RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 COX11Q9Y6N1 276 aa5.89□□□□□ -1.47
TM4SF1-201ENST00000305366 OR11H12B2RN74 326 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 USP17L23D6RBM5 183 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 G3V318 75 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 COX8AP10176 69 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 CKS2P33552 79 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 ATP5G2Q06055 141 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 TWIST1Q15672 202 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 IGFL4Q6B9Z1 124 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 CLEC19AQ6UXS0 136 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 ZNF738Q8NE65 137 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 OR11H1Q8NG94 326 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 OR1N2Q8NGR9 330 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 OR11H2Q8NH07 326 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 TRAV8-2A0A0B4J237 113 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 IGHV3-35A0A0C4DH35 117 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 PRAC2D3DTV9 90 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 NPYP01303 97 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 ORM1P02763 201 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 ERCC8Q13216 396 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 FAM106AQ4KMX7 169 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 C9orf66Q5T8R8 295 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 C9orf47Q6ZRZ4 202 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 AGPAT4-IT1Q9H0P7 198 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 KLK15Q9H2R5 256 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 MAP1LC3AQ9H492 121 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 LENEPQ9Y5L5 61 aa5.88□□□□□ -1.47
TM4SF1-201ENST00000305366 TENM3Q9P273 2699 aa5.87□□□□□ -1.47
TM4SF1-201ENST00000305366 IGHV3OR16-8A0A075B7F1 116 aa5.87□□□□□ -1.47
TM4SF1-201ENST00000305366 TRAV41A0A0B4J266 112 aa5.87□□□□□ -1.47
TM4SF1-201ENST00000305366 LOC389332A0A1B0GUA5 103 aa5.87□□□□□ -1.47
TM4SF1-201ENST00000305366 H3BUA1 57 aa5.87□□□□□ -1.47
TM4SF1-201ENST00000305366 NCR2O95944 276 aa5.87□□□□□ -1.47
TM4SF1-201ENST00000305366 NHLRC4P0CG21 123 aaPredicted RBP5.87□□□□□ -1.47
TM4SF1-201ENST00000305366 VPREB1P12018 145 aa5.87□□□□□ -1.47
TM4SF1-201ENST00000305366 PSMG4Q5JS54 123 aa5.87□□□□□ -1.47
TM4SF1-201ENST00000305366 BVES-AS1Q5T3Y7 98 aa5.87□□□□□ -1.47
TM4SF1-201ENST00000305366 KRTAP5-3Q6L8H2 238 aa5.87□□□□□ -1.47
TM4SF1-201ENST00000305366 DEFB125Q8N687 156 aa5.87□□□□□ -1.47
TM4SF1-201ENST00000305366 NXT2Q9NPJ8 142 aaKnown RBP5.87□□□□□ -1.47
TM4SF1-201ENST00000305366 IGHV4-4A0A075B6R2 117 aa5.86□□□□□ -1.47
TM4SF1-201ENST00000305366 IGKV3D-20A0A0C4DH25 116 aa5.86□□□□□ -1.47
TM4SF1-201ENST00000305366 IGF1P05019 195 aa5.86□□□□□ -1.47
TM4SF1-201ENST00000305366 ELANEP08246 267 aa5.86□□□□□ -1.47
TM4SF1-201ENST00000305366 RPL11P62913 178 aaKnown RBP5.86□□□□□ -1.47
TM4SF1-201ENST00000305366 UBE2V1Q13404 147 aa5.86□□□□□ -1.47
TM4SF1-201ENST00000305366 MPV17L2Q567V2 206 aa5.86□□□□□ -1.47
TM4SF1-201ENST00000305366 TMEM78Q5T7P6 136 aa5.86□□□□□ -1.47
TM4SF1-201ENST00000305366 RNF182Q8N6D2 247 aa5.86□□□□□ -1.47
TM4SF1-201ENST00000305366 IFI27L1Q96BM0 104 aa5.86□□□□□ -1.47
TM4SF1-201ENST00000305366 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
TM4SF1-201ENST00000305366 MUC21A0A0G2JKD1 596 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 MUC21A0A140T8X8 626 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 NUDT3O95989 172 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 FGF6P10767 208 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 MUC21Q5SSG8 566 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 C2orf91Q6ZV80 131 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 OR8A1Q8NGG7 326 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 C4orf3Q8WVX3 66 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 MSRB1Q9NZV6 116 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 ZNF256Q9Y2P7 627 aaPredicted RBP5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 TIMM8BQ9Y5J9 83 aaPredicted RBP5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 IGHV3-66A0A0C4DH42 116 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 IGHV7-4-1A0A0J9YVY3 117 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 SMKR1H3BMG3 65 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 NDUFA4O00483 81 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 TAX1BP3O14907 124 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 TSPAN13O95857 204 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 PSMB8P28062 276 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 FCER1GP30273 86 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 CACNG7P62955 275 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 FHL3Q13643 280 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 USMG5Q96IX5 58 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 C11orf21Q9P2W6 132 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 TP73-AS1Q9UF72 201 aa5.85□□□□□ -1.47
TM4SF1-201ENST00000305366 IGLV2-18A0A075B6J9 118 aa5.84□□□□□ -1.47
TM4SF1-201ENST00000305366 CCL25O15444 150 aa5.84□□□□□ -1.47
TM4SF1-201ENST00000305366 IGHV3-11P01762 117 aa5.84□□□□□ -1.47
TM4SF1-201ENST00000305366 TRGV3P03979 118 aa5.84□□□□□ -1.47
TM4SF1-201ENST00000305366 PPIFP30405 207 aaKnown RBP5.84□□□□□ -1.47
TM4SF1-201ENST00000305366 PTTG1IPP53801 180 aa5.84□□□□□ -1.47
TM4SF1-201ENST00000305366 SLURP1P55000 103 aa5.84□□□□□ -1.47
TM4SF1-201ENST00000305366 SEC11AP67812 179 aa5.84□□□□□ -1.47
TM4SF1-201ENST00000305366 CFHR3Q02985 330 aa5.84□□□□□ -1.47
TM4SF1-201ENST00000305366 SBSPONQ8IVN8 264 aa5.84□□□□□ -1.47
TM4SF1-201ENST00000305366 Q8N8P6 123 aa5.84□□□□□ -1.47
TM4SF1-201ENST00000305366 LINC00477Q96M19 166 aa5.84□□□□□ -1.47
TM4SF1-201ENST00000305366 COL7A1Q02388 2944 aa5.84□□□□□ -1.47
TM4SF1-201ENST00000305366 DNAH9Q9NYC9 4486 aa5.84□□□□□ -1.48
TM4SF1-201ENST00000305366 SOCS3O14543 225 aa5.83□□□□□ -1.48
TM4SF1-201ENST00000305366 OVOL1O14753 267 aa5.83□□□□□ -1.48
TM4SF1-201ENST00000305366 DLX4Q92988 240 aaPredicted RBP5.83□□□□□ -1.48
TM4SF1-201ENST00000305366 ZNF580Q9UK33 172 aa5.83□□□□□ -1.48
TM4SF1-201ENST00000305366 IGHV3OR16-13A0A075B7E8 117 aa5.83□□□□□ -1.48
TM4SF1-201ENST00000305366 IGHV3-49A0A0A0MS15 119 aa5.83□□□□□ -1.48
TM4SF1-201ENST00000305366 IGHV3-74A0A0B4J1X5 117 aa5.83□□□□□ -1.48
TM4SF1-201ENST00000305366 ZNF207O43670 478 aaKnown RBP5.83□□□□□ -1.48
TM4SF1-201ENST00000305366 ATP5LO75964 103 aa5.83□□□□□ -1.48
TM4SF1-201ENST00000305366 MED14OSP0DP75 135 aa5.83□□□□□ -1.48
TM4SF1-201ENST00000305366 KIR3DS1Q14943 382 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 208.1 ms