RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 DAZ2Q13117 558 aaKnown RBP12.27□□□□□ -0.44
USP42-201ENST00000306177 DAZ4Q86SG3 579 aaKnown RBP12.27□□□□□ -0.44
USP42-201ENST00000306177 Q8N1Y9 231 aa12.27□□□□□ -0.44
USP42-201ENST00000306177 LINC00574Q9H8X3 128 aa12.27□□□□□ -0.44
USP42-201ENST00000306177 DAZ3Q9NR90 486 aaKnown RBP12.27□□□□□ -0.44
USP42-201ENST00000306177 BRCA2P51587 3418 aa12.27□□□□□ -0.44
USP42-201ENST00000306177 IGF2RP11717 2491 aa12.27□□□□□ -0.44
USP42-201ENST00000306177 FANCD2OSQ96PS1 177 aa12.27□□□□□ -0.44
USP42-201ENST00000306177 UBL5Q9BZL1 73 aa12.27□□□□□ -0.44
USP42-201ENST00000306177 TRAV25A0A0B4J276 109 aa12.27□□□□□ -0.45
USP42-201ENST00000306177 KIR2DL5BA0A0G2JN68 375 aa12.27□□□□□ -0.45
USP42-201ENST00000306177 KIR2DL5BA0A0G2JPC4 375 aa12.27□□□□□ -0.45
USP42-201ENST00000306177 TRBV6-1A0A0K0K1D8 114 aa12.27□□□□□ -0.45
USP42-201ENST00000306177 KIR2DL5AQ8N109 375 aa12.27□□□□□ -0.45
USP42-201ENST00000306177 GYPEP15421 78 aa12.27□□□□□ -0.45
USP42-201ENST00000306177 H3BMG7 143 aa12.26□□□□□ -0.45
USP42-201ENST00000306177 MED14OSP0DP75 135 aa12.26□□□□□ -0.45
USP42-201ENST00000306177 NUPR1O60356 82 aa12.26□□□□□ -0.45
USP42-201ENST00000306177 ATP5G1P05496 136 aa12.26□□□□□ -0.45
USP42-201ENST00000306177 LINC01545Q5VT33 79 aa12.26□□□□□ -0.45
USP42-201ENST00000306177 ATP6V0E2Q8NHE4 81 aa12.26□□□□□ -0.45
USP42-201ENST00000306177 A6NDX4 124 aa12.26□□□□□ -0.45
USP42-201ENST00000306177 CFC1BP0CG36 223 aa12.26□□□□□ -0.45
USP42-201ENST00000306177 CFC1P0CG37 223 aa12.26□□□□□ -0.45
USP42-201ENST00000306177 SPART-AS1P0CW21 52 aa12.26□□□□□ -0.45
USP42-201ENST00000306177 C22orf34Q6ZV56 151 aa12.26□□□□□ -0.45
USP42-201ENST00000306177 PRSS47A8MTI9 375 aa12.26□□□□□ -0.45
USP42-201ENST00000306177 CGB3P0DN86 165 aa12.26□□□□□ -0.45
USP42-201ENST00000306177 CGB7P0DN87 165 aa12.26□□□□□ -0.45
USP42-201ENST00000306177 MUC22E2RYF6 1773 aaPredicted RBP12.26□□□□□ -0.45
USP42-201ENST00000306177 MRPL23Q16540 153 aaKnown RBP12.25□□□□□ -0.45
USP42-201ENST00000306177 C4orf3Q8WVX3 66 aa12.25□□□□□ -0.45
USP42-201ENST00000306177 MRAPQ8TCY5 172 aa12.25□□□□□ -0.45
USP42-201ENST00000306177 MED12LQ86YW9 2145 aa12.25□□□□□ -0.45
USP42-201ENST00000306177 CTRLP40313 264 aa12.25□□□□□ -0.45
USP42-201ENST00000306177 Q6ZPA2 131 aa12.25□□□□□ -0.45
USP42-201ENST00000306177 PRORYQ9H606 182 aa12.25□□□□□ -0.45
USP42-201ENST00000306177 MYCNOSP40205 109 aa12.24□□□□□ -0.45
USP42-201ENST00000306177 LINC00173Q6ZV60 143 aa12.24□□□□□ -0.45
USP42-201ENST00000306177 CDPF1Q6NVV7 123 aa12.24□□□□□ -0.45
USP42-201ENST00000306177 CRIP3Q6Q6R5 217 aa12.24□□□□□ -0.45
USP42-201ENST00000306177 C5orf38Q86SI9 138 aa12.24□□□□□ -0.45
USP42-201ENST00000306177 ICOSQ9Y6W8 199 aa12.24□□□□□ -0.45
USP42-201ENST00000306177 ODF3BA8MYP8 253 aa12.24□□□□□ -0.45
USP42-201ENST00000306177 RBMY1FQ15415 496 aaKnown RBP12.24□□□□□ -0.45
USP42-201ENST00000306177 SH2D6Q7Z4S9 175 aa12.24□□□□□ -0.45
USP42-201ENST00000306177 DSCR8Q96T75 97 aa12.24□□□□□ -0.45
USP42-201ENST00000306177 RPL32P62910 135 aaKnown RBP12.24□□□□□ -0.45
USP42-201ENST00000306177 C9orf153Q5TBE3 101 aa12.24□□□□□ -0.45
USP42-201ENST00000306177 AMTNQ6UX39 209 aa12.24□□□□□ -0.45
USP42-201ENST00000306177 PROP1O75360 226 aa12.23□□□□□ -0.45
USP42-201ENST00000306177 C1orf43Q9BWL3 253 aa12.23□□□□□ -0.45
USP42-201ENST00000306177 A0A0J9YXV3 536 aa12.23□□□□□ -0.45
USP42-201ENST00000306177 LAMA2P24043 3122 aaKnown RBP12.23□□□□□ -0.45
USP42-201ENST00000306177 IGKV1D-37A0A075B6S9 117 aa12.23□□□□□ -0.45
USP42-201ENST00000306177 C10orf142B7Z368 130 aa12.23□□□□□ -0.45
USP42-201ENST00000306177 UNQ9165/PRO28630Q6UXU0 137 aa12.23□□□□□ -0.45
USP42-201ENST00000306177 LMO4P61968 165 aa12.23□□□□□ -0.45
USP42-201ENST00000306177 ZNF503Q96F45 646 aa12.23□□□□□ -0.45
USP42-201ENST00000306177 WNK1Q9H4A3 2382 aa12.22□□□□□ -0.45
USP42-201ENST00000306177 TNFRSF13BO14836 293 aaPredicted RBP12.22□□□□□ -0.45
USP42-201ENST00000306177 IFITM1P13164 125 aa12.22□□□□□ -0.45
USP42-201ENST00000306177 C19orf84I3L1E1 186 aa12.22□□□□□ -0.45
USP42-201ENST00000306177 TRBV12-3P01733 135 aa12.21□□□□□ -0.45
USP42-201ENST00000306177 HAMPP81172 84 aa12.21□□□□□ -0.45
USP42-201ENST00000306177 ANKRD39Q53RE8 183 aa12.21□□□□□ -0.45
USP42-201ENST00000306177 TRAV12-1A0A0B4J245 112 aa12.21□□□□□ -0.46
USP42-201ENST00000306177 BRWD1-AS2P59051 145 aa12.21□□□□□ -0.46
USP42-201ENST00000306177 LOXL1Q08397 574 aaPredicted RBP12.21□□□□□ -0.46
USP42-201ENST00000306177 DEFB125Q8N687 156 aa12.21□□□□□ -0.46
USP42-201ENST00000306177 Q9HAA7 133 aa12.21□□□□□ -0.46
USP42-201ENST00000306177 TRBV7-3A0A075B6L6 115 aa12.2□□□□□ -0.46
USP42-201ENST00000306177 C19orf71A6NCJ1 209 aa12.2□□□□□ -0.46
USP42-201ENST00000306177 NAV2Q8IVL1 2488 aa12.2□□□□□ -0.46
USP42-201ENST00000306177 CCDC168Q8NDH2 2452 aa12.2□□□□□ -0.46
USP42-201ENST00000306177 CLPSL1A2RUU4 121 aa12.2□□□□□ -0.46
USP42-201ENST00000306177 DEFB1P60022 68 aa12.2□□□□□ -0.46
USP42-201ENST00000306177 PIEZO2Q9H5I5 2752 aa12.19□□□□□ -0.46
USP42-201ENST00000306177 TOMM6Q96B49 74 aa12.19□□□□□ -0.46
USP42-201ENST00000306177 CHD3Q12873 2000 aaKnown RBP12.19□□□□□ -0.46
USP42-201ENST00000306177 TRAV4A0A0B4J268 109 aa12.19□□□□□ -0.46
USP42-201ENST00000306177 SPANXDQ9BXN6 97 aa12.19□□□□□ -0.46
USP42-201ENST00000306177 A0A0J9YX75 114 aa12.19□□□□□ -0.46
USP42-201ENST00000306177 FSTL3O95633 263 aa12.19□□□□□ -0.46
USP42-201ENST00000306177 RPL39P62891 51 aaKnown RBP12.19□□□□□ -0.46
USP42-201ENST00000306177 CCDC140Q96MF4 163 aa12.19□□□□□ -0.46
USP42-201ENST00000306177 COX7A2LO14548 114 aa12.18□□□□□ -0.46
USP42-201ENST00000306177 TMEM61Q8N0U2 210 aa12.18□□□□□ -0.46
USP42-201ENST00000306177 MYO18BQ8IUG5 2567 aa12.18□□□□□ -0.46
USP42-201ENST00000306177 NTN5Q8WTR8 489 aaPredicted RBP12.18□□□□□ -0.46
USP42-201ENST00000306177 TIMM17AQ99595 171 aa12.18□□□□□ -0.46
USP42-201ENST00000306177 IGHG4P01861 327 aa12.18□□□□□ -0.46
USP42-201ENST00000306177 Q6ZVH6 145 aa12.18□□□□□ -0.46
USP42-201ENST00000306177 HHLA3Q9XRX5 114 aa12.17□□□□□ -0.46
USP42-201ENST00000306177 TNCP24821 2201 aa12.17□□□□□ -0.46
USP42-201ENST00000306177 IGLV10-54A0A075B6I4 117 aa12.17□□□□□ -0.46
USP42-201ENST00000306177 BAALCQ8WXS3 180 aa12.17□□□□□ -0.46
USP42-201ENST00000306177 CAMK2N2Q96S95 79 aa12.17□□□□□ -0.46
USP42-201ENST00000306177 CEP192Q8TEP8 1941 aa12.17□□□□□ -0.46
USP42-201ENST00000306177 ALPK3Q96L96 1907 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms