RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 C1orf43Q9BWL3 253 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 MRPS16Q9Y3D3 137 aaKnown RBP3.69□□□□□ -1.82
UBR1-201ENST00000290650 RELNP78509 3460 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 TRAV8-2A0A0B4J237 113 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 TRBV7-9A0A0J9YWB2 115 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 VCYO14598 125 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 EDN2P20800 178 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 FASNP49327 2511 aaKnown RBP3.68□□□□□ -1.82
UBR1-201ENST00000290650 LINC01619G3V211 115 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 NDUFA4O00483 81 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 DEFB4AO15263 64 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 NDUFC2O95298 119 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 LINC00158P58513 81 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 DPH3Q96FX2 82 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 COL27A1Q8IZC6 1860 aaPredicted RBP3.68□□□□□ -1.82
UBR1-201ENST00000290650 SPINK8P0C7L1 97 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 MALP21145 153 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 IGF2-ASQ6U949 168 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 ZNRF2Q8NHG8 242 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 SS18L2Q9UHA2 77 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 P0DMU3 169 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 FAM231AP0DMU4 169 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 FAM231CP0DMU5 169 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 HLA-DRB4P13762 266 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 OPRPNQ99935 248 aaPredicted RBP3.68□□□□□ -1.82
UBR1-201ENST00000290650 HLA-DRB4X5D2U9 266 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 PRSS29PA6NIE9 313 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 CCDC140Q96MF4 163 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 DSCR9P59020 149 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 ZNF747Q9BV97 191 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 IGHV1OR15-1A0A075B7D0 117 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 TRAV8-4A0A0B4J246 113 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 AZU1P20160 251 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 CT83Q5H943 113 aa3.68□□□□□ -1.82
UBR1-201ENST00000290650 NOP10Q9NPE3 64 aaKnown RBP3.68□□□□□ -1.82
UBR1-201ENST00000290650 CRIP1P50238 77 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 GAGE6Q13070 117 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 BVES-AS1Q5T3Y7 98 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 Q8N8P6 123 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 SIRPDQ9H106 197 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 MDFICQ9P1T7 246 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 WI2-2373I1.2A0A1W2PRP0 233 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 GAS8-AS1O95177 125 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 INSP01308 110 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 PLNP26678 52 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 MUC4Q99102 2169 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 C5orf47Q569G3 176 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 DEFB121Q5J5C9 76 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 C10orf105Q8TEF2 133 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 C20orf173Q96LM9 149 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 PRADC1Q9BSG0 188 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 A0A0J9YY99 117 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 H3BMG7 143 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 H3BRM9 83 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 PFN2P35080 140 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 DAND5Q8N907 189 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 OR9G4Q8NGQ1 327 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 CSMD1Q96PZ7 3565 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 DNAL4O96015 105 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 LMO4P61968 165 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 PAPPA-AS1Q5QFB9 102 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 CEMP1Q6PRD7 247 aaPredicted RBP3.67□□□□□ -1.82
UBR1-201ENST00000290650 ADAMTSL5Q6ZMM2 481 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 C18orf65Q6ZTR6 163 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 C8orf31Q8N9H6 132 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 SMG1Q96Q15 3661 aaKnown RBP3.67□□□□□ -1.82
UBR1-201ENST00000290650 EPG5Q9HCE0 2579 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 LINC01549A6NIU2 74 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 COX8AP10176 69 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 C9orf153Q5TBE3 101 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 SMIM2Q9BVW6 85 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 SMPXQ9UHP9 88 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 SEC11AP67812 179 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 SMIM20Q8N5G0 67 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 CST9LQ9H4G1 147 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 VPREB3Q9UKI3 123 aa3.67□□□□□ -1.82
UBR1-201ENST00000290650 A0A1W2PPR1 153 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 TIMM21Q9BVV7 248 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 ZZEF1O43149 2961 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 TRAV8-3A0A0A6YYJ7 113 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 CTRLP40313 264 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 Q8N1Y9 231 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 GATD1Q8NB37 220 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 SMAD5-AS1Q9Y6J3 95 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 SUMO4Q6EEV6 95 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 ERG28Q9UKR5 140 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 V9GYY9 64 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 C2orf70A6NJV1 201 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 K7EP13 123 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 U3KQE9 123 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 M0R2P5 195 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 RPL36AP83881 106 aaKnown RBP3.66□□□□□ -1.82
UBR1-201ENST00000290650 RPL36ALQ969Q0 106 aaKnown RBP3.66□□□□□ -1.82
UBR1-201ENST00000290650 C9JAW5 83 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 CCL24O00175 119 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 PAX4O43316 350 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 CD5LO43866 347 aa3.66□□□□□ -1.82
UBR1-201ENST00000290650 KLF5Q13887 457 aaPredicted RBP3.66□□□□□ -1.82
UBR1-201ENST00000290650 MYMXA0A1B0GTQ4 84 aa3.65□□□□□ -1.82
UBR1-201ENST00000290650 C16orf54Q6UWD8 224 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms