RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 TRAV12-3A0A0B4J271 114 aa14.69□□□□□ -0.06
NFIL3-201ENST00000297689 FXYD2P54710 66 aa14.69□□□□□ -0.06
NFIL3-201ENST00000297689 WFDC12Q8WWY7 111 aa14.69□□□□□ -0.06
NFIL3-201ENST00000297689 CSTL1Q9H114 145 aa14.69□□□□□ -0.06
NFIL3-201ENST00000297689 CCDC168Q8NDH2 2452 aa14.69□□□□□ -0.06
NFIL3-201ENST00000297689 BAALCQ8WXS3 180 aa14.69□□□□□ -0.06
NFIL3-201ENST00000297689 IGHV3-16A0A0C4DH30 117 aa14.68□□□□□ -0.06
NFIL3-201ENST00000297689 CD7P09564 240 aa14.68□□□□□ -0.06
NFIL3-201ENST00000297689 CHTOPQ9Y3Y2 248 aaKnown RBP14.68□□□□□ -0.06
NFIL3-201ENST00000297689 CREBBPQ92793 2442 aa14.68□□□□□ -0.06
NFIL3-201ENST00000297689 H3BUT2 72 aa14.67□□□□□ -0.06
NFIL3-201ENST00000297689 SYNJ2BPP57105 145 aa14.67□□□□□ -0.06
NFIL3-201ENST00000297689 SNRPD3P62318 126 aaKnown RBP14.67□□□□□ -0.06
NFIL3-201ENST00000297689 SUMO4Q6EEV6 95 aa14.67□□□□□ -0.06
NFIL3-201ENST00000297689 PHLDA1Q8WV24 401 aaPredicted RBP14.67□□□□□ -0.06
NFIL3-201ENST00000297689 UBE2E2Q96LR5 201 aa14.67□□□□□ -0.06
NFIL3-201ENST00000297689 MXRA5Q9NR99 2828 aa14.66□□□□□ -0.06
NFIL3-201ENST00000297689 HOXA3O43365 443 aaPredicted RBP14.66□□□□□ -0.06
NFIL3-201ENST00000297689 CBY1Q9Y3M2 126 aa14.66□□□□□ -0.06
NFIL3-201ENST00000297689 GAGE12BA1L429 117 aa14.65□□□□□ -0.06
NFIL3-201ENST00000297689 GAGE10A6NGK3 116 aa14.65□□□□□ -0.06
NFIL3-201ENST00000297689 CST9LQ9H4G1 147 aa14.65□□□□□ -0.06
NFIL3-201ENST00000297689 ITPR3Q14573 2671 aa14.65□□□□□ -0.06
NFIL3-201ENST00000297689 TRBV6-5A0A0K0K1A5 114 aa14.65□□□□□ -0.06
NFIL3-201ENST00000297689 PRSS29PA6NIE9 313 aa14.65□□□□□ -0.06
NFIL3-201ENST00000297689 GCSHP23434 173 aa14.65□□□□□ -0.06
NFIL3-201ENST00000297689 TAL2Q16559 108 aa14.65□□□□□ -0.06
NFIL3-201ENST00000297689 CEND1Q8N111 149 aa14.65□□□□□ -0.06
NFIL3-201ENST00000297689 TSHBP01222 138 aa14.64□□□□□ -0.07
NFIL3-201ENST00000297689 CRYGDP07320 174 aa14.64□□□□□ -0.07
NFIL3-201ENST00000297689 HOXD3P31249 432 aaPredicted RBP14.64□□□□□ -0.07
NFIL3-201ENST00000297689 AMTNQ6UX39 209 aa14.64□□□□□ -0.07
NFIL3-201ENST00000297689 MDFICQ9P1T7 246 aa14.64□□□□□ -0.07
NFIL3-201ENST00000297689 TEX15Q9BXT5 2789 aa14.64□□□□□ -0.07
NFIL3-201ENST00000297689 ZNF469Q96JG9 3925 aaPredicted RBP14.64□□□□□ -0.07
NFIL3-201ENST00000297689 LINC01549A6NIU2 74 aa14.64□□□□□ -0.07
NFIL3-201ENST00000297689 IGIPA6NJ69 53 aa14.64□□□□□ -0.07
NFIL3-201ENST00000297689 LINC01619G3V211 115 aa14.64□□□□□ -0.07
NFIL3-201ENST00000297689 K7EP34 96 aa14.64□□□□□ -0.07
NFIL3-201ENST00000297689 SMIM13P0DJ93 91 aa14.64□□□□□ -0.07
NFIL3-201ENST00000297689 CDKN1BP46527 198 aa14.64□□□□□ -0.07
NFIL3-201ENST00000297689 NEGR1Q7Z3B1 354 aa14.64□□□□□ -0.07
NFIL3-201ENST00000297689 AGRNO00468 2067 aa14.63□□□□□ -0.07
NFIL3-201ENST00000297689 TRAV12-2A0A075B6T6 113 aa14.63□□□□□ -0.07
NFIL3-201ENST00000297689 A0A1W2PPM0 123 aa14.63□□□□□ -0.07
NFIL3-201ENST00000297689 DUSP14O95147 198 aaKnown RBP14.63□□□□□ -0.07
NFIL3-201ENST00000297689 ZFP2Q6ZN57 461 aa14.63□□□□□ -0.07
NFIL3-201ENST00000297689 Q8N1Y9 231 aa14.63□□□□□ -0.07
NFIL3-201ENST00000297689 RAB37Q96AX2 223 aa14.63□□□□□ -0.07
NFIL3-201ENST00000297689 NAA38Q9BRA0 125 aaKnown RBP14.63□□□□□ -0.07
NFIL3-201ENST00000297689 A0A087WWL8 130 aa14.62□□□□□ -0.07
NFIL3-201ENST00000297689 TRBV27A0A0K0K1C4 114 aa14.62□□□□□ -0.07
NFIL3-201ENST00000297689 GTF2H5Q6ZYL4 71 aa14.62□□□□□ -0.07
NFIL3-201ENST00000297689 WFDC11Q8NEX6 87 aa14.62□□□□□ -0.07
NFIL3-201ENST00000297689 IGHV1OR15-1A0A075B7D0 117 aa14.62□□□□□ -0.07
NFIL3-201ENST00000297689 VCYO14598 125 aa14.62□□□□□ -0.07
NFIL3-201ENST00000297689 CYSLTR1Q9Y271 337 aa14.62□□□□□ -0.07
NFIL3-201ENST00000297689 E9PLD3 99 aa14.61□□□□□ -0.07
NFIL3-201ENST00000297689 RIPPLY3P57055 190 aa14.61□□□□□ -0.07
NFIL3-201ENST00000297689 MORN3Q6PF18 240 aaPredicted RBP14.61□□□□□ -0.07
NFIL3-201ENST00000297689 Q8N2B8 174 aa14.61□□□□□ -0.07
NFIL3-201ENST00000297689 OCIAD2Q56VL3 154 aa14.61□□□□□ -0.07
NFIL3-201ENST00000297689 FOXI2Q6ZQN5 318 aa14.61□□□□□ -0.07
NFIL3-201ENST00000297689 TRBV7-3A0A075B6L6 115 aa14.6□□□□□ -0.07
NFIL3-201ENST00000297689 IGKV3-20P01619 116 aa14.6□□□□□ -0.07
NFIL3-201ENST00000297689 SPINK13Q1W4C9 94 aa14.6□□□□□ -0.07
NFIL3-201ENST00000297689 DUX5Q96PT3 197 aa14.6□□□□□ -0.07
NFIL3-201ENST00000297689 SDHAF1A6NFY7 115 aa14.59□□□□□ -0.07
NFIL3-201ENST00000297689 A8MTW9 85 aa14.59□□□□□ -0.07
NFIL3-201ENST00000297689 OR11H12B2RN74 326 aa14.59□□□□□ -0.07
NFIL3-201ENST00000297689 M0QY20 66 aa14.59□□□□□ -0.07
NFIL3-201ENST00000297689 OR11H1Q8NG94 326 aa14.59□□□□□ -0.07
NFIL3-201ENST00000297689 OR11H2Q8NH07 326 aa14.59□□□□□ -0.07
NFIL3-201ENST00000297689 MYMXA0A1B0GTQ4 84 aa14.59□□□□□ -0.07
NFIL3-201ENST00000297689 TP53TG1Q9Y2A0 90 aa14.59□□□□□ -0.07
NFIL3-201ENST00000297689 SORL1Q92673 2214 aa14.58□□□□□ -0.07
NFIL3-201ENST00000297689 IGLV4-69A0A075B6H9 119 aa14.58□□□□□ -0.08
NFIL3-201ENST00000297689 TIMM17AQ99595 171 aa14.58□□□□□ -0.08
NFIL3-201ENST00000297689 ZNF256Q9Y2P7 627 aaPredicted RBP14.58□□□□□ -0.08
NFIL3-201ENST00000297689 SAMD5Q5TGI4 173 aa14.57□□□□□ -0.08
NFIL3-201ENST00000297689 SYT8Q8NBV8 401 aa14.57□□□□□ -0.08
NFIL3-201ENST00000297689 KIR2DL4Q99706 377 aa14.57□□□□□ -0.08
NFIL3-201ENST00000297689 AKAP9Q99996 3911 aa14.57□□□□□ -0.08
NFIL3-201ENST00000297689 F5H697 171 aa14.57□□□□□ -0.08
NFIL3-201ENST00000297689 TCTEX1D4Q5JR98 221 aa14.57□□□□□ -0.08
NFIL3-201ENST00000297689 TMEM141Q96I45 108 aa14.57□□□□□ -0.08
NFIL3-201ENST00000297689 FLNAP21333 2647 aaKnown RBP14.57□□□□□ -0.08
NFIL3-201ENST00000297689 K7ERJ3 54 aa14.56□□□□□ -0.08
NFIL3-201ENST00000297689 RPL39P62891 51 aaKnown RBP14.56□□□□□ -0.08
NFIL3-201ENST00000297689 PRADC1Q9BSG0 188 aa14.56□□□□□ -0.08
NFIL3-201ENST00000297689 C18orf65Q6ZTR6 163 aa14.56□□□□□ -0.08
NFIL3-201ENST00000297689 OR5A1Q8NGJ0 315 aa14.56□□□□□ -0.08
NFIL3-201ENST00000297689 NHP2Q9NX24 153 aaKnown RBP14.56□□□□□ -0.08
NFIL3-201ENST00000297689 SPCS1Q9Y6A9 102 aa14.56□□□□□ -0.08
NFIL3-201ENST00000297689 A0A1B0GWB2 263 aa14.55□□□□□ -0.08
NFIL3-201ENST00000297689 RBMY1A1P0DJD3 496 aaKnown RBP14.55□□□□□ -0.08
NFIL3-201ENST00000297689 RBMY1CP0DJD4 496 aa14.55□□□□□ -0.08
NFIL3-201ENST00000297689 PMVKQ15126 192 aa14.55□□□□□ -0.08
NFIL3-201ENST00000297689 RBMY1FQ15415 496 aaKnown RBP14.55□□□□□ -0.08
NFIL3-201ENST00000297689 TLN2Q9Y4G6 2542 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms