RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TRBV12-3P01733 135 aa13.61□□□□□ -0.23
CDC42EP3-201ENST00000295324 F8VRH5 84 aa13.61□□□□□ -0.23
CDC42EP3-201ENST00000295324 LY6G6DO95868 133 aa13.61□□□□□ -0.23
CDC42EP3-201ENST00000295324 TMEM126AQ9H061 195 aa13.61□□□□□ -0.23
CDC42EP3-201ENST00000295324 K7EN84 100 aa13.6□□□□□ -0.23
CDC42EP3-201ENST00000295324 MUC22E2RYF6 1773 aaPredicted RBP13.6□□□□□ -0.23
CDC42EP3-201ENST00000295324 FAM167A-AS1Q96KT0 104 aa13.59□□□□□ -0.23
CDC42EP3-201ENST00000295324 DAZ2Q13117 558 aaKnown RBP13.59□□□□□ -0.23
CDC42EP3-201ENST00000295324 DAZ4Q86SG3 579 aaKnown RBP13.59□□□□□ -0.23
CDC42EP3-201ENST00000295324 DAZ3Q9NR90 486 aaKnown RBP13.59□□□□□ -0.23
CDC42EP3-201ENST00000295324 ASPHD1Q5U4P2 390 aa13.59□□□□□ -0.23
CDC42EP3-201ENST00000295324 SUMO4Q6EEV6 95 aa13.59□□□□□ -0.23
CDC42EP3-201ENST00000295324 MRPL36Q9P0J6 103 aaKnown RBP13.59□□□□□ -0.23
CDC42EP3-201ENST00000295324 SNHG12Q9BXW3 62 aa13.59□□□□□ -0.23
CDC42EP3-201ENST00000295324 Q8N1Y9 231 aa13.59□□□□□ -0.23
CDC42EP3-201ENST00000295324 ESM1Q9NQ30 184 aa13.59□□□□□ -0.23
CDC42EP3-201ENST00000295324 LGALS9BQ3B8N2 356 aa13.58□□□□□ -0.24
CDC42EP3-201ENST00000295324 LGALS9CQ6DKI2 356 aa13.58□□□□□ -0.24
CDC42EP3-201ENST00000295324 PRAC2D3DTV9 90 aa13.58□□□□□ -0.24
CDC42EP3-201ENST00000295324 UBE2BP63146 152 aa13.58□□□□□ -0.24
CDC42EP3-201ENST00000295324 TRBV20-1A0A075B6N2 111 aa13.58□□□□□ -0.24
CDC42EP3-201ENST00000295324 MRPL35Q9NZE8 188 aaKnown RBP13.58□□□□□ -0.24
CDC42EP3-201ENST00000295324 RNASE13Q5GAN3 156 aaKnown RBP13.57□□□□□ -0.24
CDC42EP3-201ENST00000295324 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.57□□□□□ -0.24
CDC42EP3-201ENST00000295324 IGKV2-29A2NJV5 120 aaPredicted RBP13.57□□□□□ -0.24
CDC42EP3-201ENST00000295324 LINC01548A6NM66 108 aa13.57□□□□□ -0.24
CDC42EP3-201ENST00000295324 SPRY2O43597 315 aa13.57□□□□□ -0.24
CDC42EP3-201ENST00000295324 Q6ZSV7 163 aa13.57□□□□□ -0.24
CDC42EP3-201ENST00000295324 A0A0J9YX75 114 aa13.57□□□□□ -0.24
CDC42EP3-201ENST00000295324 EBI3Q14213 229 aa13.57□□□□□ -0.24
CDC42EP3-201ENST00000295324 LYPD6BQ8NI32 183 aa13.57□□□□□ -0.24
CDC42EP3-201ENST00000295324 PPDPFLQ8WWR9 84 aa13.57□□□□□ -0.24
CDC42EP3-201ENST00000295324 HHLA3Q9XRX5 114 aa13.57□□□□□ -0.24
CDC42EP3-201ENST00000295324 CCDC140Q96MF4 163 aa13.56□□□□□ -0.24
CDC42EP3-201ENST00000295324 C9orf118A6NHY6 69 aa13.56□□□□□ -0.24
CDC42EP3-201ENST00000295324 MAP6D1Q9H9H5 199 aa13.56□□□□□ -0.24
CDC42EP3-201ENST00000295324 PROP1O75360 226 aa13.56□□□□□ -0.24
CDC42EP3-201ENST00000295324 LGALS9O00182 355 aa13.55□□□□□ -0.24
CDC42EP3-201ENST00000295324 DEFB4AO15263 64 aa13.55□□□□□ -0.24
CDC42EP3-201ENST00000295324 DEFB125Q8N687 156 aa13.55□□□□□ -0.24
CDC42EP3-201ENST00000295324 IGHV3-30P01768 117 aa13.55□□□□□ -0.24
CDC42EP3-201ENST00000295324 IGHV3-33P01772 117 aa13.55□□□□□ -0.24
CDC42EP3-201ENST00000295324 IGHV3-30-3P0DP02 117 aa13.55□□□□□ -0.24
CDC42EP3-201ENST00000295324 IGHV3-30-5P0DP03 117 aa13.55□□□□□ -0.24
CDC42EP3-201ENST00000295324 C10orf91Q5T1B1 145 aa13.55□□□□□ -0.24
CDC42EP3-201ENST00000295324 UBL5Q9BZL1 73 aa13.55□□□□□ -0.24
CDC42EP3-201ENST00000295324 ZNF503Q96F45 646 aa13.54□□□□□ -0.24
CDC42EP3-201ENST00000295324 IGLC2P0DOY2 106 aa13.53□□□□□ -0.24
CDC42EP3-201ENST00000295324 UTF1Q5T230 341 aa13.53□□□□□ -0.24
CDC42EP3-201ENST00000295324 AMTNQ6UX39 209 aa13.53□□□□□ -0.24
CDC42EP3-201ENST00000295324 TMEM263Q8WUH6 116 aaKnown RBP13.53□□□□□ -0.24
CDC42EP3-201ENST00000295324 MED14OSP0DP75 135 aa13.53□□□□□ -0.24
CDC42EP3-201ENST00000295324 TM2D2Q9BX73 214 aa13.53□□□□□ -0.24
CDC42EP3-201ENST00000295324 J3QQQ9 107 aa13.53□□□□□ -0.24
CDC42EP3-201ENST00000295324 SORL1Q92673 2214 aa13.53□□□□□ -0.24
CDC42EP3-201ENST00000295324 KMT2EQ8IZD2 1858 aa13.53□□□□□ -0.24
CDC42EP3-201ENST00000295324 F8W1H4 67 aa13.52□□□□□ -0.24
CDC42EP3-201ENST00000295324 IFITM1P13164 125 aa13.52□□□□□ -0.25
CDC42EP3-201ENST00000295324 HAMPP81172 84 aa13.52□□□□□ -0.25
CDC42EP3-201ENST00000295324 SPANXDQ9BXN6 97 aa13.52□□□□□ -0.25
CDC42EP3-201ENST00000295324 MYO9AB2RTY4 2548 aa13.52□□□□□ -0.25
CDC42EP3-201ENST00000295324 P0C879 139 aa13.52□□□□□ -0.25
CDC42EP3-201ENST00000295324 TRBV7-3A0A075B6L6 115 aa13.51□□□□□ -0.25
CDC42EP3-201ENST00000295324 IGLL5B9A064 214 aa13.51□□□□□ -0.25
CDC42EP3-201ENST00000295324 LY6LH3BQJ8 138 aa13.51□□□□□ -0.25
CDC42EP3-201ENST00000295324 TRACP01848 142 aa13.51□□□□□ -0.25
CDC42EP3-201ENST00000295324 Q6ZWC4 215 aa13.51□□□□□ -0.25
CDC42EP3-201ENST00000295324 C5orf38Q86SI9 138 aa13.51□□□□□ -0.25
CDC42EP3-201ENST00000295324 CAMK2N2Q96S95 79 aa13.51□□□□□ -0.25
CDC42EP3-201ENST00000295324 SLC25A29Q8N8R3 303 aa13.51□□□□□ -0.25
CDC42EP3-201ENST00000295324 SCRT2Q9NQ03 307 aa13.51□□□□□ -0.25
CDC42EP3-201ENST00000295324 CHD8Q9HCK8 2581 aa13.51□□□□□ -0.25
CDC42EP3-201ENST00000295324 K7EP34 96 aa13.51□□□□□ -0.25
CDC42EP3-201ENST00000295324 ETDBQ3ZM63 59 aa13.51□□□□□ -0.25
CDC42EP3-201ENST00000295324 PRO0255Q9UI72 69 aa13.5□□□□□ -0.25
CDC42EP3-201ENST00000295324 FGF6P10767 208 aa13.5□□□□□ -0.25
CDC42EP3-201ENST00000295324 DEFB1P60022 68 aa13.5□□□□□ -0.25
CDC42EP3-201ENST00000295324 C11orf45Q8TAV5 145 aa13.5□□□□□ -0.25
CDC42EP3-201ENST00000295324 RPL39LQ96EH5 51 aaKnown RBP13.5□□□□□ -0.25
CDC42EP3-201ENST00000295324 ALPK3Q96L96 1907 aa13.5□□□□□ -0.25
CDC42EP3-201ENST00000295324 PRRC2AP48634 2157 aaKnown RBP13.5□□□□□ -0.25
CDC42EP3-201ENST00000295324 IGLC3P0DOY3 106 aa13.5□□□□□ -0.25
CDC42EP3-201ENST00000295324 GATA1P15976 413 aaPredicted RBP13.5□□□□□ -0.25
CDC42EP3-201ENST00000295324 DEFB114Q30KQ6 69 aa13.5□□□□□ -0.25
CDC42EP3-201ENST00000295324 IGLV10-54A0A075B6I4 117 aa13.49□□□□□ -0.25
CDC42EP3-201ENST00000295324 TNRC6AQ8NDV7 1962 aaKnown RBP13.49□□□□□ -0.25
CDC42EP3-201ENST00000295324 PTPRSQ13332 1948 aa13.49□□□□□ -0.25
CDC42EP3-201ENST00000295324 K7EP13 123 aa13.49□□□□□ -0.25
CDC42EP3-201ENST00000295324 TAL2Q16559 108 aa13.49□□□□□ -0.25
CDC42EP3-201ENST00000295324 MSRB1Q9NZV6 116 aa13.49□□□□□ -0.25
CDC42EP3-201ENST00000295324 PCNX3Q9H6A9 2034 aa13.49□□□□□ -0.25
CDC42EP3-201ENST00000295324 CEP295Q9C0D2 2601 aa13.49□□□□□ -0.25
CDC42EP3-201ENST00000295324 COX7A2LO14548 114 aa13.48□□□□□ -0.25
CDC42EP3-201ENST00000295324 TRAV13-2A0A0B4J235 113 aa13.48□□□□□ -0.25
CDC42EP3-201ENST00000295324 HILS1P60008 231 aa13.48□□□□□ -0.25
CDC42EP3-201ENST00000295324 NPSP0C0P6 89 aa13.48□□□□□ -0.25
CDC42EP3-201ENST00000295324 IGKV1D-37A0A075B6S9 117 aa13.48□□□□□ -0.25
CDC42EP3-201ENST00000295324 TRBV6-1A0A0K0K1D8 114 aa13.48□□□□□ -0.25
CDC42EP3-201ENST00000295324 CDSNQ15517 529 aa13.48□□□□□ -0.25
CDC42EP3-201ENST00000295324 PSMG3-AS1Q96PY0 264 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms