RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 IGHV7-4-1A0A0J9YVY3 117 aa12.57□□□□□ -0.4
CDC42EP4-201ENST00000335793 HLA-DRB4P13762 266 aa12.57□□□□□ -0.4
CDC42EP4-201ENST00000335793 ASIPP42127 132 aa12.57□□□□□ -0.4
CDC42EP4-201ENST00000335793 SRSF2Q01130 221 aaKnown RBP12.57□□□□□ -0.4
CDC42EP4-201ENST00000335793 MOB4Q9Y3A3 225 aa12.57□□□□□ -0.4
CDC42EP4-201ENST00000335793 HLA-DRB4X5D2U9 266 aa12.57□□□□□ -0.4
CDC42EP4-201ENST00000335793 ANKRD29Q8N6D5 301 aa12.57□□□□□ -0.4
CDC42EP4-201ENST00000335793 RPL39LQ96EH5 51 aaKnown RBP12.57□□□□□ -0.4
CDC42EP4-201ENST00000335793 TRAV21A0A0B4J279 112 aa12.57□□□□□ -0.4
CDC42EP4-201ENST00000335793 LMO4P61968 165 aa12.57□□□□□ -0.4
CDC42EP4-201ENST00000335793 C9orf139Q6ZV77 190 aa12.57□□□□□ -0.4
CDC42EP4-201ENST00000335793 CELSR1Q9NYQ6 3014 aa12.56□□□□□ -0.4
CDC42EP4-201ENST00000335793 SCGB1D4Q6XE38 83 aa12.56□□□□□ -0.4
CDC42EP4-201ENST00000335793 C20orf173Q96LM9 149 aa12.56□□□□□ -0.4
CDC42EP4-201ENST00000335793 GNRH2O43555 120 aa12.56□□□□□ -0.4
CDC42EP4-201ENST00000335793 IGKV3-20P01619 116 aa12.56□□□□□ -0.4
CDC42EP4-201ENST00000335793 C9orf47Q6ZRZ4 202 aa12.56□□□□□ -0.4
CDC42EP4-201ENST00000335793 CHCHD5Q9BSY4 110 aa12.56□□□□□ -0.4
CDC42EP4-201ENST00000335793 MORN3Q6PF18 240 aaPredicted RBP12.56□□□□□ -0.4
CDC42EP4-201ENST00000335793 SMIM2Q9BVW6 85 aa12.56□□□□□ -0.4
CDC42EP4-201ENST00000335793 EMP1P54849 157 aa12.55□□□□□ -0.4
CDC42EP4-201ENST00000335793 SUMO2P61956 95 aaKnown RBP12.55□□□□□ -0.4
CDC42EP4-201ENST00000335793 NRACQ8N912 160 aa12.55□□□□□ -0.4
CDC42EP4-201ENST00000335793 TEN1Q86WV5 123 aa12.55□□□□□ -0.4
CDC42EP4-201ENST00000335793 RHODO00212 210 aa12.54□□□□□ -0.4
CDC42EP4-201ENST00000335793 PSMG4Q5JS54 123 aa12.54□□□□□ -0.4
CDC42EP4-201ENST00000335793 RAX2Q96IS3 184 aa12.54□□□□□ -0.4
CDC42EP4-201ENST00000335793 A8MWV9 139 aa12.54□□□□□ -0.4
CDC42EP4-201ENST00000335793 LINC00477Q96M19 166 aa12.54□□□□□ -0.4
CDC42EP4-201ENST00000335793 LRRK2Q5S007 2527 aa12.54□□□□□ -0.4
CDC42EP4-201ENST00000335793 H3BUX3 64 aa12.54□□□□□ -0.4
CDC42EP4-201ENST00000335793 FLNCQ14315 2725 aa12.53□□□□□ -0.4
CDC42EP4-201ENST00000335793 H7C1H1 209 aa12.53□□□□□ -0.4
CDC42EP4-201ENST00000335793 HIGD1BQ9P298 99 aa12.53□□□□□ -0.4
CDC42EP4-201ENST00000335793 ORMDL2Q53FV1 153 aa12.53□□□□□ -0.4
CDC42EP4-201ENST00000335793 FAM74A4Q5TZK3 123 aa12.53□□□□□ -0.4
CDC42EP4-201ENST00000335793 DPH3P1Q9H4G8 78 aa12.53□□□□□ -0.4
CDC42EP4-201ENST00000335793 PLNP26678 52 aa12.52□□□□□ -0.4
CDC42EP4-201ENST00000335793 IGLV2-18A0A075B6J9 118 aa12.52□□□□□ -0.41
CDC42EP4-201ENST00000335793 BLCAPP62952 87 aa12.52□□□□□ -0.41
CDC42EP4-201ENST00000335793 C2orf66Q6UXQ4 117 aa12.52□□□□□ -0.41
CDC42EP4-201ENST00000335793 RHPN1-AS1Q9BWJ2 59 aa12.52□□□□□ -0.41
CDC42EP4-201ENST00000335793 F8VRH5 84 aa12.52□□□□□ -0.41
CDC42EP4-201ENST00000335793 OVOL1O14753 267 aa12.51□□□□□ -0.41
CDC42EP4-201ENST00000335793 LINC00694P0DN24 101 aa12.51□□□□□ -0.41
CDC42EP4-201ENST00000335793 FAM223BA6NKX1 122 aa12.51□□□□□ -0.41
CDC42EP4-201ENST00000335793 TCL1BO95988 128 aa12.51□□□□□ -0.41
CDC42EP4-201ENST00000335793 FAM223AQ8IWN6 122 aa12.51□□□□□ -0.41
CDC42EP4-201ENST00000335793 MRPL53Q96EL3 112 aaKnown RBP12.51□□□□□ -0.41
CDC42EP4-201ENST00000335793 ZMAT4Q9H898 229 aa12.51□□□□□ -0.41
CDC42EP4-201ENST00000335793 CSDC2Q9Y534 153 aaKnown RBP12.51□□□□□ -0.41
CDC42EP4-201ENST00000335793 A0A087WWL8 130 aa12.5□□□□□ -0.41
CDC42EP4-201ENST00000335793 IGHV1-69DA0A0B4J2H0 117 aa12.5□□□□□ -0.41
CDC42EP4-201ENST00000335793 IGHV1-69P01742 117 aa12.5□□□□□ -0.41
CDC42EP4-201ENST00000335793 IGHV4-38-2P0DP08 117 aa12.5□□□□□ -0.41
CDC42EP4-201ENST00000335793 C9JAW5 83 aa12.5□□□□□ -0.41
CDC42EP4-201ENST00000335793 C19orf84I3L1E1 186 aa12.49□□□□□ -0.41
CDC42EP4-201ENST00000335793 ZFAND2AQ8N6M9 145 aa12.49□□□□□ -0.41
CDC42EP4-201ENST00000335793 RASL10AQ92737 203 aa12.49□□□□□ -0.41
CDC42EP4-201ENST00000335793 CD7P09564 240 aa12.49□□□□□ -0.41
CDC42EP4-201ENST00000335793 C15orf53Q8NAA6 179 aa12.49□□□□□ -0.41
CDC42EP4-201ENST00000335793 ZNF815PA8K554 130 aa12.48□□□□□ -0.41
CDC42EP4-201ENST00000335793 IGHV4-39P01824 125 aa12.48□□□□□ -0.41
CDC42EP4-201ENST00000335793 PRB1P04280 392 aa12.48□□□□□ -0.41
CDC42EP4-201ENST00000335793 HTN1P15515 57 aa12.48□□□□□ -0.41
CDC42EP4-201ENST00000335793 GNLYP22749 145 aa12.48□□□□□ -0.41
CDC42EP4-201ENST00000335793 CRIP2P52943 208 aaPredicted RBP12.48□□□□□ -0.41
CDC42EP4-201ENST00000335793 BEX4Q9NWD9 120 aaPredicted RBP12.48□□□□□ -0.41
CDC42EP4-201ENST00000335793 KLK5Q9Y337 293 aaPredicted RBP12.48□□□□□ -0.41
CDC42EP4-201ENST00000335793 POLQO75417 2590 aa12.48□□□□□ -0.41
CDC42EP4-201ENST00000335793 USP9XQ93008 2570 aaPredicted RBP12.48□□□□□ -0.41
CDC42EP4-201ENST00000335793 TRAV12-3A0A0B4J271 114 aa12.48□□□□□ -0.41
CDC42EP4-201ENST00000335793 IGHV4-61A0A0C4DH41 118 aa12.48□□□□□ -0.41
CDC42EP4-201ENST00000335793 NDUFA4O00483 81 aa12.48□□□□□ -0.41
CDC42EP4-201ENST00000335793 TRPT1Q86TN4 253 aaKnown RBP12.48□□□□□ -0.41
CDC42EP4-201ENST00000335793 JPT2Q9H910 190 aa12.48□□□□□ -0.41
CDC42EP4-201ENST00000335793 TMEM262E9PQX1 116 aa12.47□□□□□ -0.41
CDC42EP4-201ENST00000335793 ATP6V0E2Q8NHE4 81 aa12.47□□□□□ -0.41
CDC42EP4-201ENST00000335793 U3KQE9 123 aa12.47□□□□□ -0.41
CDC42EP4-201ENST00000335793 ZNF256Q9Y2P7 627 aaPredicted RBP12.47□□□□□ -0.41
CDC42EP4-201ENST00000335793 UTP20O75691 2785 aaKnown RBP12.47□□□□□ -0.41
CDC42EP4-201ENST00000335793 Q6ZS46 218 aa12.47□□□□□ -0.41
CDC42EP4-201ENST00000335793 PSMG3-AS1Q96PY0 264 aa12.47□□□□□ -0.41
CDC42EP4-201ENST00000335793 PRADC1Q9BSG0 188 aa12.47□□□□□ -0.41
CDC42EP4-201ENST00000335793 PIMREGQ9BSJ6 248 aa12.47□□□□□ -0.41
CDC42EP4-201ENST00000335793 MYMXA0A1B0GTQ4 84 aa12.46□□□□□ -0.41
CDC42EP4-201ENST00000335793 PIFOQ8TCI5 191 aa12.46□□□□□ -0.41
CDC42EP4-201ENST00000335793 NTN5Q8WTR8 489 aaPredicted RBP12.46□□□□□ -0.41
CDC42EP4-201ENST00000335793 TMEM170BQ5T4T1 132 aa12.46□□□□□ -0.42
CDC42EP4-201ENST00000335793 KLHL30-AS1Q8NEE0 82 aa12.46□□□□□ -0.42
CDC42EP4-201ENST00000335793 SLC25A16P16260 332 aa12.45□□□□□ -0.42
CDC42EP4-201ENST00000335793 LENEPQ9Y5L5 61 aa12.45□□□□□ -0.42
CDC42EP4-201ENST00000335793 NOTCH2Q04721 2471 aa12.45□□□□□ -0.42
CDC42EP4-201ENST00000335793 DUSP14O95147 198 aaKnown RBP12.45□□□□□ -0.42
CDC42EP4-201ENST00000335793 LINC01546A6NGU7 62 aa12.44□□□□□ -0.42
CDC42EP4-201ENST00000335793 MYO9AB2RTY4 2548 aa12.44□□□□□ -0.42
CDC42EP4-201ENST00000335793 EDN2P20800 178 aa12.44□□□□□ -0.42
CDC42EP4-201ENST00000335793 C5orf47Q569G3 176 aa12.44□□□□□ -0.42
CDC42EP4-201ENST00000335793 GPHB5Q86YW7 130 aa12.44□□□□□ -0.42
CDC42EP4-201ENST00000335793 ITLN2Q8WWU7 325 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms