RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 TCAPO15273 167 aa9.7□□□□□ -0.86
PPP1CB-201ENST00000296122 TNFRSF18Q9Y5U5 241 aa9.7□□□□□ -0.86
PPP1CB-201ENST00000296122 TRGV1A0A0A0MS02 117 aa9.7□□□□□ -0.86
PPP1CB-201ENST00000296122 MORN3Q6PF18 240 aaPredicted RBP9.7□□□□□ -0.86
PPP1CB-201ENST00000296122 JPT2Q9H910 190 aa9.7□□□□□ -0.86
PPP1CB-201ENST00000296122 IGHV3-73A0A0B4J1V6 119 aa9.7□□□□□ -0.86
PPP1CB-201ENST00000296122 RHODO00212 210 aa9.7□□□□□ -0.86
PPP1CB-201ENST00000296122 DDTP30046 118 aa9.7□□□□□ -0.86
PPP1CB-201ENST00000296122 VCYO14598 125 aa9.69□□□□□ -0.86
PPP1CB-201ENST00000296122 LINC00482Q8N8I6 264 aa9.69□□□□□ -0.86
PPP1CB-201ENST00000296122 C9orf85Q96MD7 179 aa9.69□□□□□ -0.86
PPP1CB-201ENST00000296122 C12orf54Q6X4T0 127 aa9.69□□□□□ -0.86
PPP1CB-201ENST00000296122 TRPT1Q86TN4 253 aaKnown RBP9.69□□□□□ -0.86
PPP1CB-201ENST00000296122 ZNF664Q8N3J9 261 aa9.69□□□□□ -0.86
PPP1CB-201ENST00000296122 RPL39LQ96EH5 51 aaKnown RBP9.69□□□□□ -0.86
PPP1CB-201ENST00000296122 SCGB3A1Q96QR1 104 aa9.69□□□□□ -0.86
PPP1CB-201ENST00000296122 URB1-AS1Q96HZ7 61 aa9.68□□□□□ -0.86
PPP1CB-201ENST00000296122 TRGV2A0A075B6R0 118 aa9.68□□□□□ -0.86
PPP1CB-201ENST00000296122 RBMY1BA6NDE4 496 aaKnown RBP9.68□□□□□ -0.86
PPP1CB-201ENST00000296122 RBMY1EA6NEQ0 496 aaKnown RBP9.68□□□□□ -0.86
PPP1CB-201ENST00000296122 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.68□□□□□ -0.86
PPP1CB-201ENST00000296122 RBMY1DP0C7P1 496 aaKnown RBP9.68□□□□□ -0.86
PPP1CB-201ENST00000296122 SUMO4Q6EEV6 95 aa9.68□□□□□ -0.86
PPP1CB-201ENST00000296122 OR4C5Q8NGB2 326 aa9.68□□□□□ -0.86
PPP1CB-201ENST00000296122 PMCHL2Q9BQD1 86 aa9.68□□□□□ -0.86
PPP1CB-201ENST00000296122 ZNF747Q9BV97 191 aa9.68□□□□□ -0.86
PPP1CB-201ENST00000296122 MRPL16Q9NX20 251 aaKnown RBP9.68□□□□□ -0.86
PPP1CB-201ENST00000296122 TRAV9-2A0A087WT02 112 aa9.67□□□□□ -0.86
PPP1CB-201ENST00000296122 CRXO43186 299 aaPredicted RBP9.67□□□□□ -0.86
PPP1CB-201ENST00000296122 CLUHP3Q96NS8 147 aa9.67□□□□□ -0.86
PPP1CB-201ENST00000296122 FAM110AQ9BQ89 295 aa9.67□□□□□ -0.86
PPP1CB-201ENST00000296122 SDHAF1A6NFY7 115 aa9.67□□□□□ -0.86
PPP1CB-201ENST00000296122 ADARB2-AS1A8MUL3 147 aa9.67□□□□□ -0.86
PPP1CB-201ENST00000296122 TEX43Q6ZNM6 134 aa9.67□□□□□ -0.86
PPP1CB-201ENST00000296122 LINC00173Q6ZV60 143 aa9.67□□□□□ -0.86
PPP1CB-201ENST00000296122 CYSLTR1Q9Y271 337 aa9.67□□□□□ -0.86
PPP1CB-201ENST00000296122 EMP1P54849 157 aa9.66□□□□□ -0.86
PPP1CB-201ENST00000296122 DEFB125Q8N687 156 aa9.66□□□□□ -0.86
PPP1CB-201ENST00000296122 WFDC10AQ9H1F0 79 aa9.66□□□□□ -0.86
PPP1CB-201ENST00000296122 LINC01549A6NIU2 74 aa9.66□□□□□ -0.86
PPP1CB-201ENST00000296122 K7EMI3 77 aa9.66□□□□□ -0.86
PPP1CB-201ENST00000296122 GAS8-AS1O95177 125 aa9.66□□□□□ -0.86
PPP1CB-201ENST00000296122 NXPH4O95158 308 aa9.66□□□□□ -0.86
PPP1CB-201ENST00000296122 AZU1P20160 251 aa9.66□□□□□ -0.86
PPP1CB-201ENST00000296122 HNRNPA3P51991 378 aaKnown RBP9.66□□□□□ -0.86
PPP1CB-201ENST00000296122 RASL10AQ92737 203 aa9.66□□□□□ -0.86
PPP1CB-201ENST00000296122 LINC00587B1AMM8 73 aa9.65□□□□□ -0.86
PPP1CB-201ENST00000296122 NRACQ8N912 160 aa9.65□□□□□ -0.86
PPP1CB-201ENST00000296122 UQCR10Q9UDW1 63 aa9.65□□□□□ -0.86
PPP1CB-201ENST00000296122 SETXQ7Z333 2677 aaKnown RBP9.65□□□□□ -0.87
PPP1CB-201ENST00000296122 A8MTW9 85 aa9.64□□□□□ -0.87
PPP1CB-201ENST00000296122 ZNF575Q86XF7 245 aa9.64□□□□□ -0.87
PPP1CB-201ENST00000296122 KRTAP10-3P60369 221 aa9.64□□□□□ -0.87
PPP1CB-201ENST00000296122 BEAN1Q3B7T3 259 aa9.64□□□□□ -0.87
PPP1CB-201ENST00000296122 NEGR1Q7Z3B1 354 aa9.64□□□□□ -0.87
PPP1CB-201ENST00000296122 TMEM263Q8WUH6 116 aaKnown RBP9.64□□□□□ -0.87
PPP1CB-201ENST00000296122 BATFQ16520 125 aa9.64□□□□□ -0.87
PPP1CB-201ENST00000296122 C2orf66Q6UXQ4 117 aa9.64□□□□□ -0.87
PPP1CB-201ENST00000296122 C16orf74Q96GX8 76 aa9.64□□□□□ -0.87
PPP1CB-201ENST00000296122 VPS13CQ709C8 3753 aa9.63□□□□□ -0.87
PPP1CB-201ENST00000296122 RBMY1A1P0DJD3 496 aaKnown RBP9.63□□□□□ -0.87
PPP1CB-201ENST00000296122 RBMY1CP0DJD4 496 aa9.63□□□□□ -0.87
PPP1CB-201ENST00000296122 RBMY1FQ15415 496 aaKnown RBP9.63□□□□□ -0.87
PPP1CB-201ENST00000296122 DEFB104AQ8WTQ1 72 aa9.63□□□□□ -0.87
PPP1CB-201ENST00000296122 IGHV3-53P01767 116 aa9.63□□□□□ -0.87
PPP1CB-201ENST00000296122 PRM2P04554 102 aa9.63□□□□□ -0.87
PPP1CB-201ENST00000296122 APOC4P55056 127 aa9.63□□□□□ -0.87
PPP1CB-201ENST00000296122 NOP10Q9NPE3 64 aaKnown RBP9.62□□□□□ -0.87
PPP1CB-201ENST00000296122 MIEN1Q9BRT3 115 aa9.62□□□□□ -0.87
PPP1CB-201ENST00000296122 ZMAT5Q9UDW3 170 aaKnown RBP9.62□□□□□ -0.87
PPP1CB-201ENST00000296122 NF1P21359 2839 aa9.62□□□□□ -0.87
PPP1CB-201ENST00000296122 HIVEP1P15822 2718 aa9.62□□□□□ -0.87
PPP1CB-201ENST00000296122 C14orf144Q96I85 54 aa9.62□□□□□ -0.87
PPP1CB-201ENST00000296122 CRYGDP07320 174 aa9.61□□□□□ -0.87
PPP1CB-201ENST00000296122 LGALS9BQ3B8N2 356 aa9.61□□□□□ -0.87
PPP1CB-201ENST00000296122 LGALS9CQ6DKI2 356 aa9.61□□□□□ -0.87
PPP1CB-201ENST00000296122 DGAT2L7PQ6IED9 249 aa9.61□□□□□ -0.87
PPP1CB-201ENST00000296122 CITED1Q99966 193 aa9.61□□□□□ -0.87
PPP1CB-201ENST00000296122 TRGV4A0A0C4DH28 118 aa9.61□□□□□ -0.87
PPP1CB-201ENST00000296122 NDUFAF3Q9BU61 184 aa9.61□□□□□ -0.87
PPP1CB-201ENST00000296122 I3L3M4 83 aa9.61□□□□□ -0.87
PPP1CB-201ENST00000296122 IGLL1P15814 213 aa9.61□□□□□ -0.87
PPP1CB-201ENST00000296122 PIK3CD-AS1Q5SR53 167 aa9.61□□□□□ -0.87
PPP1CB-201ENST00000296122 C1orf158Q8N1D5 194 aa9.61□□□□□ -0.87
PPP1CB-201ENST00000296122 LINC00467Q9BRT7 94 aa9.61□□□□□ -0.87
PPP1CB-201ENST00000296122 GAGE12BA1L429 117 aa9.6□□□□□ -0.87
PPP1CB-201ENST00000296122 GAGE7O76087 117 aa9.6□□□□□ -0.87
PPP1CB-201ENST00000296122 GAGE12FP0CL80 117 aa9.6□□□□□ -0.87
PPP1CB-201ENST00000296122 GAGE12GP0CL81 117 aa9.6□□□□□ -0.87
PPP1CB-201ENST00000296122 GAGE12IP0CL82 117 aa9.6□□□□□ -0.87
PPP1CB-201ENST00000296122 RPL36AP83881 106 aaKnown RBP9.6□□□□□ -0.87
PPP1CB-201ENST00000296122 PAPPA-AS1Q5QFB9 102 aa9.6□□□□□ -0.87
PPP1CB-201ENST00000296122 RPL36ALQ969Q0 106 aaKnown RBP9.6□□□□□ -0.87
PPP1CB-201ENST00000296122 ATRQ13535 2644 aa9.6□□□□□ -0.87
PPP1CB-201ENST00000296122 NSD1Q96L73 2696 aaPredicted RBP9.6□□□□□ -0.87
PPP1CB-201ENST00000296122 hDV102S1A0JD36 115 aa9.6□□□□□ -0.87
PPP1CB-201ENST00000296122 DPM2O94777 84 aa9.6□□□□□ -0.87
PPP1CB-201ENST00000296122 COTL1Q14019 142 aa9.6□□□□□ -0.87
PPP1CB-201ENST00000296122 SLC25A34Q6PIV7 304 aa9.6□□□□□ -0.87
PPP1CB-201ENST00000296122 TP53TG1Q9Y2A0 90 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms