RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 C10orf105Q8TEF2 133 aa13.24□□□□□ -0.29
GABRB3-202ENST00000311550 MBD6Q96DN6 1003 aa13.24□□□□□ -0.29
GABRB3-202ENST00000311550 RHOHQ15669 191 aa13.24□□□□□ -0.29
GABRB3-202ENST00000311550 LAMTOR3Q9UHA4 124 aa13.24□□□□□ -0.29
GABRB3-202ENST00000311550 LRP4O75096 1905 aa13.24□□□□□ -0.29
GABRB3-202ENST00000311550 HCFC1P51610 2035 aa13.23□□□□□ -0.29
GABRB3-202ENST00000311550 A0A096LPF7 62 aa13.23□□□□□ -0.29
GABRB3-202ENST00000311550 A0A0J9YXV3 536 aa13.22□□□□□ -0.29
GABRB3-202ENST00000311550 SRSF2Q01130 221 aaKnown RBP13.22□□□□□ -0.29
GABRB3-202ENST00000311550 TEX48A0A1B0GUV7 120 aa13.22□□□□□ -0.29
GABRB3-202ENST00000311550 ODF1Q14990 250 aa13.22□□□□□ -0.29
GABRB3-202ENST00000311550 BOD1L2Q8IYS8 172 aa13.22□□□□□ -0.29
GABRB3-202ENST00000311550 NXPH4O95158 308 aa13.22□□□□□ -0.29
GABRB3-202ENST00000311550 FBXL19-AS1Q494R0 122 aa13.22□□□□□ -0.29
GABRB3-202ENST00000311550 Q71RC1 249 aaPredicted RBP13.22□□□□□ -0.29
GABRB3-202ENST00000311550 Q8N1Y9 231 aa13.22□□□□□ -0.29
GABRB3-202ENST00000311550 PTPN13Q12923 2485 aa13.21□□□□□ -0.29
GABRB3-202ENST00000311550 CCDC140Q96MF4 163 aa13.21□□□□□ -0.29
GABRB3-202ENST00000311550 NOP10Q9NPE3 64 aaKnown RBP13.21□□□□□ -0.29
GABRB3-202ENST00000311550 RNF114Q9Y508 228 aa13.21□□□□□ -0.29
GABRB3-202ENST00000311550 ATRXP46100 2492 aa13.21□□□□□ -0.29
GABRB3-202ENST00000311550 ZNF48Q96MX3 618 aaPredicted RBP13.21□□□□□ -0.29
GABRB3-202ENST00000311550 IGF2RP11717 2491 aa13.21□□□□□ -0.3
GABRB3-202ENST00000311550 PRB1P04280 392 aa13.21□□□□□ -0.3
GABRB3-202ENST00000311550 IGHV4OR15-8A0A075B7B6 117 aa13.2□□□□□ -0.3
GABRB3-202ENST00000311550 A0A087WW49 117 aa13.2□□□□□ -0.3
GABRB3-202ENST00000311550 ODF3BA8MYP8 253 aa13.2□□□□□ -0.3
GABRB3-202ENST00000311550 CFC1BP0CG36 223 aa13.2□□□□□ -0.3
GABRB3-202ENST00000311550 CFC1P0CG37 223 aa13.2□□□□□ -0.3
GABRB3-202ENST00000311550 F5H768 121 aa13.2□□□□□ -0.3
GABRB3-202ENST00000311550 PCNTO95613 3336 aa13.19□□□□□ -0.3
GABRB3-202ENST00000311550 BAALCQ8WXS3 180 aa13.19□□□□□ -0.3
GABRB3-202ENST00000311550 CLPSL2Q6UWE3 100 aa13.19□□□□□ -0.3
GABRB3-202ENST00000311550 GHRHP01286 108 aa13.19□□□□□ -0.3
GABRB3-202ENST00000311550 CRYGBP07316 175 aa13.19□□□□□ -0.3
GABRB3-202ENST00000311550 HERVK_113P63121 156 aa13.19□□□□□ -0.3
GABRB3-202ENST00000311550 NTN5Q8WTR8 489 aaPredicted RBP13.19□□□□□ -0.3
GABRB3-202ENST00000311550 CARD19Q96LW7 228 aa13.19□□□□□ -0.3
GABRB3-202ENST00000311550 ATG2AQ2TAZ0 1938 aa13.18□□□□□ -0.3
GABRB3-202ENST00000311550 OVOL2Q9BRP0 275 aa13.17□□□□□ -0.3
GABRB3-202ENST00000311550 Q9H8V8 135 aa13.17□□□□□ -0.3
GABRB3-202ENST00000311550 IGHG2P01859 326 aa13.17□□□□□ -0.3
GABRB3-202ENST00000311550 NAV3Q8IVL0 2385 aa13.17□□□□□ -0.3
GABRB3-202ENST00000311550 DAD1P61803 113 aa13.17□□□□□ -0.3
GABRB3-202ENST00000311550 TOMM6Q96B49 74 aa13.17□□□□□ -0.3
GABRB3-202ENST00000311550 CRIP1P50238 77 aa13.16□□□□□ -0.3
GABRB3-202ENST00000311550 WFDC2Q14508 124 aa13.16□□□□□ -0.3
GABRB3-202ENST00000311550 CCL24O00175 119 aa13.16□□□□□ -0.3
GABRB3-202ENST00000311550 LMO4P61968 165 aa13.16□□□□□ -0.3
GABRB3-202ENST00000311550 A4D1N5 150 aa13.15□□□□□ -0.3
GABRB3-202ENST00000311550 MDFICQ9P1T7 246 aa13.15□□□□□ -0.3
GABRB3-202ENST00000311550 TLN1Q9Y490 2541 aaKnown RBP13.15□□□□□ -0.3
GABRB3-202ENST00000311550 C11orf86A6NJI1 115 aa13.15□□□□□ -0.3
GABRB3-202ENST00000311550 TRAV12-1A0A0B4J245 112 aa13.15□□□□□ -0.3
GABRB3-202ENST00000311550 HIGD1BQ9P298 99 aa13.15□□□□□ -0.3
GABRB3-202ENST00000311550 DSCAML1Q8TD84 2053 aa13.15□□□□□ -0.31
GABRB3-202ENST00000311550 SPATA12Q7Z6I5 190 aa13.15□□□□□ -0.31
GABRB3-202ENST00000311550 MUSTN1Q8IVN3 82 aa13.15□□□□□ -0.31
GABRB3-202ENST00000311550 MYCNOSP40205 109 aa13.14□□□□□ -0.31
GABRB3-202ENST00000311550 NCOR2Q9Y618 2525 aa13.14□□□□□ -0.31
GABRB3-202ENST00000311550 IGLC6P0CF74 106 aa13.14□□□□□ -0.31
GABRB3-202ENST00000311550 IGF1P05019 195 aa13.13□□□□□ -0.31
GABRB3-202ENST00000311550 OPRPNQ99935 248 aaPredicted RBP13.13□□□□□ -0.31
GABRB3-202ENST00000311550 EDA2RQ9HAV5 297 aa13.13□□□□□ -0.31
GABRB3-202ENST00000311550 EML5Q05BV3 1969 aa13.12□□□□□ -0.31
GABRB3-202ENST00000311550 LY6LH3BQJ8 138 aa13.12□□□□□ -0.31
GABRB3-202ENST00000311550 K7EMT4 169 aa13.12□□□□□ -0.31
GABRB3-202ENST00000311550 E9PLD3 99 aa13.12□□□□□ -0.31
GABRB3-202ENST00000311550 C19orf84I3L1E1 186 aa13.12□□□□□ -0.31
GABRB3-202ENST00000311550 SPANXA1Q9NS26 97 aa13.12□□□□□ -0.31
GABRB3-202ENST00000311550 GPHB5Q86YW7 130 aa13.12□□□□□ -0.31
GABRB3-202ENST00000311550 DAND5Q8N907 189 aa13.11□□□□□ -0.31
GABRB3-202ENST00000311550 DNAJC30Q96LL9 226 aa13.11□□□□□ -0.31
GABRB3-202ENST00000311550 XCL1P47992 114 aa13.11□□□□□ -0.31
GABRB3-202ENST00000311550 INAFM2P0DMQ5 153 aa13.11□□□□□ -0.31
GABRB3-202ENST00000311550 SPAG8Q99932 426 aaPredicted RBP13.11□□□□□ -0.31
GABRB3-202ENST00000311550 DEFB113Q30KQ7 82 aa13.11□□□□□ -0.31
GABRB3-202ENST00000311550 ARHGAP32A7KAX9 2087 aa13.1□□□□□ -0.31
GABRB3-202ENST00000311550 IGLV2-11P01706 119 aa13.1□□□□□ -0.31
GABRB3-202ENST00000311550 A0A0J9YY99 117 aa13.1□□□□□ -0.31
GABRB3-202ENST00000311550 A6NDX4 124 aa13.1□□□□□ -0.31
GABRB3-202ENST00000311550 ANGP03950 147 aaKnown RBP13.1□□□□□ -0.31
GABRB3-202ENST00000311550 C5orf38Q86SI9 138 aa13.09□□□□□ -0.31
GABRB3-202ENST00000311550 SMAD5-AS1Q9Y6J3 95 aa13.09□□□□□ -0.31
GABRB3-202ENST00000311550 DEFB121Q5J5C9 76 aa13.09□□□□□ -0.31
GABRB3-202ENST00000311550 C2CD3Q4AC94 2353 aa13.09□□□□□ -0.31
GABRB3-202ENST00000311550 SOCS3O14543 225 aa13.09□□□□□ -0.31
GABRB3-202ENST00000311550 MED14OSP0DP75 135 aa13.09□□□□□ -0.31
GABRB3-202ENST00000311550 A0A0J9YX75 114 aa13.08□□□□□ -0.32
GABRB3-202ENST00000311550 C20orf173Q96LM9 149 aa13.08□□□□□ -0.32
GABRB3-202ENST00000311550 TIMM17AQ99595 171 aa13.08□□□□□ -0.32
GABRB3-202ENST00000311550 TRAV13-2A0A0B4J235 113 aa13.07□□□□□ -0.32
GABRB3-202ENST00000311550 ZNF561-AS1K7EIQ3 104 aa13.07□□□□□ -0.32
GABRB3-202ENST00000311550 CEMP1Q6PRD7 247 aaPredicted RBP13.07□□□□□ -0.32
GABRB3-202ENST00000311550 Q6ZQT7 251 aa13.07□□□□□ -0.32
GABRB3-202ENST00000311550 ZFAND3Q9H8U3 227 aa13.07□□□□□ -0.32
GABRB3-202ENST00000311550 TMEM61Q8N0U2 210 aa13.06□□□□□ -0.32
GABRB3-202ENST00000311550 C15orf53Q8NAA6 179 aa13.06□□□□□ -0.32
GABRB3-202ENST00000311550 SLC25A29Q8N8R3 303 aa13.06□□□□□ -0.32
GABRB3-202ENST00000311550 SONP18583 2426 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms