RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 PRUNE2Q8WUY3 3088 aa10.18□□□□□ -0.78
DDX54-201ENST00000306014 ADORA2A-AS1P86434 159 aa10.18□□□□□ -0.78
DDX54-201ENST00000306014 TRAV12-1A0A0B4J245 112 aa10.18□□□□□ -0.78
DDX54-201ENST00000306014 CCDC140Q96MF4 163 aa10.18□□□□□ -0.78
DDX54-201ENST00000306014 TRBV12-3P01733 135 aa10.18□□□□□ -0.78
DDX54-201ENST00000306014 RASL10AQ92737 203 aa10.18□□□□□ -0.78
DDX54-201ENST00000306014 IGHV4-38-2P0DP08 117 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 TOMM6Q96B49 74 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 LY6LH3BQJ8 138 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 INSP01308 110 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 IGHV4-61A0A0C4DH41 118 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 C11orf86A6NJI1 115 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 E9PLD3 99 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 H3BMM0 161 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 CFC1BP0CG36 223 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 CFC1P0CG37 223 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 NTN5Q8WTR8 489 aaPredicted RBP10.17□□□□□ -0.78
DDX54-201ENST00000306014 UBE2WQ96B02 151 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 COL4A2P08572 1712 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 ODF3BA8MYP8 253 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 GATD1Q8NB37 220 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 JPT2Q9H910 190 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 SMAD5-AS1Q9Y6J3 95 aa10.17□□□□□ -0.78
DDX54-201ENST00000306014 A0A0J9YXV3 536 aa10.16□□□□□ -0.78
DDX54-201ENST00000306014 GAS8-AS1O95177 125 aa10.16□□□□□ -0.78
DDX54-201ENST00000306014 LGALS1P09382 135 aaKnown RBP10.16□□□□□ -0.78
DDX54-201ENST00000306014 SIRPDQ9H106 197 aa10.16□□□□□ -0.78
DDX54-201ENST00000306014 IGF1P05019 195 aa10.16□□□□□ -0.78
DDX54-201ENST00000306014 SRSF2Q01130 221 aaKnown RBP10.16□□□□□ -0.78
DDX54-201ENST00000306014 RNF185Q96GF1 192 aa10.16□□□□□ -0.78
DDX54-201ENST00000306014 A4D1N5 150 aa10.16□□□□□ -0.78
DDX54-201ENST00000306014 C1QTNF4Q9BXJ3 329 aa10.16□□□□□ -0.78
DDX54-201ENST00000306014 C11orf68Q9H3H3 251 aaKnown RBP10.16□□□□□ -0.78
DDX54-201ENST00000306014 U3KQK5 164 aa10.16□□□□□ -0.78
DDX54-201ENST00000306014 EPG5Q9HCE0 2579 aa10.15□□□□□ -0.78
DDX54-201ENST00000306014 MAPKAPK5-AS1Q8N8E1 139 aa10.15□□□□□ -0.78
DDX54-201ENST00000306014 LINC01356Q8N9X3 169 aa10.15□□□□□ -0.78
DDX54-201ENST00000306014 RBMY1BA6NDE4 496 aaKnown RBP10.14□□□□□ -0.79
DDX54-201ENST00000306014 RBMY1EA6NEQ0 496 aaKnown RBP10.14□□□□□ -0.79
DDX54-201ENST00000306014 CRPP02741 224 aa10.14□□□□□ -0.79
DDX54-201ENST00000306014 RBMY1DP0C7P1 496 aaKnown RBP10.14□□□□□ -0.79
DDX54-201ENST00000306014 RBMY1A1P0DJD3 496 aaKnown RBP10.14□□□□□ -0.79
DDX54-201ENST00000306014 RBMY1CP0DJD4 496 aa10.14□□□□□ -0.79
DDX54-201ENST00000306014 H3BUA1 57 aa10.14□□□□□ -0.79
DDX54-201ENST00000306014 RHODO00212 210 aa10.14□□□□□ -0.79
DDX54-201ENST00000306014 IGHV4-59P01825 116 aa10.14□□□□□ -0.79
DDX54-201ENST00000306014 PF4P02776 101 aa10.14□□□□□ -0.79
DDX54-201ENST00000306014 PTH2Q96A98 100 aa10.14□□□□□ -0.79
DDX54-201ENST00000306014 PAX4O43316 350 aa10.14□□□□□ -0.79
DDX54-201ENST00000306014 ZNRF2Q8NHG8 242 aa10.14□□□□□ -0.79
DDX54-201ENST00000306014 RHOHQ15669 191 aa10.14□□□□□ -0.79
DDX54-201ENST00000306014 RNF223E7ERA6 249 aa10.13□□□□□ -0.79
DDX54-201ENST00000306014 DNAH14Q0VDD8 3507 aa10.13□□□□□ -0.79
DDX54-201ENST00000306014 GAGE12JA6NER3 117 aa10.12□□□□□ -0.79
DDX54-201ENST00000306014 RPL35AP18077 110 aaKnown RBP10.12□□□□□ -0.79
DDX54-201ENST00000306014 GAGE4Q13068 117 aa10.12□□□□□ -0.79
DDX54-201ENST00000306014 GAGE5Q13069 117 aa10.12□□□□□ -0.79
DDX54-201ENST00000306014 FBXL19-AS1Q494R0 122 aa10.12□□□□□ -0.79
DDX54-201ENST00000306014 TM2D2Q9BX73 214 aa10.12□□□□□ -0.79
DDX54-201ENST00000306014 MUSTN1Q8IVN3 82 aa10.12□□□□□ -0.79
DDX54-201ENST00000306014 Q8N1Y9 231 aa10.12□□□□□ -0.79
DDX54-201ENST00000306014 SPAG8Q99932 426 aaPredicted RBP10.12□□□□□ -0.79
DDX54-201ENST00000306014 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.12□□□□□ -0.79
DDX54-201ENST00000306014 IGKV2-29A2NJV5 120 aaPredicted RBP10.12□□□□□ -0.79
DDX54-201ENST00000306014 FOXI1Q12951 378 aa10.12□□□□□ -0.79
DDX54-201ENST00000306014 OPRPNQ99935 248 aaPredicted RBP10.12□□□□□ -0.79
DDX54-201ENST00000306014 LEPROTO15243 131 aa10.12□□□□□ -0.79
DDX54-201ENST00000306014 FSTL3O95633 263 aa10.12□□□□□ -0.79
DDX54-201ENST00000306014 TEN1Q86WV5 123 aa10.12□□□□□ -0.79
DDX54-201ENST00000306014 ZFAND3Q9H8U3 227 aa10.12□□□□□ -0.79
DDX54-201ENST00000306014 DEFB112Q30KQ8 113 aa10.11□□□□□ -0.79
DDX54-201ENST00000306014 GATA3P23771 443 aa10.11□□□□□ -0.79
DDX54-201ENST00000306014 CFHR3Q02985 330 aa10.11□□□□□ -0.79
DDX54-201ENST00000306014 CARD19Q96LW7 228 aa10.11□□□□□ -0.79
DDX54-201ENST00000306014 HOXD3P31249 432 aaPredicted RBP10.1□□□□□ -0.79
DDX54-201ENST00000306014 DEFB136Q30KP8 78 aa10.1□□□□□ -0.79
DDX54-201ENST00000306014 CFAP161Q6P656 301 aa10.1□□□□□ -0.79
DDX54-201ENST00000306014 C11orf21Q9P2W6 132 aa10.1□□□□□ -0.79
DDX54-201ENST00000306014 HTN3P15516 51 aa10.1□□□□□ -0.79
DDX54-201ENST00000306014 SONP18583 2426 aaKnown RBP10.1□□□□□ -0.79
DDX54-201ENST00000306014 MDFICQ9P1T7 246 aa10.1□□□□□ -0.79
DDX54-201ENST00000306014 TLN2Q9Y4G6 2542 aa10.1□□□□□ -0.79
DDX54-201ENST00000306014 IGHV4-30-2A0A087WSY4 118 aa10.09□□□□□ -0.79
DDX54-201ENST00000306014 TNFRSF13BO14836 293 aaPredicted RBP10.09□□□□□ -0.79
DDX54-201ENST00000306014 GAGE2AQ6NT46 116 aa10.09□□□□□ -0.79
DDX54-201ENST00000306014 XIRP2A4UGR9 3374 aa10.09□□□□□ -0.79
DDX54-201ENST00000306014 HIVEP3Q5T1R4 2406 aa10.09□□□□□ -0.79
DDX54-201ENST00000306014 C20orf173Q96LM9 149 aa10.09□□□□□ -0.79
DDX54-201ENST00000306014 TIMM17AQ99595 171 aa10.09□□□□□ -0.79
DDX54-201ENST00000306014 USP9YO00507 2555 aaPredicted RBP10.09□□□□□ -0.79
DDX54-201ENST00000306014 TMEM86BQ8N661 226 aa10.09□□□□□ -0.79
DDX54-201ENST00000306014 LINC01619G3V211 115 aa10.08□□□□□ -0.8
DDX54-201ENST00000306014 C6orf226Q5I0X4 101 aa10.08□□□□□ -0.8
DDX54-201ENST00000306014 ANKRD29Q8N6D5 301 aa10.08□□□□□ -0.8
DDX54-201ENST00000306014 FASNP49327 2511 aaKnown RBP10.08□□□□□ -0.8
DDX54-201ENST00000306014 SZT2Q5T011 3432 aa10.08□□□□□ -0.8
DDX54-201ENST00000306014 ADAMTS20P59510 1910 aa10.08□□□□□ -0.8
DDX54-201ENST00000306014 TNRC6BQ9UPQ9 1833 aaKnown RBP10.08□□□□□ -0.8
DDX54-201ENST00000306014 MED14OSP0DP75 135 aa10.08□□□□□ -0.8
DDX54-201ENST00000306014 MALP21145 153 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms