RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 RNF151Q2KHN1 245 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 OR11H1Q8NG94 326 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 OR11H2Q8NH07 326 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 WFDC12Q8WWY7 111 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 JPT2Q9H910 190 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 NAV2Q8IVL1 2488 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 A0A0J9YX75 114 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 LINC01549A6NIU2 74 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 K7ERJ3 54 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 K7ERU9 68 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 POLR2KP53803 58 aaKnown RBP10.85□□□□□ -0.67
TDP2-201ENST00000341060 SUMO4Q6EEV6 95 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 NHP2Q9NX24 153 aaKnown RBP10.85□□□□□ -0.67
TDP2-201ENST00000341060 CYSLTR1Q9Y271 337 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 FASNP49327 2511 aaKnown RBP10.85□□□□□ -0.67
TDP2-201ENST00000341060 ZANQ9Y493 2812 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 PRSS29PA6NIE9 313 aa10.84□□□□□ -0.67
TDP2-201ENST00000341060 LINC01619G3V211 115 aa10.84□□□□□ -0.67
TDP2-201ENST00000341060 C9orf85Q96MD7 179 aa10.84□□□□□ -0.67
TDP2-201ENST00000341060 MYMXA0A1B0GTQ4 84 aa10.84□□□□□ -0.67
TDP2-201ENST00000341060 E9PLD3 99 aa10.84□□□□□ -0.67
TDP2-201ENST00000341060 K7EQG2 157 aa10.84□□□□□ -0.67
TDP2-201ENST00000341060 DUSP14O95147 198 aaKnown RBP10.84□□□□□ -0.67
TDP2-201ENST00000341060 NEGR1Q7Z3B1 354 aa10.84□□□□□ -0.67
TDP2-201ENST00000341060 CR1P17927 2039 aa10.83□□□□□ -0.67
TDP2-201ENST00000341060 A0A087WWL8 130 aa10.83□□□□□ -0.68
TDP2-201ENST00000341060 IGHV3-16A0A0C4DH30 117 aa10.83□□□□□ -0.68
TDP2-201ENST00000341060 ZFP2Q6ZN57 461 aa10.83□□□□□ -0.68
TDP2-201ENST00000341060 LGALS9O00182 355 aa10.82□□□□□ -0.68
TDP2-201ENST00000341060 LGALS1P09382 135 aaKnown RBP10.82□□□□□ -0.68
TDP2-201ENST00000341060 HIST1H4GQ99525 98 aa10.82□□□□□ -0.68
TDP2-201ENST00000341060 KIR2DL4Q99706 377 aa10.82□□□□□ -0.68
TDP2-201ENST00000341060 VPREB3Q9UKI3 123 aa10.82□□□□□ -0.68
TDP2-201ENST00000341060 TP53TG1Q9Y2A0 90 aa10.82□□□□□ -0.68
TDP2-201ENST00000341060 TRBV7-3A0A075B6L6 115 aa10.82□□□□□ -0.68
TDP2-201ENST00000341060 TRAV12-2A0A075B6T6 113 aa10.82□□□□□ -0.68
TDP2-201ENST00000341060 VCYO14598 125 aa10.82□□□□□ -0.68
TDP2-201ENST00000341060 TGFAP01135 160 aa10.82□□□□□ -0.68
TDP2-201ENST00000341060 CRYGDP07320 174 aa10.82□□□□□ -0.68
TDP2-201ENST00000341060 TRBV6-5A0A0K0K1A5 114 aa10.81□□□□□ -0.68
TDP2-201ENST00000341060 TRBV27A0A0K0K1C4 114 aa10.81□□□□□ -0.68
TDP2-201ENST00000341060 IGIPA6NJ69 53 aa10.81□□□□□ -0.68
TDP2-201ENST00000341060 F5H697 171 aa10.81□□□□□ -0.68
TDP2-201ENST00000341060 TSHBP01222 138 aa10.81□□□□□ -0.68
TDP2-201ENST00000341060 SYNJ2BPP57105 145 aa10.81□□□□□ -0.68
TDP2-201ENST00000341060 Q8N1Y9 231 aa10.81□□□□□ -0.68
TDP2-201ENST00000341060 SORL1Q92673 2214 aa10.81□□□□□ -0.68
TDP2-201ENST00000341060 SDHAF1A6NFY7 115 aa10.81□□□□□ -0.68
TDP2-201ENST00000341060 ELANEP08246 267 aa10.81□□□□□ -0.68
TDP2-201ENST00000341060 VPS25Q9BRG1 176 aa10.81□□□□□ -0.68
TDP2-201ENST00000341060 PRADC1Q9BSG0 188 aa10.81□□□□□ -0.68
TDP2-201ENST00000341060 MDFICQ9P1T7 246 aa10.81□□□□□ -0.68
TDP2-201ENST00000341060 MXRA5Q9NR99 2828 aa10.8□□□□□ -0.68
TDP2-201ENST00000341060 IGKV3-20P01619 116 aa10.8□□□□□ -0.68
TDP2-201ENST00000341060 FAM74A4Q5TZK3 123 aa10.8□□□□□ -0.68
TDP2-201ENST00000341060 SYT8Q8NBV8 401 aa10.8□□□□□ -0.68
TDP2-201ENST00000341060 TIMM17AQ99595 171 aa10.8□□□□□ -0.68
TDP2-201ENST00000341060 ITPR2Q14571 2701 aa10.8□□□□□ -0.68
TDP2-201ENST00000341060 HECTD1Q9ULT8 2610 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 IGLV4-69A0A075B6H9 119 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 IGHV1OR15-1A0A075B7D0 117 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 FSHBP01225 129 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 RIPPLY3P57055 190 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 SPINK13Q1W4C9 94 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 C12orf74Q32Q52 190 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 PAPPA-AS1Q5QFB9 102 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 MAPK1IP1LQ8NDC0 245 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 TMEM141Q96I45 108 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 UBE2E2Q96LR5 201 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 IGLL5B9A064 214 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 SAP30O75446 220 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 HOXD3P31249 432 aaPredicted RBP10.79□□□□□ -0.68
TDP2-201ENST00000341060 RPL39P62891 51 aaKnown RBP10.79□□□□□ -0.68
TDP2-201ENST00000341060 PMVKQ15126 192 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 C21orf62-AS1Q17RA5 79 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 Q6YL49 198 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 ZNF702PQ9H963 129 aa10.79□□□□□ -0.68
TDP2-201ENST00000341060 RNF152Q8N8N0 203 aa10.78□□□□□ -0.68
TDP2-201ENST00000341060 ZNF469Q96JG9 3925 aaPredicted RBP10.78□□□□□ -0.68
TDP2-201ENST00000341060 A0A1B0GWB2 263 aa10.78□□□□□ -0.68
TDP2-201ENST00000341060 C11orf86A6NJI1 115 aa10.78□□□□□ -0.68
TDP2-201ENST00000341060 M0QY20 66 aa10.78□□□□□ -0.68
TDP2-201ENST00000341060 ZNF56Q15929 161 aa10.78□□□□□ -0.68
TDP2-201ENST00000341060 FOXI2Q6ZQN5 318 aa10.78□□□□□ -0.68
TDP2-201ENST00000341060 UNC79Q9P2D8 2635 aa10.77□□□□□ -0.69
TDP2-201ENST00000341060 ZNF815PA8K554 130 aa10.77□□□□□ -0.69
TDP2-201ENST00000341060 MORN3Q6PF18 240 aaPredicted RBP10.77□□□□□ -0.69
TDP2-201ENST00000341060 AMTNQ6UX39 209 aa10.77□□□□□ -0.69
TDP2-201ENST00000341060 ZNF479Q96JC4 524 aa10.77□□□□□ -0.69
TDP2-201ENST00000341060 PRRC2AP48634 2157 aaKnown RBP10.77□□□□□ -0.69
TDP2-201ENST00000341060 SCGB2A2Q13296 93 aa10.76□□□□□ -0.69
TDP2-201ENST00000341060 DEFB104AQ8WTQ1 72 aa10.76□□□□□ -0.69
TDP2-201ENST00000341060 DUX5Q96PT3 197 aa10.76□□□□□ -0.69
TDP2-201ENST00000341060 CCDC168Q8NDH2 2452 aa10.76□□□□□ -0.69
TDP2-201ENST00000341060 G3V4G9 280 aa10.75□□□□□ -0.69
TDP2-201ENST00000341060 HERVK_113P61574 105 aa10.75□□□□□ -0.69
TDP2-201ENST00000341060 NSUN5P1Q3KNT7 163 aa10.75□□□□□ -0.69
TDP2-201ENST00000341060 CD300EQ496F6 205 aaPredicted RBP10.75□□□□□ -0.69
TDP2-201ENST00000341060 TRPT1Q86TN4 253 aaKnown RBP10.75□□□□□ -0.69
TDP2-201ENST00000341060 RHOHQ15669 191 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms