RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 TRAV26-2A0A0B4J265 109 aa16.24■□□□□ 0.19
IRF3-201ENST00000309877 A8MWV9 139 aa16.24■□□□□ 0.19
IRF3-201ENST00000309877 RIPPLY3P57055 190 aa16.24■□□□□ 0.19
IRF3-201ENST00000309877 HIST3H2BBQ8N257 126 aa16.24■□□□□ 0.19
IRF3-201ENST00000309877 SAMD10Q9BYL1 202 aa16.24■□□□□ 0.19
IRF3-201ENST00000309877 A8MZ25 164 aa16.24■□□□□ 0.19
IRF3-201ENST00000309877 F5H697 171 aa16.24■□□□□ 0.19
IRF3-201ENST00000309877 S100A2P29034 98 aa16.24■□□□□ 0.19
IRF3-201ENST00000309877 LAMTOR2Q9Y2Q5 125 aa16.24■□□□□ 0.19
IRF3-201ENST00000309877 TRGV1A0A0A0MS02 117 aa16.23■□□□□ 0.19
IRF3-201ENST00000309877 SMIM9A6NGZ8 99 aa16.23■□□□□ 0.19
IRF3-201ENST00000309877 NPYP01303 97 aa16.23■□□□□ 0.19
IRF3-201ENST00000309877 CRYGDP07320 174 aa16.23■□□□□ 0.19
IRF3-201ENST00000309877 LINC00315P59091 139 aa16.23■□□□□ 0.19
IRF3-201ENST00000309877 DAZ2Q13117 558 aaKnown RBP16.23■□□□□ 0.19
IRF3-201ENST00000309877 POM121L12Q8N7R1 296 aa16.23■□□□□ 0.19
IRF3-201ENST00000309877 RASL10AQ92737 203 aa16.23■□□□□ 0.19
IRF3-201ENST00000309877 NOP10Q9NPE3 64 aaKnown RBP16.23■□□□□ 0.19
IRF3-201ENST00000309877 ANK2Q01484 3957 aa16.23■□□□□ 0.19
IRF3-201ENST00000309877 GAS8-AS1O95177 125 aa16.22■□□□□ 0.19
IRF3-201ENST00000309877 GATA1P15976 413 aaPredicted RBP16.22■□□□□ 0.19
IRF3-201ENST00000309877 NDUFAF3Q9BU61 184 aa16.22■□□□□ 0.19
IRF3-201ENST00000309877 NUPR1O60356 82 aa16.21■□□□□ 0.19
IRF3-201ENST00000309877 TNFRSF6BO95407 300 aa16.21■□□□□ 0.19
IRF3-201ENST00000309877 NIT1Q86X76 327 aa16.21■□□□□ 0.19
IRF3-201ENST00000309877 X6R8D5 127 aa16.21■□□□□ 0.19
IRF3-201ENST00000309877 LOC389332A0A1B0GUA5 103 aa16.21■□□□□ 0.18
IRF3-201ENST00000309877 PLAC8L1A1L4L8 177 aa16.21■□□□□ 0.18
IRF3-201ENST00000309877 LINC00310P59036 64 aa16.21■□□□□ 0.18
IRF3-201ENST00000309877 ZNF56Q15929 161 aa16.21■□□□□ 0.18
IRF3-201ENST00000309877 LGALS9BQ3B8N2 356 aa16.21■□□□□ 0.18
IRF3-201ENST00000309877 RNASEKQ6P5S7 137 aaKnown RBP16.21■□□□□ 0.18
IRF3-201ENST00000309877 PRSS3P2Q8NHM4 247 aa16.21■□□□□ 0.18
IRF3-201ENST00000309877 CMYA5Q8N3K9 4069 aa16.2■□□□□ 0.18
IRF3-201ENST00000309877 Q6ZWC4 215 aa16.2■□□□□ 0.18
IRF3-201ENST00000309877 MAP1LC3AQ9H492 121 aa16.2■□□□□ 0.18
IRF3-201ENST00000309877 PKD1L1Q8TDX9 2849 aa16.19■□□□□ 0.18
IRF3-201ENST00000309877 ESDP10768 282 aa16.19■□□□□ 0.18
IRF3-201ENST00000309877 EMP1P54849 157 aa16.19■□□□□ 0.18
IRF3-201ENST00000309877 CFAP126Q5VTH2 177 aa16.19■□□□□ 0.18
IRF3-201ENST00000309877 SUMO4Q6EEV6 95 aa16.19■□□□□ 0.18
IRF3-201ENST00000309877 OR11H2Q8NH07 326 aa16.19■□□□□ 0.18
IRF3-201ENST00000309877 OVOL2Q9BRP0 275 aa16.19■□□□□ 0.18
IRF3-201ENST00000309877 LINC00614P0C842 121 aa16.18■□□□□ 0.18
IRF3-201ENST00000309877 Q6ZTI0 123 aa16.18■□□□□ 0.18
IRF3-201ENST00000309877 NRACQ8N912 160 aa16.18■□□□□ 0.18
IRF3-201ENST00000309877 IGHV3-73A0A0B4J1V6 119 aa16.18■□□□□ 0.18
IRF3-201ENST00000309877 RS1O15537 224 aa16.18■□□□□ 0.18
IRF3-201ENST00000309877 PPP1R17O96001 155 aa16.18■□□□□ 0.18
IRF3-201ENST00000309877 FA2HQ7L5A8 372 aa16.18■□□□□ 0.18
IRF3-201ENST00000309877 RNF183Q96D59 192 aa16.18■□□□□ 0.18
IRF3-201ENST00000309877 RHODO00212 210 aa16.17■□□□□ 0.18
IRF3-201ENST00000309877 TMEM18Q96B42 140 aa16.17■□□□□ 0.18
IRF3-201ENST00000309877 CHCHD1Q96BP2 118 aaKnown RBP16.17■□□□□ 0.18
IRF3-201ENST00000309877 IFITM10A6NMD0 228 aa16.16■□□□□ 0.18
IRF3-201ENST00000309877 HSBP1O75506 76 aa16.16■□□□□ 0.18
IRF3-201ENST00000309877 FABP4P15090 132 aa16.16■□□□□ 0.18
IRF3-201ENST00000309877 IFI27P40305 119 aaPredicted RBP16.16■□□□□ 0.18
IRF3-201ENST00000309877 OR4C5Q8NGB2 326 aa16.16■□□□□ 0.18
IRF3-201ENST00000309877 URB1-AS1Q96HZ7 61 aa16.16■□□□□ 0.18
IRF3-201ENST00000309877 AKR1D1P51857 326 aa16.15■□□□□ 0.18
IRF3-201ENST00000309877 RPL39LQ96EH5 51 aaKnown RBP16.15■□□□□ 0.18
IRF3-201ENST00000309877 HIST1H2BLQ99880 126 aa16.15■□□□□ 0.18
IRF3-201ENST00000309877 UFSP1Q6NVU6 142 aa16.14■□□□□ 0.18
IRF3-201ENST00000309877 GAGE12BA1L429 117 aa16.14■□□□□ 0.17
IRF3-201ENST00000309877 GAGE7O76087 117 aa16.14■□□□□ 0.17
IRF3-201ENST00000309877 GAGE12FP0CL80 117 aa16.14■□□□□ 0.17
IRF3-201ENST00000309877 GAGE12GP0CL81 117 aa16.14■□□□□ 0.17
IRF3-201ENST00000309877 GAGE12IP0CL82 117 aa16.14■□□□□ 0.17
IRF3-201ENST00000309877 PMCHP20382 165 aa16.14■□□□□ 0.17
IRF3-201ENST00000309877 TRGV2A0A075B6R0 118 aa16.13■□□□□ 0.17
IRF3-201ENST00000309877 PRB2P02812 416 aaPredicted RBP16.13■□□□□ 0.17
IRF3-201ENST00000309877 MIFP14174 115 aa16.13■□□□□ 0.17
IRF3-201ENST00000309877 KPRPQ5T749 579 aaPredicted RBP16.13■□□□□ 0.17
IRF3-201ENST00000309877 ZFP2Q6ZN57 461 aa16.13■□□□□ 0.17
IRF3-201ENST00000309877 C20orf78Q9BR46 151 aa16.13■□□□□ 0.17
IRF3-201ENST00000309877 NXT2Q9NPJ8 142 aaKnown RBP16.13■□□□□ 0.17
IRF3-201ENST00000309877 AP5S1Q9NUS5 200 aa16.13■□□□□ 0.17
IRF3-201ENST00000309877 TRAV4A0A0B4J268 109 aa16.12■□□□□ 0.17
IRF3-201ENST00000309877 H7C1H1 209 aa16.12■□□□□ 0.17
IRF3-201ENST00000309877 M0QY20 66 aa16.12■□□□□ 0.17
IRF3-201ENST00000309877 AMTP48728 403 aa16.12■□□□□ 0.17
IRF3-201ENST00000309877 IGHV4-28A0A0C4DH34 117 aa16.11■□□□□ 0.17
IRF3-201ENST00000309877 PRSS47A8MTI9 375 aa16.11■□□□□ 0.17
IRF3-201ENST00000309877 SUMO2P61956 95 aaKnown RBP16.11■□□□□ 0.17
IRF3-201ENST00000309877 FAM19A2Q8N3H0 131 aa16.11■□□□□ 0.17
IRF3-201ENST00000309877 Q8N8P6 123 aa16.11■□□□□ 0.17
IRF3-201ENST00000309877 ST20Q9HBF5 79 aa16.11■□□□□ 0.17
IRF3-201ENST00000309877 IGHV3-53P01767 116 aa16.1■□□□□ 0.17
IRF3-201ENST00000309877 ZNF479Q96JC4 524 aa16.1■□□□□ 0.17
IRF3-201ENST00000309877 PACRGQ96M98 296 aaPredicted RBP16.1■□□□□ 0.17
IRF3-201ENST00000309877 TP53TG1Q9Y2A0 90 aa16.1■□□□□ 0.17
IRF3-201ENST00000309877 OR10D4PQ8NGN7 298 aa16.09■□□□□ 0.17
IRF3-201ENST00000309877 SMIM2Q9BVW6 85 aa16.08■□□□□ 0.17
IRF3-201ENST00000309877 EDA2RQ9HAV5 297 aa16.08■□□□□ 0.17
IRF3-201ENST00000309877 NIT2Q9NQR4 276 aa16.08■□□□□ 0.17
IRF3-201ENST00000309877 LYRM9A8MSI8 78 aa16.08■□□□□ 0.16
IRF3-201ENST00000309877 DEFB4AO15263 64 aa16.08■□□□□ 0.16
IRF3-201ENST00000309877 DEFB130BP0DP73 79 aa16.08■□□□□ 0.16
IRF3-201ENST00000309877 DEFB130AP0DP74 79 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms