RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 HIST2H2BDQ6DRA6 164 aa13.21□□□□□ -0.29
CHRNA5-201ENST00000299565 AJUBAQ96IF1 538 aa13.21□□□□□ -0.29
CHRNA5-201ENST00000299565 IGHV7-4-1A0A0J9YVY3 117 aa13.21□□□□□ -0.3
CHRNA5-201ENST00000299565 AZU1P20160 251 aa13.21□□□□□ -0.3
CHRNA5-201ENST00000299565 FLNCQ14315 2725 aa13.2□□□□□ -0.3
CHRNA5-201ENST00000299565 RASL10AQ92737 203 aa13.2□□□□□ -0.3
CHRNA5-201ENST00000299565 RBAKDNA6NC62 111 aa13.2□□□□□ -0.3
CHRNA5-201ENST00000299565 C10orf99Q6UWK7 81 aa13.2□□□□□ -0.3
CHRNA5-201ENST00000299565 PTH2Q96A98 100 aa13.2□□□□□ -0.3
CHRNA5-201ENST00000299565 FAM223BA6NKX1 122 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 TMEM238C9JI98 176 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 C11orf71Q6IPW1 123 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 C9orf47Q6ZRZ4 202 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 FAM223AQ8IWN6 122 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 NRACQ8N912 160 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 SPXQ9BT56 116 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 FBXL19-AS1Q494R0 122 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 SYT8Q8NBV8 401 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 G3V4G9 280 aa13.19□□□□□ -0.3
CHRNA5-201ENST00000299565 DUX3Q96PT4 197 aa13.18□□□□□ -0.3
CHRNA5-201ENST00000299565 VCX2Q9H322 139 aa13.18□□□□□ -0.3
CHRNA5-201ENST00000299565 BAALCQ8WXS3 180 aa13.18□□□□□ -0.3
CHRNA5-201ENST00000299565 FOXI2Q6ZQN5 318 aa13.18□□□□□ -0.3
CHRNA5-201ENST00000299565 PLEKHB2Q96CS7 222 aa13.18□□□□□ -0.3
CHRNA5-201ENST00000299565 NDUFA4O00483 81 aa13.17□□□□□ -0.3
CHRNA5-201ENST00000299565 TMEM190Q8WZ59 177 aa13.17□□□□□ -0.3
CHRNA5-201ENST00000299565 EBI3Q14213 229 aa13.17□□□□□ -0.3
CHRNA5-201ENST00000299565 IGHV4-30-2A0A087WSY4 118 aa13.17□□□□□ -0.3
CHRNA5-201ENST00000299565 C11orf86A6NJI1 115 aa13.17□□□□□ -0.3
CHRNA5-201ENST00000299565 VCYO14598 125 aa13.17□□□□□ -0.3
CHRNA5-201ENST00000299565 ZFAND2AQ8N6M9 145 aa13.17□□□□□ -0.3
CHRNA5-201ENST00000299565 NDUFS8O00217 210 aa13.16□□□□□ -0.3
CHRNA5-201ENST00000299565 MDFICQ9P1T7 246 aa13.16□□□□□ -0.3
CHRNA5-201ENST00000299565 IGHV4-59P01825 116 aa13.16□□□□□ -0.3
CHRNA5-201ENST00000299565 RRN3P1Q2M238 152 aa13.16□□□□□ -0.3
CHRNA5-201ENST00000299565 HRNRQ86YZ3 2850 aaPredicted RBP13.16□□□□□ -0.3
CHRNA5-201ENST00000299565 GAGE12HA6NDE8 117 aa13.15□□□□□ -0.3
CHRNA5-201ENST00000299565 PPP1R17O96001 155 aa13.15□□□□□ -0.3
CHRNA5-201ENST00000299565 DEFB136Q30KP8 78 aa13.15□□□□□ -0.3
CHRNA5-201ENST00000299565 PHLDA1Q8WV24 401 aaPredicted RBP13.15□□□□□ -0.3
CHRNA5-201ENST00000299565 PRM2P04554 102 aa13.15□□□□□ -0.3
CHRNA5-201ENST00000299565 INSL3P51460 131 aa13.15□□□□□ -0.3
CHRNA5-201ENST00000299565 IGHV3-16A0A0C4DH30 117 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 IGKV3OR2-268A0A0C4DH90 116 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 SUMO4Q6EEV6 95 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 UFSP1Q6NVU6 142 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 ITLN2Q8WWU7 325 aaPredicted RBP13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 DOPEY1Q5JWR5 2465 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 CRYBG3Q68DQ2 2970 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 LGALS1P09382 135 aaKnown RBP13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 ZFP2Q6ZN57 461 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 DLX4Q92988 240 aaPredicted RBP13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 IGHV3-38A0A0C4DH36 116 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 LYRM7Q5U5X0 104 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 USMG5Q96IX5 58 aa13.14□□□□□ -0.31
CHRNA5-201ENST00000299565 HIGD1BQ9P298 99 aa13.13□□□□□ -0.31
CHRNA5-201ENST00000299565 ITPR1Q14643 2758 aa13.13□□□□□ -0.31
CHRNA5-201ENST00000299565 CD28P10747 220 aa13.13□□□□□ -0.31
CHRNA5-201ENST00000299565 PMVKQ15126 192 aa13.13□□□□□ -0.31
CHRNA5-201ENST00000299565 TNFRSF18Q9Y5U5 241 aa13.13□□□□□ -0.31
CHRNA5-201ENST00000299565 A0A1W2PRX2 142 aa13.13□□□□□ -0.31
CHRNA5-201ENST00000299565 DYNLRB2Q8TF09 96 aa13.12□□□□□ -0.31
CHRNA5-201ENST00000299565 ZNF625Q96I27 306 aaPredicted RBP13.12□□□□□ -0.31
CHRNA5-201ENST00000299565 MSMBP08118 114 aa13.12□□□□□ -0.31
CHRNA5-201ENST00000299565 C20orf78Q9BR46 151 aa13.12□□□□□ -0.31
CHRNA5-201ENST00000299565 F8W1H4 67 aa13.11□□□□□ -0.31
CHRNA5-201ENST00000299565 CNFNQ9BYD5 112 aa13.11□□□□□ -0.31
CHRNA5-201ENST00000299565 ZANQ9Y493 2812 aa13.11□□□□□ -0.31
CHRNA5-201ENST00000299565 DEFB131AP59861 70 aa13.11□□□□□ -0.31
CHRNA5-201ENST00000299565 CEMP1Q6PRD7 247 aaPredicted RBP13.11□□□□□ -0.31
CHRNA5-201ENST00000299565 TOMM6Q96B49 74 aa13.1□□□□□ -0.31
CHRNA5-201ENST00000299565 SPAG8Q99932 426 aaPredicted RBP13.1□□□□□ -0.31
CHRNA5-201ENST00000299565 C9JAW5 83 aa13.1□□□□□ -0.31
CHRNA5-201ENST00000299565 Q8N1Y9 231 aa13.1□□□□□ -0.31
CHRNA5-201ENST00000299565 GEMIN7Q9H840 131 aaKnown RBP13.1□□□□□ -0.31
CHRNA5-201ENST00000299565 A0A0J9YXV3 536 aa13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 J3QQQ9 107 aa13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 P0DMU3 169 aa13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 FAM231AP0DMU4 169 aa13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 FAM231CP0DMU5 169 aa13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 LINC01587Q99440 93 aa13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 TM2D2Q9BX73 214 aa13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 RNASE3P12724 160 aaKnown RBP13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 MRPL53Q96EL3 112 aaKnown RBP13.09□□□□□ -0.31
CHRNA5-201ENST00000299565 IGLV2-18A0A075B6J9 118 aa13.08□□□□□ -0.32
CHRNA5-201ENST00000299565 E9PLD3 99 aa13.08□□□□□ -0.32
CHRNA5-201ENST00000299565 DEFB112Q30KQ8 113 aa13.08□□□□□ -0.32
CHRNA5-201ENST00000299565 IGHV3-53P01767 116 aa13.08□□□□□ -0.32
CHRNA5-201ENST00000299565 PAPPA-AS1Q5QFB9 102 aa13.08□□□□□ -0.32
CHRNA5-201ENST00000299565 NEXN-AS1Q8NBZ9 246 aa13.08□□□□□ -0.32
CHRNA5-201ENST00000299565 A8MWV9 139 aa13.07□□□□□ -0.32
CHRNA5-201ENST00000299565 UBE2E2Q96LR5 201 aa13.07□□□□□ -0.32
CHRNA5-201ENST00000299565 LENEPQ9Y5L5 61 aa13.06□□□□□ -0.32
CHRNA5-201ENST00000299565 ERG28Q9UKR5 140 aa13.06□□□□□ -0.32
CHRNA5-201ENST00000299565 B4DSR2 109 aa13.06□□□□□ -0.32
CHRNA5-201ENST00000299565 SPINK8P0C7L1 97 aa13.06□□□□□ -0.32
CHRNA5-201ENST00000299565 SRSF2Q01130 221 aaKnown RBP13.06□□□□□ -0.32
CHRNA5-201ENST00000299565 IGHV1OR15-1A0A075B7D0 117 aa13.05□□□□□ -0.32
CHRNA5-201ENST00000299565 TAL2Q16559 108 aa13.05□□□□□ -0.32
CHRNA5-201ENST00000299565 A0A1B0GV72 72 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms