RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 Q6ZN92 141 aa14.29□□□□□ -0.12
HOXC4-201ENST00000303406 TRBV6-5A0A0K0K1A5 114 aa14.28□□□□□ -0.12
HOXC4-201ENST00000303406 hDV102S1A0JD36 115 aa14.28□□□□□ -0.12
HOXC4-201ENST00000303406 ODF3L2Q3SX64 289 aa14.28□□□□□ -0.12
HOXC4-201ENST00000303406 RPL39LQ96EH5 51 aaKnown RBP14.28□□□□□ -0.12
HOXC4-201ENST00000303406 SMR3AQ99954 134 aa14.28□□□□□ -0.12
HOXC4-201ENST00000303406 SONP18583 2426 aaKnown RBP14.27□□□□□ -0.12
HOXC4-201ENST00000303406 CBY3A6NI87 242 aa14.27□□□□□ -0.12
HOXC4-201ENST00000303406 LINC01549A6NIU2 74 aa14.27□□□□□ -0.12
HOXC4-201ENST00000303406 ADARB2-AS1A8MUL3 147 aa14.27□□□□□ -0.12
HOXC4-201ENST00000303406 HIST2H2BDQ6DRA6 164 aa14.27□□□□□ -0.12
HOXC4-201ENST00000303406 MYO9AB2RTY4 2548 aa14.27□□□□□ -0.13
HOXC4-201ENST00000303406 G0S2P27469 103 aa14.26□□□□□ -0.13
HOXC4-201ENST00000303406 SUMO4Q6EEV6 95 aa14.26□□□□□ -0.13
HOXC4-201ENST00000303406 FAM110AQ9BQ89 295 aa14.26□□□□□ -0.13
HOXC4-201ENST00000303406 MCRIP2Q9BUT9 160 aaKnown RBP14.26□□□□□ -0.13
HOXC4-201ENST00000303406 TCAPO15273 167 aa14.25□□□□□ -0.13
HOXC4-201ENST00000303406 INSP01308 110 aa14.25□□□□□ -0.13
HOXC4-201ENST00000303406 ZNF124Q15973 351 aa14.25□□□□□ -0.13
HOXC4-201ENST00000303406 EDA2RQ9HAV5 297 aa14.25□□□□□ -0.13
HOXC4-201ENST00000303406 OR11H12B2RN74 326 aa14.25□□□□□ -0.13
HOXC4-201ENST00000303406 NUDT3O95989 172 aa14.25□□□□□ -0.13
HOXC4-201ENST00000303406 CRYGDP07320 174 aa14.25□□□□□ -0.13
HOXC4-201ENST00000303406 FOSL1P15407 271 aa14.25□□□□□ -0.13
HOXC4-201ENST00000303406 POLR2KP53803 58 aaKnown RBP14.25□□□□□ -0.13
HOXC4-201ENST00000303406 LURAP1LQ8IV03 231 aa14.25□□□□□ -0.13
HOXC4-201ENST00000303406 PMCHL2Q9BQD1 86 aa14.25□□□□□ -0.13
HOXC4-201ENST00000303406 ZMAT4Q9H898 229 aa14.25□□□□□ -0.13
HOXC4-201ENST00000303406 JPT2Q9H910 190 aa14.25□□□□□ -0.13
HOXC4-201ENST00000303406 AGRNO00468 2067 aa14.25□□□□□ -0.13
HOXC4-201ENST00000303406 ITPR2Q14571 2701 aa14.24□□□□□ -0.13
HOXC4-201ENST00000303406 ZNF415Q09FC8 603 aa14.24□□□□□ -0.13
HOXC4-201ENST00000303406 ODF1Q14990 250 aa14.24□□□□□ -0.13
HOXC4-201ENST00000303406 SLC25A34Q6PIV7 304 aa14.24□□□□□ -0.13
HOXC4-201ENST00000303406 NDUFA11Q86Y39 141 aa14.24□□□□□ -0.13
HOXC4-201ENST00000303406 TOMM6Q96B49 74 aa14.24□□□□□ -0.13
HOXC4-201ENST00000303406 C18orf15Q96N68 181 aa14.24□□□□□ -0.13
HOXC4-201ENST00000303406 ZNF876PQ49A33 203 aa14.23□□□□□ -0.13
HOXC4-201ENST00000303406 CSTL1Q9H114 145 aa14.23□□□□□ -0.13
HOXC4-201ENST00000303406 A0A087WWL8 130 aa14.22□□□□□ -0.13
HOXC4-201ENST00000303406 VCYO14598 125 aa14.22□□□□□ -0.13
HOXC4-201ENST00000303406 IGLV1-51P01701 117 aa14.22□□□□□ -0.13
HOXC4-201ENST00000303406 TRPT1Q86TN4 253 aaKnown RBP14.22□□□□□ -0.13
HOXC4-201ENST00000303406 STHQ8IWL8 128 aa14.22□□□□□ -0.13
HOXC4-201ENST00000303406 TRAV12-1A0A0B4J245 112 aa14.21□□□□□ -0.13
HOXC4-201ENST00000303406 M0R2P5 195 aa14.21□□□□□ -0.13
HOXC4-201ENST00000303406 PRSS1P07477 247 aa14.21□□□□□ -0.13
HOXC4-201ENST00000303406 COX8AP10176 69 aa14.21□□□□□ -0.13
HOXC4-201ENST00000303406 SPXQ9BT56 116 aa14.21□□□□□ -0.13
HOXC4-201ENST00000303406 F5H697 171 aa14.2□□□□□ -0.14
HOXC4-201ENST00000303406 M0QY20 66 aa14.2□□□□□ -0.14
HOXC4-201ENST00000303406 SAP30O75446 220 aa14.2□□□□□ -0.14
HOXC4-201ENST00000303406 TRBV27A0A0K0K1C4 114 aa14.2□□□□□ -0.14
HOXC4-201ENST00000303406 A8MWV9 139 aa14.2□□□□□ -0.14
HOXC4-201ENST00000303406 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.2□□□□□ -0.14
HOXC4-201ENST00000303406 ZNF56Q15929 161 aa14.19□□□□□ -0.14
HOXC4-201ENST00000303406 LINC01587Q99440 93 aa14.19□□□□□ -0.14
HOXC4-201ENST00000303406 DKK2Q9UBU2 259 aa14.19□□□□□ -0.14
HOXC4-201ENST00000303406 ACANP16112 2415 aa14.18□□□□□ -0.14
HOXC4-201ENST00000303406 A0A087WX48 190 aa14.18□□□□□ -0.14
HOXC4-201ENST00000303406 H7C1H1 209 aa14.18□□□□□ -0.14
HOXC4-201ENST00000303406 NUTF2P61970 127 aaKnown RBP14.18□□□□□ -0.14
HOXC4-201ENST00000303406 BEAN1Q3B7T3 259 aa14.18□□□□□ -0.14
HOXC4-201ENST00000303406 FAM74A4Q5TZK3 123 aa14.18□□□□□ -0.14
HOXC4-201ENST00000303406 C11orf72Q8NBR9 251 aa14.18□□□□□ -0.14
HOXC4-201ENST00000303406 KIR2DL4Q99706 377 aa14.18□□□□□ -0.14
HOXC4-201ENST00000303406 SDHAF1A6NFY7 115 aa14.17□□□□□ -0.14
HOXC4-201ENST00000303406 DLEU1O43261 78 aa14.17□□□□□ -0.14
HOXC4-201ENST00000303406 DPM2O94777 84 aa14.17□□□□□ -0.14
HOXC4-201ENST00000303406 IGKCP01834 107 aa14.17□□□□□ -0.14
HOXC4-201ENST00000303406 RIPPLY3P57055 190 aa14.17□□□□□ -0.14
HOXC4-201ENST00000303406 NSUN5P1Q3KNT7 163 aa14.17□□□□□ -0.14
HOXC4-201ENST00000303406 ANKRD39Q53RE8 183 aa14.17□□□□□ -0.14
HOXC4-201ENST00000303406 C2orf66Q6UXQ4 117 aa14.17□□□□□ -0.14
HOXC4-201ENST00000303406 SCGB3A1Q96QR1 104 aa14.17□□□□□ -0.14
HOXC4-201ENST00000303406 FASNP49327 2511 aaKnown RBP14.17□□□□□ -0.14
HOXC4-201ENST00000303406 A0A1B0GV90 55 aa14.16□□□□□ -0.14
HOXC4-201ENST00000303406 MORN3Q6PF18 240 aaPredicted RBP14.16□□□□□ -0.14
HOXC4-201ENST00000303406 GCN1Q92616 2671 aaKnown RBP14.15□□□□□ -0.14
HOXC4-201ENST00000303406 INAFM1C9JVW0 142 aa14.15□□□□□ -0.14
HOXC4-201ENST00000303406 RHOHQ15669 191 aa14.15□□□□□ -0.14
HOXC4-201ENST00000303406 UFSP1Q6NVU6 142 aa14.15□□□□□ -0.14
HOXC4-201ENST00000303406 ZFP2Q6ZN57 461 aa14.15□□□□□ -0.14
HOXC4-201ENST00000303406 ERASQ7Z444 233 aa14.15□□□□□ -0.14
HOXC4-201ENST00000303406 CYSLTR1Q9Y271 337 aa14.15□□□□□ -0.14
HOXC4-201ENST00000303406 HIVEP2P31629 2446 aa14.15□□□□□ -0.14
HOXC4-201ENST00000303406 RHODO00212 210 aa14.15□□□□□ -0.14
HOXC4-201ENST00000303406 KRTAP10-3P60369 221 aa14.15□□□□□ -0.14
HOXC4-201ENST00000303406 COL5A1-AS1Q5SY13 56 aa14.15□□□□□ -0.14
HOXC4-201ENST00000303406 SORL1Q92673 2214 aa14.14□□□□□ -0.15
HOXC4-201ENST00000303406 PLNP26678 52 aa14.14□□□□□ -0.15
HOXC4-201ENST00000303406 BOD1L2Q8IYS8 172 aa14.14□□□□□ -0.15
HOXC4-201ENST00000303406 NEXN-AS1Q8NBZ9 246 aa14.14□□□□□ -0.15
HOXC4-201ENST00000303406 HHLA3Q9XRX5 114 aa14.14□□□□□ -0.15
HOXC4-201ENST00000303406 FGF6P10767 208 aa14.13□□□□□ -0.15
HOXC4-201ENST00000303406 HTN1P15515 57 aa14.13□□□□□ -0.15
HOXC4-201ENST00000303406 C1orf158Q8N1D5 194 aa14.13□□□□□ -0.15
HOXC4-201ENST00000303406 IL17DQ8TAD2 202 aa14.13□□□□□ -0.15
HOXC4-201ENST00000303406 C19orf73Q9NVV2 129 aa14.13□□□□□ -0.15
HOXC4-201ENST00000303406 F8VRH5 84 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms