RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 NCKAP5O14513 1909 aa9.02□□□□□ -0.97
SNIP1-201ENST00000296215 TMEM178BH3BS89 294 aa9.01□□□□□ -0.97
SNIP1-201ENST00000296215 P0C879 139 aa9.01□□□□□ -0.97
SNIP1-201ENST00000296215 IGHV3-30-3P0DP02 117 aa9.01□□□□□ -0.97
SNIP1-201ENST00000296215 MRPL14Q6P1L8 145 aaKnown RBP9.01□□□□□ -0.97
SNIP1-201ENST00000296215 EXPH5Q8NEV8 1989 aa9.01□□□□□ -0.97
SNIP1-201ENST00000296215 NCOA6Q14686 2063 aaPredicted RBP9.01□□□□□ -0.97
SNIP1-201ENST00000296215 PLXNB1O43157 2135 aa9.01□□□□□ -0.97
SNIP1-201ENST00000296215 ESRGQ1W209 222 aa9.01□□□□□ -0.97
SNIP1-201ENST00000296215 COL4A1P02462 1669 aa9.01□□□□□ -0.97
SNIP1-201ENST00000296215 SCN10AQ9Y5Y9 1956 aa9.01□□□□□ -0.97
SNIP1-201ENST00000296215 LMO7DNF2Z398 122 aa9.01□□□□□ -0.97
SNIP1-201ENST00000296215 Q6ZPA2 131 aa9.01□□□□□ -0.97
SNIP1-201ENST00000296215 APRG1Q8IVJ8 170 aa9.01□□□□□ -0.97
SNIP1-201ENST00000296215 EP300Q09472 2414 aaPredicted RBP9□□□□□ -0.97
SNIP1-201ENST00000296215 TRBV27A0A0K0K1C4 114 aa9□□□□□ -0.97
SNIP1-201ENST00000296215 NRXN2Q9P2S2 1712 aa9□□□□□ -0.97
SNIP1-201ENST00000296215 H3BRN7 92 aa9□□□□□ -0.97
SNIP1-201ENST00000296215 COL11A2P13942 1736 aaPredicted RBP9□□□□□ -0.97
SNIP1-201ENST00000296215 TRBV6-1A0A0K0K1D8 114 aa9□□□□□ -0.97
SNIP1-201ENST00000296215 PAX8Q06710 450 aa9□□□□□ -0.97
SNIP1-201ENST00000296215 C11orf53Q8IXP5 236 aa9□□□□□ -0.97
SNIP1-201ENST00000296215 FLVCR1-AS1Q8TAF5 88 aa9□□□□□ -0.97
SNIP1-201ENST00000296215 RMI2Q96E14 147 aa9□□□□□ -0.97
SNIP1-201ENST00000296215 KMT2EQ8IZD2 1858 aa9□□□□□ -0.97
SNIP1-201ENST00000296215 SUMO4Q6EEV6 95 aa8.99□□□□□ -0.97
SNIP1-201ENST00000296215 SPINK14Q6IE38 97 aa8.99□□□□□ -0.97
SNIP1-201ENST00000296215 FDCSPQ8NFU4 85 aa8.99□□□□□ -0.97
SNIP1-201ENST00000296215 MRPL53Q96EL3 112 aaKnown RBP8.99□□□□□ -0.97
SNIP1-201ENST00000296215 NCR3O14931 201 aa8.99□□□□□ -0.97
SNIP1-201ENST00000296215 CLPSP04118 112 aa8.99□□□□□ -0.97
SNIP1-201ENST00000296215 CCKP06307 115 aa8.99□□□□□ -0.97
SNIP1-201ENST00000296215 GVINP1Q7Z2Y8 2422 aa8.99□□□□□ -0.97
SNIP1-201ENST00000296215 GREB1Q4ZG55 1949 aa8.99□□□□□ -0.97
SNIP1-201ENST00000296215 SBF1O95248 1867 aa8.99□□□□□ -0.97
SNIP1-201ENST00000296215 PROP1O75360 226 aa8.99□□□□□ -0.97
SNIP1-201ENST00000296215 CCL3L1P16619 93 aa8.99□□□□□ -0.97
SNIP1-201ENST00000296215 Q8N7P7 452 aa8.98□□□□□ -0.97
SNIP1-201ENST00000296215 C9orf139Q6ZV77 190 aa8.98□□□□□ -0.97
SNIP1-201ENST00000296215 C15orf65H3BRN8 121 aa8.98□□□□□ -0.97
SNIP1-201ENST00000296215 TMEM256-PLSCR3K7ERE1 68 aa8.98□□□□□ -0.97
SNIP1-201ENST00000296215 OBSL1O75147 1896 aa8.97□□□□□ -0.97
SNIP1-201ENST00000296215 IGHV1-58A0A0C4DH39 117 aa8.97□□□□□ -0.97
SNIP1-201ENST00000296215 MRPL36Q9P0J6 103 aaKnown RBP8.97□□□□□ -0.97
SNIP1-201ENST00000296215 SND1-IT1Q9HBX3 110 aa8.97□□□□□ -0.97
SNIP1-201ENST00000296215 IGLV3-32A0A0A0MS00 114 aa8.97□□□□□ -0.97
SNIP1-201ENST00000296215 IGHV3-73A0A0B4J1V6 119 aa8.97□□□□□ -0.97
SNIP1-201ENST00000296215 BUB1B-PAK6H3BSN5 160 aa8.97□□□□□ -0.97
SNIP1-201ENST00000296215 ZNF134P52741 427 aa8.96□□□□□ -0.97
SNIP1-201ENST00000296215 FER1L5A0AVI2 2057 aa8.96□□□□□ -0.97
SNIP1-201ENST00000296215 PKDREJQ9NTG1 2253 aa8.96□□□□□ -0.97
SNIP1-201ENST00000296215 COL8A2P25067 703 aa8.96□□□□□ -0.97
SNIP1-201ENST00000296215 RPP25Q9BUL9 199 aaKnown RBP8.96□□□□□ -0.97
SNIP1-201ENST00000296215 SORL1Q92673 2214 aa8.96□□□□□ -0.98
SNIP1-201ENST00000296215 A0A087WZ39 114 aa8.96□□□□□ -0.98
SNIP1-201ENST00000296215 FHL2Q14192 279 aa8.96□□□□□ -0.98
SNIP1-201ENST00000296215 Q6ZSR3 168 aa8.96□□□□□ -0.98
SNIP1-201ENST00000296215 APOC4P55056 127 aa8.95□□□□□ -0.98
SNIP1-201ENST00000296215 CFHR1Q03591 330 aa8.95□□□□□ -0.98
SNIP1-201ENST00000296215 POM121L12Q8N7R1 296 aa8.95□□□□□ -0.98
SNIP1-201ENST00000296215 RNF185Q96GF1 192 aa8.95□□□□□ -0.98
SNIP1-201ENST00000296215 ANAPC1Q9H1A4 1944 aa8.95□□□□□ -0.98
SNIP1-201ENST00000296215 IGHV1-8P0DP01 117 aa8.95□□□□□ -0.98
SNIP1-201ENST00000296215 Q96MF0 132 aa8.95□□□□□ -0.98
SNIP1-201ENST00000296215 CNOT1A5YKK6 2376 aaKnown RBP8.94□□□□□ -0.98
SNIP1-201ENST00000296215 GNLYP22749 145 aa8.94□□□□□ -0.98
SNIP1-201ENST00000296215 ZNF71Q9NQZ8 489 aaPredicted RBP8.94□□□□□ -0.98
SNIP1-201ENST00000296215 C7orf69Q9H7B7 122 aa8.94□□□□□ -0.98
SNIP1-201ENST00000296215 ZNF106Q9H2Y7 1883 aaKnown RBP8.94□□□□□ -0.98
SNIP1-201ENST00000296215 H3BS24 57 aa8.93□□□□□ -0.98
SNIP1-201ENST00000296215 CRIP3Q6Q6R5 217 aa8.93□□□□□ -0.98
SNIP1-201ENST00000296215 PCNX3Q9H6A9 2034 aa8.93□□□□□ -0.98
SNIP1-201ENST00000296215 SRRM5B3KS81 715 aa8.93□□□□□ -0.98
SNIP1-201ENST00000296215 MP68P56378 58 aa8.93□□□□□ -0.98
SNIP1-201ENST00000296215 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.93□□□□□ -0.98
SNIP1-201ENST00000296215 EML6Q6ZMW3 1958 aa8.93□□□□□ -0.98
SNIP1-201ENST00000296215 FAM19A3Q7Z5A8 133 aa8.93□□□□□ -0.98
SNIP1-201ENST00000296215 LINC00474Q9P2X8 69 aa8.93□□□□□ -0.98
SNIP1-201ENST00000296215 INSP01308 110 aa8.92□□□□□ -0.98
SNIP1-201ENST00000296215 HILS1P60008 231 aa8.92□□□□□ -0.98
SNIP1-201ENST00000296215 ZNF491Q8N8L2 437 aa8.92□□□□□ -0.98
SNIP1-201ENST00000296215 OPRPNQ99935 248 aaPredicted RBP8.92□□□□□ -0.98
SNIP1-201ENST00000296215 WDR86Q86TI4 376 aa8.92□□□□□ -0.98
SNIP1-201ENST00000296215 LINC00482Q8N8I6 264 aa8.92□□□□□ -0.98
SNIP1-201ENST00000296215 CRIP1P50238 77 aa8.92□□□□□ -0.98
SNIP1-201ENST00000296215 COX7B2Q8TF08 81 aa8.92□□□□□ -0.98
SNIP1-201ENST00000296215 ZNRD1Q9P1U0 126 aa8.92□□□□□ -0.98
SNIP1-201ENST00000296215 PAPPA2Q9BXP8 1791 aa8.91□□□□□ -0.98
SNIP1-201ENST00000296215 NREPQ16612 68 aa8.91□□□□□ -0.98
SNIP1-201ENST00000296215 FAM222AQ5U5X8 452 aa8.91□□□□□ -0.98
SNIP1-201ENST00000296215 ANK1P16157 1881 aa8.91□□□□□ -0.98
SNIP1-201ENST00000296215 TEX22C9J3V5 150 aa8.91□□□□□ -0.98
SNIP1-201ENST00000296215 CD59P13987 128 aa8.91□□□□□ -0.98
SNIP1-201ENST00000296215 FAM19A1Q7Z5A9 133 aa8.91□□□□□ -0.98
SNIP1-201ENST00000296215 WDR90Q96KV7 1748 aa8.91□□□□□ -0.98
SNIP1-201ENST00000296215 GAS8-AS1O95177 125 aa8.91□□□□□ -0.98
SNIP1-201ENST00000296215 CDSNQ15517 529 aa8.91□□□□□ -0.98
SNIP1-201ENST00000296215 PRR4Q16378 134 aa8.91□□□□□ -0.98
SNIP1-201ENST00000296215 Q5XG85 94 aa8.91□□□□□ -0.98
SNIP1-201ENST00000296215 SCXQ7RTU7 201 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms