RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 IGHV7-81A0A0B4J1V7 117 aa13.21□□□□□ -0.29
SRF-201ENST00000265354 INS-IGF2F8WCM5 200 aa13.21□□□□□ -0.29
SRF-201ENST00000265354 LINC01548A6NM66 108 aa13.21□□□□□ -0.29
SRF-201ENST00000265354 CHCHD5Q9BSY4 110 aa13.21□□□□□ -0.29
SRF-201ENST00000265354 PRO1854Q9UHT4 67 aa13.21□□□□□ -0.29
SRF-201ENST00000265354 PKIGQ9Y2B9 76 aa13.21□□□□□ -0.29
SRF-201ENST00000265354 WDFY3Q8IZQ1 3526 aa13.21□□□□□ -0.29
SRF-201ENST00000265354 XGP55808 180 aa13.21□□□□□ -0.3
SRF-201ENST00000265354 TRAV13-1A0A0B4J241 112 aa13.2□□□□□ -0.3
SRF-201ENST00000265354 C19orf54Q5BKX5 351 aa13.2□□□□□ -0.3
SRF-201ENST00000265354 LINC01587Q99440 93 aa13.2□□□□□ -0.3
SRF-201ENST00000265354 OPRPNQ99935 248 aaPredicted RBP13.2□□□□□ -0.3
SRF-201ENST00000265354 M0R1W7 72 aa13.19□□□□□ -0.3
SRF-201ENST00000265354 ZNF493Q6ZR52 646 aa13.19□□□□□ -0.3
SRF-201ENST00000265354 TRBV7-1A0A0A6YYK4 115 aa13.19□□□□□ -0.3
SRF-201ENST00000265354 IGHV3-38A0A0C4DH36 116 aa13.19□□□□□ -0.3
SRF-201ENST00000265354 J3KT08 172 aa13.19□□□□□ -0.3
SRF-201ENST00000265354 J3QQQ9 107 aa13.19□□□□□ -0.3
SRF-201ENST00000265354 IGHV3-16A0A0C4DH30 117 aa13.19□□□□□ -0.3
SRF-201ENST00000265354 FAM110DQ8TAY7 271 aaPredicted RBP13.19□□□□□ -0.3
SRF-201ENST00000265354 IGFL2Q6UWQ7 119 aa13.18□□□□□ -0.3
SRF-201ENST00000265354 PTPRBP23467 1997 aa13.18□□□□□ -0.3
SRF-201ENST00000265354 WI2-2373I1.2A0A1W2PRP0 233 aa13.18□□□□□ -0.3
SRF-201ENST00000265354 MINOS1Q5TGZ0 78 aa13.18□□□□□ -0.3
SRF-201ENST00000265354 MINOS1-NBL1R4GNA1 71 aa13.18□□□□□ -0.3
SRF-201ENST00000265354 C5orf47Q569G3 176 aa13.18□□□□□ -0.3
SRF-201ENST00000265354 IGHV3-53P01767 116 aa13.17□□□□□ -0.3
SRF-201ENST00000265354 IGFL3Q6UXB1 125 aa13.17□□□□□ -0.3
SRF-201ENST00000265354 LINC00574Q9H8X3 128 aa13.17□□□□□ -0.3
SRF-201ENST00000265354 S100A7L2Q5SY68 101 aa13.17□□□□□ -0.3
SRF-201ENST00000265354 MOB4Q9Y3A3 225 aa13.17□□□□□ -0.3
SRF-201ENST00000265354 MTORP42345 2549 aa13.16□□□□□ -0.3
SRF-201ENST00000265354 A4D1N5 150 aa13.16□□□□□ -0.3
SRF-201ENST00000265354 COX6B1P14854 86 aa13.16□□□□□ -0.3
SRF-201ENST00000265354 C8orf31Q8N9H6 132 aa13.16□□□□□ -0.3
SRF-201ENST00000265354 MAPK1IP1LQ8NDC0 245 aa13.16□□□□□ -0.3
SRF-201ENST00000265354 CARD19Q96LW7 228 aa13.16□□□□□ -0.3
SRF-201ENST00000265354 TIMM21Q9BVV7 248 aa13.16□□□□□ -0.3
SRF-201ENST00000265354 TMEM126AQ9H061 195 aa13.16□□□□□ -0.3
SRF-201ENST00000265354 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.15□□□□□ -0.3
SRF-201ENST00000265354 A0A096LNJ9 63 aa13.15□□□□□ -0.3
SRF-201ENST00000265354 C11orf86A6NJI1 115 aa13.15□□□□□ -0.3
SRF-201ENST00000265354 SRSF2Q01130 221 aaKnown RBP13.15□□□□□ -0.3
SRF-201ENST00000265354 PLEKHB2Q96CS7 222 aa13.15□□□□□ -0.3
SRF-201ENST00000265354 TAL2Q16559 108 aa13.15□□□□□ -0.3
SRF-201ENST00000265354 HIGD1BQ9P298 99 aa13.15□□□□□ -0.3
SRF-201ENST00000265354 CENPEQ02224 2701 aa13.15□□□□□ -0.3
SRF-201ENST00000265354 PRB1P04280 392 aa13.15□□□□□ -0.31
SRF-201ENST00000265354 LGALS1P09382 135 aaKnown RBP13.15□□□□□ -0.31
SRF-201ENST00000265354 SYNJ2BPP57105 145 aa13.15□□□□□ -0.31
SRF-201ENST00000265354 TRPT1Q86TN4 253 aaKnown RBP13.15□□□□□ -0.31
SRF-201ENST00000265354 A0A0J9YXV3 536 aa13.14□□□□□ -0.31
SRF-201ENST00000265354 A0A1W2PRX2 142 aa13.13□□□□□ -0.31
SRF-201ENST00000265354 RBAKDNA6NC62 111 aa13.13□□□□□ -0.31
SRF-201ENST00000265354 UBE2L6O14933 153 aa13.13□□□□□ -0.31
SRF-201ENST00000265354 RNF185Q96GF1 192 aa13.13□□□□□ -0.31
SRF-201ENST00000265354 IGLC6P0CF74 106 aa13.13□□□□□ -0.31
SRF-201ENST00000265354 BAALCQ8WXS3 180 aa13.13□□□□□ -0.31
SRF-201ENST00000265354 CCL19Q99731 98 aa13.13□□□□□ -0.31
SRF-201ENST00000265354 TRBV12-3P01733 135 aa13.12□□□□□ -0.31
SRF-201ENST00000265354 DAND5Q8N907 189 aa13.12□□□□□ -0.31
SRF-201ENST00000265354 Q8N9W7 124 aa13.12□□□□□ -0.31
SRF-201ENST00000265354 E9PLD3 99 aa13.12□□□□□ -0.31
SRF-201ENST00000265354 OOSP1A8MZH6 123 aa13.12□□□□□ -0.31
SRF-201ENST00000265354 UNQ9165/PRO28630Q6UXU0 137 aa13.12□□□□□ -0.31
SRF-201ENST00000265354 C11orf21Q9P2W6 132 aa13.12□□□□□ -0.31
SRF-201ENST00000265354 ZFP36P26651 326 aaKnown RBP13.12□□□□□ -0.31
SRF-201ENST00000265354 ZNF415Q09FC8 603 aa13.11□□□□□ -0.31
SRF-201ENST00000265354 DAZ1Q9NQZ3 744 aaKnown RBP13.11□□□□□ -0.31
SRF-201ENST00000265354 SMAD5-AS1Q9Y6J3 95 aa13.11□□□□□ -0.31
SRF-201ENST00000265354 LRRK2Q5S007 2527 aa13.11□□□□□ -0.31
SRF-201ENST00000265354 BLCAPP62952 87 aa13.11□□□□□ -0.31
SRF-201ENST00000265354 UBE2E2Q96LR5 201 aa13.11□□□□□ -0.31
SRF-201ENST00000265354 C11orf68Q9H3H3 251 aaKnown RBP13.11□□□□□ -0.31
SRF-201ENST00000265354 UBE2E1P51965 193 aa13.11□□□□□ -0.31
SRF-201ENST00000265354 GATD1Q8NB37 220 aa13.11□□□□□ -0.31
SRF-201ENST00000265354 TRAV4A0A0B4J268 109 aa13.1□□□□□ -0.31
SRF-201ENST00000265354 A0A0U1RQV1 116 aa13.1□□□□□ -0.31
SRF-201ENST00000265354 UFSP1Q6NVU6 142 aa13.1□□□□□ -0.31
SRF-201ENST00000265354 FSTL3O95633 263 aa13.1□□□□□ -0.31
SRF-201ENST00000265354 CFC1BP0CG36 223 aa13.1□□□□□ -0.31
SRF-201ENST00000265354 CFC1P0CG37 223 aa13.1□□□□□ -0.31
SRF-201ENST00000265354 MSRB2Q9Y3D2 182 aa13.1□□□□□ -0.31
SRF-201ENST00000265354 SPATA25Q9BR10 227 aa13.09□□□□□ -0.31
SRF-201ENST00000265354 MUSTN1Q8IVN3 82 aa13.09□□□□□ -0.31
SRF-201ENST00000265354 NDUFA12Q9UI09 145 aa13.09□□□□□ -0.31
SRF-201ENST00000265354 COL5A1P20908 1838 aaPredicted RBP13.09□□□□□ -0.31
SRF-201ENST00000265354 ADGRG4Q8IZF6 3080 aa13.09□□□□□ -0.31
SRF-201ENST00000265354 HHLA3Q9XRX5 114 aa13.09□□□□□ -0.31
SRF-201ENST00000265354 TRGV11A0A075B6L2 103 aa13.09□□□□□ -0.31
SRF-201ENST00000265354 CRYGBP07316 175 aa13.08□□□□□ -0.32
SRF-201ENST00000265354 TM2D2Q9BX73 214 aa13.08□□□□□ -0.32
SRF-201ENST00000265354 HOXB4P17483 251 aaPredicted RBP13.08□□□□□ -0.32
SRF-201ENST00000265354 TCL1BO95988 128 aa13.07□□□□□ -0.32
SRF-201ENST00000265354 DEFB131AP59861 70 aa13.07□□□□□ -0.32
SRF-201ENST00000265354 LY6G5BQ8NDX9 201 aa13.07□□□□□ -0.32
SRF-201ENST00000265354 NPBQ8NG41 125 aa13.07□□□□□ -0.32
SRF-201ENST00000265354 KALRNO60229 2985 aa13.07□□□□□ -0.32
SRF-201ENST00000265354 CEMP1Q6PRD7 247 aaPredicted RBP13.07□□□□□ -0.32
SRF-201ENST00000265354 ZNF462Q96JM2 2506 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms