RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 RASL10AQ92737 203 aa9.99□□□□□ -0.81
TRIM35-201ENST00000305364 PRR30Q53SZ7 412 aaPredicted RBP9.98□□□□□ -0.81
TRIM35-201ENST00000305364 SVIPQ8NHG7 77 aa9.98□□□□□ -0.81
TRIM35-201ENST00000305364 TRBV7-1A0A0A6YYK4 115 aa9.98□□□□□ -0.81
TRIM35-201ENST00000305364 TMEM95Q3KNT9 176 aa9.98□□□□□ -0.81
TRIM35-201ENST00000305364 M0R2P5 195 aa9.97□□□□□ -0.81
TRIM35-201ENST00000305364 IGF1P05019 195 aa9.97□□□□□ -0.81
TRIM35-201ENST00000305364 TMEM141Q96I45 108 aa9.97□□□□□ -0.81
TRIM35-201ENST00000305364 CDIP1Q9H305 208 aa9.97□□□□□ -0.81
TRIM35-201ENST00000305364 A0A0J9YY99 117 aa9.97□□□□□ -0.81
TRIM35-201ENST00000305364 A0A0U1RRA0 63 aa9.97□□□□□ -0.81
TRIM35-201ENST00000305364 CD28P10747 220 aa9.96□□□□□ -0.81
TRIM35-201ENST00000305364 MINOS1Q5TGZ0 78 aa9.96□□□□□ -0.81
TRIM35-201ENST00000305364 PRO0461Q9UI25 63 aa9.96□□□□□ -0.81
TRIM35-201ENST00000305364 MINOS1-NBL1R4GNA1 71 aa9.96□□□□□ -0.81
TRIM35-201ENST00000305364 IGLV2-18A0A075B6J9 118 aa9.96□□□□□ -0.81
TRIM35-201ENST00000305364 TRAV8-3A0A0A6YYJ7 113 aa9.96□□□□□ -0.81
TRIM35-201ENST00000305364 OOSP1A8MZH6 123 aa9.96□□□□□ -0.81
TRIM35-201ENST00000305364 GNLYP22749 145 aa9.96□□□□□ -0.81
TRIM35-201ENST00000305364 ZNF876PQ49A33 203 aa9.96□□□□□ -0.81
TRIM35-201ENST00000305364 WDFY4Q6ZS81 3184 aa9.96□□□□□ -0.81
TRIM35-201ENST00000305364 IGHV7-4-1A0A0J9YVY3 117 aa9.96□□□□□ -0.82
TRIM35-201ENST00000305364 MUSTN1Q8IVN3 82 aa9.96□□□□□ -0.82
TRIM35-201ENST00000305364 SORL1Q92673 2214 aa9.96□□□□□ -0.82
TRIM35-201ENST00000305364 TRAV41A0A0B4J266 112 aa9.95□□□□□ -0.82
TRIM35-201ENST00000305364 C9orf47Q6ZRZ4 202 aa9.95□□□□□ -0.82
TRIM35-201ENST00000305364 GATA3P23771 443 aa9.95□□□□□ -0.82
TRIM35-201ENST00000305364 LINC01620Q4KN68 170 aa9.95□□□□□ -0.82
TRIM35-201ENST00000305364 MEIG1Q5JSS6 88 aa9.95□□□□□ -0.82
TRIM35-201ENST00000305364 C3orf56Q8N813 242 aa9.94□□□□□ -0.82
TRIM35-201ENST00000305364 TIMM21Q9BVV7 248 aa9.94□□□□□ -0.82
TRIM35-201ENST00000305364 SAA4P35542 130 aa9.94□□□□□ -0.82
TRIM35-201ENST00000305364 SMCPP49901 116 aaPredicted RBP9.94□□□□□ -0.82
TRIM35-201ENST00000305364 Q6ZS46 218 aa9.94□□□□□ -0.82
TRIM35-201ENST00000305364 IGHV1-69DA0A0B4J2H0 117 aa9.94□□□□□ -0.82
TRIM35-201ENST00000305364 NDUFV3P56181 108 aaKnown RBP9.94□□□□□ -0.82
TRIM35-201ENST00000305364 IGHV3-73A0A0B4J1V6 119 aa9.93□□□□□ -0.82
TRIM35-201ENST00000305364 LY6LH3BQJ8 138 aa9.93□□□□□ -0.82
TRIM35-201ENST00000305364 OVOL3O00110 214 aa9.93□□□□□ -0.82
TRIM35-201ENST00000305364 TNFRSF13BO14836 293 aaPredicted RBP9.93□□□□□ -0.82
TRIM35-201ENST00000305364 CIRBPQ14011 172 aaKnown RBP9.93□□□□□ -0.82
TRIM35-201ENST00000305364 Q8N1Y9 231 aa9.93□□□□□ -0.82
TRIM35-201ENST00000305364 MRPL53Q96EL3 112 aaKnown RBP9.93□□□□□ -0.82
TRIM35-201ENST00000305364 JPT2Q9H910 190 aa9.93□□□□□ -0.82
TRIM35-201ENST00000305364 LINC01619G3V211 115 aa9.93□□□□□ -0.82
TRIM35-201ENST00000305364 COX8CQ7Z4L0 72 aa9.93□□□□□ -0.82
TRIM35-201ENST00000305364 UBE2D1P51668 147 aa9.93□□□□□ -0.82
TRIM35-201ENST00000305364 CARD19Q96LW7 228 aa9.93□□□□□ -0.82
TRIM35-201ENST00000305364 OPRPNQ99935 248 aaPredicted RBP9.93□□□□□ -0.82
TRIM35-201ENST00000305364 IGHG4P01861 327 aa9.93□□□□□ -0.82
TRIM35-201ENST00000305364 Q8N9W7 124 aa9.93□□□□□ -0.82
TRIM35-201ENST00000305364 TEX49A0A1B0GTD5 131 aa9.92□□□□□ -0.82
TRIM35-201ENST00000305364 F8W735 103 aaPredicted RBP9.92□□□□□ -0.82
TRIM35-201ENST00000305364 SLC25A29Q8N8R3 303 aa9.92□□□□□ -0.82
TRIM35-201ENST00000305364 RHPN1-AS1Q9BWJ2 59 aa9.92□□□□□ -0.82
TRIM35-201ENST00000305364 LENEPQ9Y5L5 61 aa9.92□□□□□ -0.82
TRIM35-201ENST00000305364 TNFRSF18Q9Y5U5 241 aa9.92□□□□□ -0.82
TRIM35-201ENST00000305364 NACAE9PAV3 2078 aa9.92□□□□□ -0.82
TRIM35-201ENST00000305364 TRAV4A0A0B4J268 109 aa9.92□□□□□ -0.82
TRIM35-201ENST00000305364 SUMO4Q6EEV6 95 aa9.92□□□□□ -0.82
TRIM35-201ENST00000305364 ABCA12Q86UK0 2595 aa9.91□□□□□ -0.82
TRIM35-201ENST00000305364 A0A0J9YXV3 536 aa9.91□□□□□ -0.82
TRIM35-201ENST00000305364 HERV-K104P63124 156 aa9.91□□□□□ -0.82
TRIM35-201ENST00000305364 PRR9Q5T870 116 aa9.91□□□□□ -0.82
TRIM35-201ENST00000305364 MTORP42345 2549 aa9.9□□□□□ -0.82
TRIM35-201ENST00000305364 RNASE13Q5GAN3 156 aaKnown RBP9.9□□□□□ -0.82
TRIM35-201ENST00000305364 ZFAND3Q9H8U3 227 aa9.9□□□□□ -0.82
TRIM35-201ENST00000305364 IGHV3-30P01768 117 aa9.9□□□□□ -0.82
TRIM35-201ENST00000305364 IGHV3-30-5P0DP03 117 aa9.9□□□□□ -0.82
TRIM35-201ENST00000305364 UBE2D3P61077 147 aa9.9□□□□□ -0.82
TRIM35-201ENST00000305364 UBE2D2P62837 147 aa9.9□□□□□ -0.82
TRIM35-201ENST00000305364 HIVEP2P31629 2446 aa9.9□□□□□ -0.82
TRIM35-201ENST00000305364 LINC01548A6NM66 108 aa9.9□□□□□ -0.82
TRIM35-201ENST00000305364 GRNP28799 593 aaKnown RBP9.9□□□□□ -0.83
TRIM35-201ENST00000305364 CCDC140Q96MF4 163 aa9.9□□□□□ -0.83
TRIM35-201ENST00000305364 LEPROTO15243 131 aa9.89□□□□□ -0.83
TRIM35-201ENST00000305364 SNRPD3P62318 126 aaKnown RBP9.89□□□□□ -0.83
TRIM35-201ENST00000305364 NDUFA12Q9UI09 145 aa9.89□□□□□ -0.83
TRIM35-201ENST00000305364 TRAV12-2A0A075B6T6 113 aa9.89□□□□□ -0.83
TRIM35-201ENST00000305364 CRIP2P52943 208 aaPredicted RBP9.89□□□□□ -0.83
TRIM35-201ENST00000305364 DUX3Q96PT4 197 aa9.89□□□□□ -0.83
TRIM35-201ENST00000305364 CCDC179H3BU77 68 aa9.89□□□□□ -0.83
TRIM35-201ENST00000305364 TMEM101Q96IK0 257 aa9.89□□□□□ -0.83
TRIM35-201ENST00000305364 C2CD3Q4AC94 2353 aa9.89□□□□□ -0.83
TRIM35-201ENST00000305364 LINC01546A6NGU7 62 aa9.88□□□□□ -0.83
TRIM35-201ENST00000305364 DOPEY1Q5JWR5 2465 aa9.88□□□□□ -0.83
TRIM35-201ENST00000305364 IGHV3-33P01772 117 aa9.88□□□□□ -0.83
TRIM35-201ENST00000305364 IGF2-ASQ6U949 168 aa9.88□□□□□ -0.83
TRIM35-201ENST00000305364 ZNF625Q96I27 306 aaPredicted RBP9.88□□□□□ -0.83
TRIM35-201ENST00000305364 TIMM17AQ99595 171 aa9.88□□□□□ -0.83
TRIM35-201ENST00000305364 YAE1D1Q9NRH1 226 aa9.88□□□□□ -0.83
TRIM35-201ENST00000305364 KLK9Q9UKQ9 250 aa9.88□□□□□ -0.83
TRIM35-201ENST00000305364 WDFY3Q8IZQ1 3526 aa9.88□□□□□ -0.83
TRIM35-201ENST00000305364 BRD3OSQ6XYD6 125 aa9.88□□□□□ -0.83
TRIM35-201ENST00000305364 NPFFO15130 113 aa9.87□□□□□ -0.83
TRIM35-201ENST00000305364 TRBV10-2A0A0K0K1G8 114 aa9.87□□□□□ -0.83
TRIM35-201ENST00000305364 LY6G5BQ8NDX9 201 aa9.87□□□□□ -0.83
TRIM35-201ENST00000305364 C20orf173Q96LM9 149 aa9.87□□□□□ -0.83
TRIM35-201ENST00000305364 MOB4Q9Y3A3 225 aa9.87□□□□□ -0.83
TRIM35-201ENST00000305364 IGHV4-4A0A075B6R2 117 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms