-201ENST00000346569 PRKDCP78527 4128 aaKnown RBP7.91□□□□□ -1.14
ECM1-201ENST00000346569 PLAC8L1A1L4L8 177 aa7.91□□□□□ -1.14
ECM1-201ENST00000346569 A8MZ25 164 aa7.91□□□□□ -1.14
ECM1-201ENST00000346569 G3V4G9 280 aa7.91□□□□□ -1.14
ECM1-201ENST00000346569 IGHV4-30-4P0DP06 118 aa7.91□□□□□ -1.14
ECM1-201ENST00000346569 GATA1P15976 413 aaPredicted RBP7.91□□□□□ -1.14
ECM1-201ENST00000346569 NRACQ8N912 160 aa7.91□□□□□ -1.14
ECM1-201ENST00000346569 DNAH3Q8TD57 4116 aa7.91□□□□□ -1.14
ECM1-201ENST00000346569 MRAP2Q96G30 205 aa7.91□□□□□ -1.14
ECM1-201ENST00000346569 NDUFAF3Q9BU61 184 aa7.91□□□□□ -1.14
ECM1-201ENST00000346569 SAMD10Q9BYL1 202 aa7.91□□□□□ -1.14
ECM1-201ENST00000346569 LAMTOR2Q9Y2Q5 125 aa7.91□□□□□ -1.14
ECM1-201ENST00000346569 TNFRSF6BO95407 300 aa7.9□□□□□ -1.14
ECM1-201ENST00000346569 NPYP01303 97 aa7.9□□□□□ -1.14
ECM1-201ENST00000346569 LINC00614P0C842 121 aa7.9□□□□□ -1.14
ECM1-201ENST00000346569 DAZ2Q13117 558 aaKnown RBP7.9□□□□□ -1.14
ECM1-201ENST00000346569 PDZD11Q5EBL8 140 aa7.9□□□□□ -1.14
ECM1-201ENST00000346569 UFSP1Q6NVU6 142 aa7.9□□□□□ -1.14
ECM1-201ENST00000346569 HIST1H2BLQ99880 126 aa7.9□□□□□ -1.14
ECM1-201ENST00000346569 OVOL2Q9BRP0 275 aa7.9□□□□□ -1.14
ECM1-201ENST00000346569 A0A087WWL8 130 aa7.89□□□□□ -1.15
ECM1-201ENST00000346569 NCR2O95944 276 aa7.89□□□□□ -1.15
ECM1-201ENST00000346569 APOC4P55056 127 aa7.89□□□□□ -1.15
ECM1-201ENST00000346569 RRN3P1Q2M238 152 aa7.89□□□□□ -1.15
ECM1-201ENST00000346569 C16orf74Q96GX8 76 aa7.89□□□□□ -1.15
ECM1-201ENST00000346569 PACRGQ96M98 296 aaPredicted RBP7.89□□□□□ -1.15
ECM1-201ENST00000346569 X6R8D5 127 aa7.89□□□□□ -1.15
ECM1-201ENST00000346569 TRAV26-2A0A0B4J265 109 aa7.88□□□□□ -1.15
ECM1-201ENST00000346569 SMIM9A6NGZ8 99 aa7.88□□□□□ -1.15
ECM1-201ENST00000346569 A8MWV9 139 aa7.88□□□□□ -1.15
ECM1-201ENST00000346569 RS1O15537 224 aa7.88□□□□□ -1.15
ECM1-201ENST00000346569 SMIM17P0DL12 118 aa7.88□□□□□ -1.15
ECM1-201ENST00000346569 LGALS9BQ3B8N2 356 aa7.88□□□□□ -1.15
ECM1-201ENST00000346569 CHCHD1Q96BP2 118 aaKnown RBP7.88□□□□□ -1.15
ECM1-201ENST00000346569 IGLV2-18A0A075B6J9 118 aa7.87□□□□□ -1.15
ECM1-201ENST00000346569 LINC01546A6NGU7 62 aa7.87□□□□□ -1.15
ECM1-201ENST00000346569 FABP4P15090 132 aa7.87□□□□□ -1.15
ECM1-201ENST00000346569 S100A2P29034 98 aa7.87□□□□□ -1.15
ECM1-201ENST00000346569 IFI27P40305 119 aaPredicted RBP7.87□□□□□ -1.15
ECM1-201ENST00000346569 CFAP126Q5VTH2 177 aa7.87□□□□□ -1.15
ECM1-201ENST00000346569 PRSS3P2Q8NHM4 247 aa7.87□□□□□ -1.15
ECM1-201ENST00000346569 TMEM18Q96B42 140 aa7.87□□□□□ -1.15
ECM1-201ENST00000346569 EDA2RQ9HAV5 297 aa7.87□□□□□ -1.15
ECM1-201ENST00000346569 LOC389332A0A1B0GUA5 103 aa7.86□□□□□ -1.15
ECM1-201ENST00000346569 M0QY20 66 aa7.86□□□□□ -1.15
ECM1-201ENST00000346569 MGPP08493 103 aa7.86□□□□□ -1.15
ECM1-201ENST00000346569 SUMO4Q6EEV6 95 aa7.86□□□□□ -1.15
ECM1-201ENST00000346569 Q6ZWC4 215 aa7.86□□□□□ -1.15
ECM1-201ENST00000346569 C20orf78Q9BR46 151 aa7.86□□□□□ -1.15
ECM1-201ENST00000346569 NOP10Q9NPE3 64 aaKnown RBP7.86□□□□□ -1.15
ECM1-201ENST00000346569 MRPL16Q9NX20 251 aaKnown RBP7.86□□□□□ -1.15
ECM1-201ENST00000346569 PPP1R17O96001 155 aa7.86□□□□□ -1.15
ECM1-201ENST00000346569 ZFP2Q6ZN57 461 aa7.86□□□□□ -1.15
ECM1-201ENST00000346569 Q6ZTI0 123 aa7.86□□□□□ -1.15
ECM1-201ENST00000346569 FAM19A2Q8N3H0 131 aa7.86□□□□□ -1.15
ECM1-201ENST00000346569 OR10D4PQ8NGN7 298 aa7.86□□□□□ -1.15
ECM1-201ENST00000346569 RNF183Q96D59 192 aa7.86□□□□□ -1.15
ECM1-201ENST00000346569 RPL39LQ96EH5 51 aaKnown RBP7.86□□□□□ -1.15
ECM1-201ENST00000346569 MAP1LC3AQ9H492 121 aa7.86□□□□□ -1.15
ECM1-201ENST00000346569 TRGV1A0A0A0MS02 117 aa7.85□□□□□ -1.15
ECM1-201ENST00000346569 TRBV6-5A0A0K0K1A5 114 aa7.85□□□□□ -1.15
ECM1-201ENST00000346569 F5H697 171 aa7.85□□□□□ -1.15
ECM1-201ENST00000346569 HSBP1O75506 76 aa7.85□□□□□ -1.15
ECM1-201ENST00000346569 PMCHP20382 165 aa7.85□□□□□ -1.15
ECM1-201ENST00000346569 AKR1D1P51857 326 aa7.85□□□□□ -1.15
ECM1-201ENST00000346569 POLR2KP53803 58 aaKnown RBP7.85□□□□□ -1.15
ECM1-201ENST00000346569 RPL32P62910 135 aaKnown RBP7.85□□□□□ -1.15
ECM1-201ENST00000346569 DEFB135Q30KP9 77 aa7.85□□□□□ -1.15
ECM1-201ENST00000346569 KPRPQ5T749 579 aaPredicted RBP7.85□□□□□ -1.15
ECM1-201ENST00000346569 FAM74A4Q5TZK3 123 aa7.85□□□□□ -1.15
ECM1-201ENST00000346569 RNASEKQ6P5S7 137 aaKnown RBP7.85□□□□□ -1.15
ECM1-201ENST00000346569 Q6ZSN1 163 aa7.85□□□□□ -1.15
ECM1-201ENST00000346569 LINC00612Q8N6U2 182 aa7.85□□□□□ -1.15
ECM1-201ENST00000346569 Q8N8P6 123 aa7.85□□□□□ -1.15
ECM1-201ENST00000346569 NXT2Q9NPJ8 142 aaKnown RBP7.85□□□□□ -1.15
ECM1-201ENST00000346569 AP5S1Q9NUS5 200 aa7.85□□□□□ -1.15
ECM1-201ENST00000346569 AMTP48728 403 aa7.84□□□□□ -1.15
ECM1-201ENST00000346569 SUMO2P61956 95 aaKnown RBP7.84□□□□□ -1.15
ECM1-201ENST00000346569 FA2HQ7L5A8 372 aa7.84□□□□□ -1.15
ECM1-201ENST00000346569 OR11H2Q8NH07 326 aa7.84□□□□□ -1.15
ECM1-201ENST00000346569 NIT2Q9NQR4 276 aa7.84□□□□□ -1.15
ECM1-201ENST00000346569 NACAE9PAV3 2078 aa7.83□□□□□ -1.16
ECM1-201ENST00000346569 A0A096LNJ9 63 aa7.83□□□□□ -1.16
ECM1-201ENST00000346569 IGHV3-73A0A0B4J1V6 119 aa7.83□□□□□ -1.16
ECM1-201ENST00000346569 TRAV4A0A0B4J268 109 aa7.83□□□□□ -1.16
ECM1-201ENST00000346569 RHODO00212 210 aa7.83□□□□□ -1.16
ECM1-201ENST00000346569 CIDEAO60543 219 aa7.83□□□□□ -1.16
ECM1-201ENST00000346569 IGHV3-53P01767 116 aa7.83□□□□□ -1.16
ECM1-201ENST00000346569 ZNF56Q15929 161 aa7.83□□□□□ -1.16
ECM1-201ENST00000346569 ZNF479Q96JC4 524 aa7.83□□□□□ -1.16
ECM1-201ENST00000346569 IGHV1-24A0A0C4DH33 117 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms