RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 ATRQ13535 2644 aa11.85□□□□□ -0.51
SHISA2-201ENST00000319420 LGALS9O00182 355 aa11.85□□□□□ -0.51
SHISA2-201ENST00000319420 SNAI2O43623 268 aa11.85□□□□□ -0.51
SHISA2-201ENST00000319420 CD5LO43866 347 aa11.85□□□□□ -0.51
SHISA2-201ENST00000319420 CD300EQ496F6 205 aaPredicted RBP11.85□□□□□ -0.51
SHISA2-201ENST00000319420 SAMD13Q5VXD3 122 aa11.85□□□□□ -0.51
SHISA2-201ENST00000319420 RAX2Q96IS3 184 aa11.85□□□□□ -0.51
SHISA2-201ENST00000319420 NACAE9PAV3 2078 aa11.85□□□□□ -0.51
SHISA2-201ENST00000319420 RNF152Q8N8N0 203 aa11.85□□□□□ -0.51
SHISA2-201ENST00000319420 VWFP04275 2813 aa11.85□□□□□ -0.51
SHISA2-201ENST00000319420 GAGE12BA1L429 117 aa11.84□□□□□ -0.51
SHISA2-201ENST00000319420 KLLNB2CW77 178 aa11.84□□□□□ -0.51
SHISA2-201ENST00000319420 F5H697 171 aa11.84□□□□□ -0.51
SHISA2-201ENST00000319420 CACNG7P62955 275 aa11.84□□□□□ -0.51
SHISA2-201ENST00000319420 LINC01006Q8NI28 216 aa11.84□□□□□ -0.51
SHISA2-201ENST00000319420 FOXC2Q99958 501 aa11.84□□□□□ -0.51
SHISA2-201ENST00000319420 C7orf71A4D174 169 aa11.84□□□□□ -0.51
SHISA2-201ENST00000319420 NSUN5P1Q3KNT7 163 aa11.84□□□□□ -0.51
SHISA2-201ENST00000319420 ST20Q9HBF5 79 aa11.84□□□□□ -0.51
SHISA2-201ENST00000319420 NSD1Q96L73 2696 aaPredicted RBP11.84□□□□□ -0.51
SHISA2-201ENST00000319420 AMMECR1LQ6DCA0 310 aa11.83□□□□□ -0.52
SHISA2-201ENST00000319420 NRACQ8N912 160 aa11.83□□□□□ -0.52
SHISA2-201ENST00000319420 TEP1Q99973 2627 aaKnown RBP11.83□□□□□ -0.52
SHISA2-201ENST00000319420 Q8N1Y9 231 aa11.83□□□□□ -0.52
SHISA2-201ENST00000319420 SCRT2Q9NQ03 307 aa11.83□□□□□ -0.52
SHISA2-201ENST00000319420 PEMTQ9UBM1 199 aa11.83□□□□□ -0.52
SHISA2-201ENST00000319420 IFI27L1Q96BM0 104 aa11.82□□□□□ -0.52
SHISA2-201ENST00000319420 MRPS16Q9Y3D3 137 aaKnown RBP11.82□□□□□ -0.52
SHISA2-201ENST00000319420 IGLV2-18A0A075B6J9 118 aa11.82□□□□□ -0.52
SHISA2-201ENST00000319420 IGHV4-4A0A075B6R2 117 aa11.82□□□□□ -0.52
SHISA2-201ENST00000319420 CCL24O00175 119 aa11.82□□□□□ -0.52
SHISA2-201ENST00000319420 TMEM158Q8WZ71 300 aa11.82□□□□□ -0.52
SHISA2-201ENST00000319420 IGHV3OR16-12A0A075B7B8 117 aa11.81□□□□□ -0.52
SHISA2-201ENST00000319420 TENM1Q9UKZ4 2725 aa11.81□□□□□ -0.52
SHISA2-201ENST00000319420 DKK2Q9UBU2 259 aa11.81□□□□□ -0.52
SHISA2-201ENST00000319420 IGHV3-73A0A0B4J1V6 119 aa11.81□□□□□ -0.52
SHISA2-201ENST00000319420 NBEAL2Q6ZNJ1 2754 aa11.8□□□□□ -0.52
SHISA2-201ENST00000319420 SMIM17P0DL12 118 aa11.8□□□□□ -0.52
SHISA2-201ENST00000319420 TRAV26-1A0A087WT03 109 aa11.8□□□□□ -0.52
SHISA2-201ENST00000319420 TAX1BP3O14907 124 aa11.8□□□□□ -0.52
SHISA2-201ENST00000319420 RBMY1A1P0DJD3 496 aaKnown RBP11.8□□□□□ -0.52
SHISA2-201ENST00000319420 RBMY1CP0DJD4 496 aa11.8□□□□□ -0.52
SHISA2-201ENST00000319420 RBMY1FQ15415 496 aaKnown RBP11.8□□□□□ -0.52
SHISA2-201ENST00000319420 TMEM86BQ8N661 226 aa11.8□□□□□ -0.52
SHISA2-201ENST00000319420 ZNF418Q8TF45 676 aaPredicted RBP11.8□□□□□ -0.52
SHISA2-201ENST00000319420 LY6G6DO95868 133 aa11.79□□□□□ -0.52
SHISA2-201ENST00000319420 PRSS1P07477 247 aa11.79□□□□□ -0.52
SHISA2-201ENST00000319420 MPV17L2Q567V2 206 aa11.79□□□□□ -0.52
SHISA2-201ENST00000319420 SLC25A34Q6PIV7 304 aa11.79□□□□□ -0.52
SHISA2-201ENST00000319420 NXT2Q9NPJ8 142 aaKnown RBP11.79□□□□□ -0.52
SHISA2-201ENST00000319420 FCER1GP30273 86 aa11.79□□□□□ -0.52
SHISA2-201ENST00000319420 CRYBA4P53673 196 aa11.79□□□□□ -0.52
SHISA2-201ENST00000319420 DEFB114Q30KQ6 69 aa11.79□□□□□ -0.52
SHISA2-201ENST00000319420 TEX29Q8N6K0 151 aa11.79□□□□□ -0.52
SHISA2-201ENST00000319420 AP1S3Q96PC3 154 aa11.79□□□□□ -0.52
SHISA2-201ENST00000319420 DPH3P1Q9H4G8 78 aa11.79□□□□□ -0.52
SHISA2-201ENST00000319420 LINC01546A6NGU7 62 aa11.78□□□□□ -0.52
SHISA2-201ENST00000319420 FOXI2Q6ZQN5 318 aa11.78□□□□□ -0.52
SHISA2-201ENST00000319420 Q8N8P6 123 aa11.78□□□□□ -0.52
SHISA2-201ENST00000319420 F8P00451 2351 aa11.78□□□□□ -0.52
SHISA2-201ENST00000319420 G3V4G9 280 aa11.78□□□□□ -0.52
SHISA2-201ENST00000319420 LGALS9BQ3B8N2 356 aa11.78□□□□□ -0.52
SHISA2-201ENST00000319420 LGALS9CQ6DKI2 356 aa11.78□□□□□ -0.52
SHISA2-201ENST00000319420 RASL10AQ92737 203 aa11.78□□□□□ -0.52
SHISA2-201ENST00000319420 A0A1B0GV72 72 aa11.77□□□□□ -0.52
SHISA2-201ENST00000319420 RBMY1BA6NDE4 496 aaKnown RBP11.77□□□□□ -0.52
SHISA2-201ENST00000319420 RBMY1EA6NEQ0 496 aaKnown RBP11.77□□□□□ -0.52
SHISA2-201ENST00000319420 INAFM1C9JVW0 142 aa11.77□□□□□ -0.52
SHISA2-201ENST00000319420 RBMY1DP0C7P1 496 aaKnown RBP11.77□□□□□ -0.52
SHISA2-201ENST00000319420 NUDT3O95989 172 aa11.77□□□□□ -0.53
SHISA2-201ENST00000319420 MAP6D1Q9H9H5 199 aa11.77□□□□□ -0.53
SHISA2-201ENST00000319420 XCL2Q9UBD3 114 aa11.77□□□□□ -0.53
SHISA2-201ENST00000319420 IGHV1OR15-1A0A075B7D0 117 aa11.77□□□□□ -0.53
SHISA2-201ENST00000319420 ZNF56Q15929 161 aa11.76□□□□□ -0.53
SHISA2-201ENST00000319420 AMTNQ6UX39 209 aa11.76□□□□□ -0.53
SHISA2-201ENST00000319420 WFDC10AQ9H1F0 79 aa11.76□□□□□ -0.53
SHISA2-201ENST00000319420 H3BMM0 161 aa11.76□□□□□ -0.53
SHISA2-201ENST00000319420 DUSP14O95147 198 aaKnown RBP11.76□□□□□ -0.53
SHISA2-201ENST00000319420 ZNF876PQ49A33 203 aa11.76□□□□□ -0.53
SHISA2-201ENST00000319420 IGHV3-16A0A0C4DH30 117 aa11.75□□□□□ -0.53
SHISA2-201ENST00000319420 SUMO2P61956 95 aaKnown RBP11.75□□□□□ -0.53
SHISA2-201ENST00000319420 SMAGPQ0VAQ4 97 aa11.75□□□□□ -0.53
SHISA2-201ENST00000319420 RNASE1P07998 156 aaKnown RBP11.75□□□□□ -0.53
SHISA2-201ENST00000319420 SHISA2Q6UWI4 295 aa11.75□□□□□ -0.53
SHISA2-201ENST00000319420 COX8AP10176 69 aa11.74□□□□□ -0.53
SHISA2-201ENST00000319420 GTSF1LQ9H1H1 148 aa11.74□□□□□ -0.53
SHISA2-201ENST00000319420 TRAV8-6A0A0B4J262 113 aa11.74□□□□□ -0.53
SHISA2-201ENST00000319420 AZU1P20160 251 aa11.74□□□□□ -0.53
SHISA2-201ENST00000319420 LAGE3Q14657 143 aa11.74□□□□□ -0.53
SHISA2-201ENST00000319420 C2orf91Q6ZV80 131 aa11.74□□□□□ -0.53
SHISA2-201ENST00000319420 ZNF256Q9Y2P7 627 aaPredicted RBP11.74□□□□□ -0.53
SHISA2-201ENST00000319420 SMIM2Q9BVW6 85 aa11.73□□□□□ -0.53
SHISA2-201ENST00000319420 TSSC4Q9Y5U2 329 aaPredicted RBP11.73□□□□□ -0.53
SHISA2-201ENST00000319420 TRBV7-9A0A0J9YWB2 115 aa11.73□□□□□ -0.53
SHISA2-201ENST00000319420 FGF6P10767 208 aa11.73□□□□□ -0.53
SHISA2-201ENST00000319420 HLA-DRB4P13762 266 aa11.73□□□□□ -0.53
SHISA2-201ENST00000319420 ODF1Q14990 250 aa11.73□□□□□ -0.53
SHISA2-201ENST00000319420 LINC01587Q99440 93 aa11.73□□□□□ -0.53
SHISA2-201ENST00000319420 HLA-DRB4X5D2U9 266 aa11.73□□□□□ -0.53
SHISA2-201ENST00000319420 TRRAPQ9Y4A5 3859 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms