RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 NPSP0C0P6 89 aa10.22□□□□□ -0.77
TRAK1-201ENST00000327628 HIGD2BQ4VC39 106 aa10.22□□□□□ -0.77
TRAK1-201ENST00000327628 DEFB136Q30KP8 78 aa10.22□□□□□ -0.77
TRAK1-201ENST00000327628 RNASE13Q5GAN3 156 aaKnown RBP10.22□□□□□ -0.77
TRAK1-201ENST00000327628 BLCAPP62952 87 aa10.21□□□□□ -0.77
TRAK1-201ENST00000327628 GRNP28799 593 aaKnown RBP10.21□□□□□ -0.78
TRAK1-201ENST00000327628 ATP5EP2Q5VTU8 51 aa10.21□□□□□ -0.78
TRAK1-201ENST00000327628 ODF3L1Q8IXM7 274 aa10.21□□□□□ -0.78
TRAK1-201ENST00000327628 CNOT1A5YKK6 2376 aaKnown RBP10.21□□□□□ -0.78
TRAK1-201ENST00000327628 A0A0J9YXY3 114 aa10.21□□□□□ -0.78
TRAK1-201ENST00000327628 C19orf71A6NCJ1 209 aa10.21□□□□□ -0.78
TRAK1-201ENST00000327628 SPRY2O43597 315 aa10.21□□□□□ -0.78
TRAK1-201ENST00000327628 IGHV3-30P01768 117 aa10.21□□□□□ -0.78
TRAK1-201ENST00000327628 IGHV3-33P01772 117 aa10.21□□□□□ -0.78
TRAK1-201ENST00000327628 IGHV3-30-3P0DP02 117 aa10.21□□□□□ -0.78
TRAK1-201ENST00000327628 IGHV3-30-5P0DP03 117 aa10.21□□□□□ -0.78
TRAK1-201ENST00000327628 WT1P19544 449 aaPredicted RBP10.2□□□□□ -0.78
TRAK1-201ENST00000327628 COX7BP24311 80 aa10.2□□□□□ -0.78
TRAK1-201ENST00000327628 DEFB105AQ8NG35 78 aa10.2□□□□□ -0.78
TRAK1-201ENST00000327628 PCP2Q8IVA1 136 aa10.2□□□□□ -0.78
TRAK1-201ENST00000327628 PRORYQ9H606 182 aa10.2□□□□□ -0.78
TRAK1-201ENST00000327628 FANCD2OSQ96PS1 177 aa10.19□□□□□ -0.78
TRAK1-201ENST00000327628 MUC7Q8TAX7 377 aa10.19□□□□□ -0.78
TRAK1-201ENST00000327628 MAP6D1Q9H9H5 199 aa10.19□□□□□ -0.78
TRAK1-201ENST00000327628 TRIOBPQ9H2D6 2365 aa10.19□□□□□ -0.78
TRAK1-201ENST00000327628 SPTBN2O15020 2390 aa10.18□□□□□ -0.78
TRAK1-201ENST00000327628 MRAPQ8TCY5 172 aa10.18□□□□□ -0.78
TRAK1-201ENST00000327628 FANCMQ8IYD8 2048 aa10.18□□□□□ -0.78
TRAK1-201ENST00000327628 MDC1Q14676 2089 aaKnown RBP10.18□□□□□ -0.78
TRAK1-201ENST00000327628 SEC61GP60059 68 aa10.18□□□□□ -0.78
TRAK1-201ENST00000327628 MIAQ16674 131 aa10.18□□□□□ -0.78
TRAK1-201ENST00000327628 Q6YL49 198 aa10.18□□□□□ -0.78
TRAK1-201ENST00000327628 HELZP42694 1942 aaKnown RBP10.17□□□□□ -0.78
TRAK1-201ENST00000327628 SEM1Q6ZVN7 128 aa10.17□□□□□ -0.78
TRAK1-201ENST00000327628 P0C879 139 aa10.17□□□□□ -0.78
TRAK1-201ENST00000327628 HILS1P60008 231 aa10.17□□□□□ -0.78
TRAK1-201ENST00000327628 PROP1O75360 226 aa10.17□□□□□ -0.78
TRAK1-201ENST00000327628 GTSF1Q8WW33 167 aa10.17□□□□□ -0.78
TRAK1-201ENST00000327628 EBI3Q14213 229 aa10.17□□□□□ -0.78
TRAK1-201ENST00000327628 GATA1P15976 413 aaPredicted RBP10.16□□□□□ -0.78
TRAK1-201ENST00000327628 ZFP36P26651 326 aaKnown RBP10.16□□□□□ -0.78
TRAK1-201ENST00000327628 TMEM61Q8N0U2 210 aa10.16□□□□□ -0.78
TRAK1-201ENST00000327628 SPTBN1Q01082 2364 aaKnown RBP10.16□□□□□ -0.78
TRAK1-201ENST00000327628 DNAJC9-AS1A6NH13 148 aa10.16□□□□□ -0.78
TRAK1-201ENST00000327628 SHISA2Q6UWI4 295 aa10.16□□□□□ -0.78
TRAK1-201ENST00000327628 MED12Q93074 2177 aa10.16□□□□□ -0.78
TRAK1-201ENST00000327628 SPRNQ5BIV9 151 aa10.16□□□□□ -0.78
TRAK1-201ENST00000327628 C11orf1Q9H5F2 150 aa10.16□□□□□ -0.78
TRAK1-201ENST00000327628 TRBV12-3P01733 135 aa10.15□□□□□ -0.78
TRAK1-201ENST00000327628 MIFP14174 115 aa10.15□□□□□ -0.78
TRAK1-201ENST00000327628 ODF1Q14990 250 aa10.15□□□□□ -0.78
TRAK1-201ENST00000327628 RITA1Q96K30 269 aa10.15□□□□□ -0.78
TRAK1-201ENST00000327628 ANKRD39Q53RE8 183 aa10.15□□□□□ -0.79
TRAK1-201ENST00000327628 C11orf45Q8TAV5 145 aa10.15□□□□□ -0.79
TRAK1-201ENST00000327628 LINC00643Q86TS7 51 aa10.14□□□□□ -0.79
TRAK1-201ENST00000327628 NFE4Q86UQ8 179 aa10.14□□□□□ -0.79
TRAK1-201ENST00000327628 J3KT08 172 aa10.14□□□□□ -0.79
TRAK1-201ENST00000327628 ANAPC1Q9H1A4 1944 aa10.14□□□□□ -0.79
TRAK1-201ENST00000327628 ZFAND2AQ8N6M9 145 aa10.14□□□□□ -0.79
TRAK1-201ENST00000327628 MYO7BQ6PIF6 2116 aa10.14□□□□□ -0.79
TRAK1-201ENST00000327628 A0A1B0GXF2 115 aa10.13□□□□□ -0.79
TRAK1-201ENST00000327628 PRAC2D3DTV9 90 aa10.13□□□□□ -0.79
TRAK1-201ENST00000327628 WFDC9Q8NEX5 89 aa10.13□□□□□ -0.79
TRAK1-201ENST00000327628 CITED2Q99967 270 aaPredicted RBP10.13□□□□□ -0.79
TRAK1-201ENST00000327628 MYLKQ15746 1914 aa10.13□□□□□ -0.79
TRAK1-201ENST00000327628 IGLV2-14P01704 120 aa10.13□□□□□ -0.79
TRAK1-201ENST00000327628 HIST2H2BDQ6DRA6 164 aa10.13□□□□□ -0.79
TRAK1-201ENST00000327628 ROS1P08922 2347 aa10.13□□□□□ -0.79
TRAK1-201ENST00000327628 LECT2O14960 151 aa10.13□□□□□ -0.79
TRAK1-201ENST00000327628 IGLV10-54A0A075B6I4 117 aa10.13□□□□□ -0.79
TRAK1-201ENST00000327628 NCR3O14931 201 aa10.13□□□□□ -0.79
TRAK1-201ENST00000327628 LMO4P61968 165 aa10.13□□□□□ -0.79
TRAK1-201ENST00000327628 DEFB135Q30KP9 77 aa10.13□□□□□ -0.79
TRAK1-201ENST00000327628 MIR7-3HGQ8N6C7 128 aa10.13□□□□□ -0.79
TRAK1-201ENST00000327628 SPANXB1Q9NS25 103 aaPredicted RBP10.13□□□□□ -0.79
TRAK1-201ENST00000327628 K7EQG2 157 aa10.12□□□□□ -0.79
TRAK1-201ENST00000327628 PI4KAP42356 2102 aa10.12□□□□□ -0.79
TRAK1-201ENST00000327628 HEATR1Q9H583 2144 aaKnown RBP10.12□□□□□ -0.79
TRAK1-201ENST00000327628 IBA57-AS1B1ANH7 110 aa10.12□□□□□ -0.79
TRAK1-201ENST00000327628 MPDZO75970 2070 aa10.12□□□□□ -0.79
TRAK1-201ENST00000327628 LINC01548A6NM66 108 aa10.12□□□□□ -0.79
TRAK1-201ENST00000327628 MSRB1Q9NZV6 116 aa10.12□□□□□ -0.79
TRAK1-201ENST00000327628 KLK12Q9UKR0 248 aa10.12□□□□□ -0.79
TRAK1-201ENST00000327628 TP53BP1Q12888 1972 aaPredicted RBP10.12□□□□□ -0.79
TRAK1-201ENST00000327628 IGLC6P0CF74 106 aa10.12□□□□□ -0.79
TRAK1-201ENST00000327628 ZNF706Q9Y5V0 76 aaPredicted RBP10.11□□□□□ -0.79
TRAK1-201ENST00000327628 TRBV6-4A0A1B0GX49 114 aa10.11□□□□□ -0.79
TRAK1-201ENST00000327628 FOXI1Q12951 378 aa10.11□□□□□ -0.79
TRAK1-201ENST00000327628 CCDC140Q96MF4 163 aa10.1□□□□□ -0.79
TRAK1-201ENST00000327628 INTS1Q8N201 2190 aaKnown RBP10.1□□□□□ -0.79
TRAK1-201ENST00000327628 PIK3CD-AS1Q5SR53 167 aa10.1□□□□□ -0.79
TRAK1-201ENST00000327628 EP300Q09472 2414 aaPredicted RBP10.1□□□□□ -0.79
TRAK1-201ENST00000327628 TIMM17BO60830 172 aa10.1□□□□□ -0.79
TRAK1-201ENST00000327628 RPL39P62891 51 aaKnown RBP10.1□□□□□ -0.79
TRAK1-201ENST00000327628 FAM222AQ5U5X8 452 aa10.1□□□□□ -0.79
TRAK1-201ENST00000327628 PLA2G5P39877 138 aa10.1□□□□□ -0.79
TRAK1-201ENST00000327628 UPK3BQ9BT76 320 aa10.1□□□□□ -0.79
TRAK1-201ENST00000327628 IGHV4-31P0DP07 118 aa10.09□□□□□ -0.79
TRAK1-201ENST00000327628 FER1L5A0AVI2 2057 aa10.09□□□□□ -0.79
TRAK1-201ENST00000327628 IGKV1D-37A0A075B6S9 117 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms