RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 TRAV26-2A0A0B4J265 109 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 TRBV30A0A0K0K1B3 111 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 IBA57-AS1B1ANH7 110 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 K7ENP7 123 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 EFNA2O43921 213 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 ANKRD39Q53RE8 183 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 TEX22C9J3V5 150 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 H0Y9J4 135 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 IGKV1-39P01597 117 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 IGKV1D-39P04432 117 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 GATA1P15976 413 aaPredicted RBP4.27□□□□□ -1.73
XRN1-201ENST00000264951 NRACQ8N912 160 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 C1orf147Q96MC9 270 aaPredicted RBP4.27□□□□□ -1.73
XRN1-201ENST00000264951 BDP1A6H8Y1 2624 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 GNLYP22749 145 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 RNF183Q96D59 192 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 IGLV3-9A0A075B6K5 115 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 UNQ6494/PRO21346Q6UXR6 183 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 A0A0J9YXV3 536 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 WFDC12Q8WWY7 111 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 GP9P14770 177 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 LTBP1Q14766 1721 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 NRXN2Q9P2S2 1712 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 C20orf203Q8NBC4 194 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 C15orf65H3BRN8 121 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 IGFL3Q6UXB1 125 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 K7EN84 100 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 SPAG11BQ08648 103 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 GPR179Q6PRD1 2367 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 INSL3P51460 131 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 TFF2Q03403 129 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 DEFB105AQ8NG35 78 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 ZNF706Q9Y5V0 76 aaPredicted RBP4.26□□□□□ -1.73
XRN1-201ENST00000264951 IGHV3-16A0A0C4DH30 117 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 IGLC6P0CF74 106 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 C9orf66Q5T8R8 295 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 NPBQ8NG41 125 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 VPREB3Q9UKI3 123 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 UBE2D4Q9Y2X8 147 aa4.26□□□□□ -1.73
XRN1-201ENST00000264951 TRAV12-2A0A075B6T6 113 aa4.25□□□□□ -1.73
XRN1-201ENST00000264951 LOXP28300 417 aaPredicted RBP4.25□□□□□ -1.73
XRN1-201ENST00000264951 ATP1A1-AS1Q5TC04 95 aa4.25□□□□□ -1.73
XRN1-201ENST00000264951 TRAV23DV6A0A075B6W5 121 aa4.25□□□□□ -1.73
XRN1-201ENST00000264951 DHRS4-AS1Q9P1J3 65 aa4.25□□□□□ -1.73
XRN1-201ENST00000264951 TRPM7Q96QT4 1865 aa4.25□□□□□ -1.73
XRN1-201ENST00000264951 B3GALT5-AS1P59052 145 aa4.25□□□□□ -1.73
XRN1-201ENST00000264951 GYPEP15421 78 aa4.25□□□□□ -1.73
XRN1-201ENST00000264951 C17orf58Q2M2W7 97 aa4.25□□□□□ -1.73
XRN1-201ENST00000264951 IGKV1OR2-108A0A075B7D4 117 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 WISP1O95388 367 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 IGHV3-30-3P0DP02 117 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 C5orf24Q7Z6I8 188 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 DSCAML1Q8TD84 2053 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 WI2-2373I1.2A0A1W2PRP0 233 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 BPESC1Q9GZL8 116 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 COL11A2P13942 1736 aaPredicted RBP4.24□□□□□ -1.73
XRN1-201ENST00000264951 IGHV3-38A0A0C4DH36 116 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 TCL1BO95988 128 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 C5orf38Q86SI9 138 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 IGHV4-28A0A0C4DH34 117 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 IGLV1-44P01699 117 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 NOP10Q9NPE3 64 aaKnown RBP4.24□□□□□ -1.73
XRN1-201ENST00000264951 TECTAO75443 2155 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 IGFL4Q6B9Z1 124 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 BRD3OSQ6XYD6 125 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 SBF2Q86WG5 1849 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 MIR7-3HGQ8N6C7 128 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.24□□□□□ -1.73
XRN1-201ENST00000264951 IGKV2-29A2NJV5 120 aaPredicted RBP4.24□□□□□ -1.73
XRN1-201ENST00000264951 CLPSP04118 112 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 Q6JHZ5 121 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 WIPF3A6NGB9 483 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 SMIM9A6NGZ8 99 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 GPHB5Q86YW7 130 aa4.24□□□□□ -1.73
XRN1-201ENST00000264951 LYNX1G3V0Z9 82 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 IGLV3-1P01715 115 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 LYNX1P0DP58 116 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 YPEL4Q96NS1 127 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 LCTP09848 1927 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 A0A0G2JNJ9 132 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 TMEM263Q8WUH6 116 aaKnown RBP4.23□□□□□ -1.73
XRN1-201ENST00000264951 Q9UFV3 132 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 BRCA1P38398 1863 aaKnown RBP4.23□□□□□ -1.73
XRN1-201ENST00000264951 A0A0G2JMZ2 1700 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 LRRC37A2A6NM11 1700 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 LRRC37AA6NMS7 1700 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 A0A087WV48 116 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 PMAIP1Q13794 54 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 TRAV7A0A075B6U4 112 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 SEM1Q6ZVN7 128 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 MPLKIPQ8TAP9 179 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 KLK5Q9Y337 293 aaPredicted RBP4.23□□□□□ -1.73
XRN1-201ENST00000264951 CENPVL3A0A0U1RRI6 287 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 PRO0255Q9UI72 69 aa4.23□□□□□ -1.73
XRN1-201ENST00000264951 IGLV11-55A0A075B6I3 123 aa4.22□□□□□ -1.73
XRN1-201ENST00000264951 MLANAQ16655 118 aa4.22□□□□□ -1.73
XRN1-201ENST00000264951 UBR3Q6ZT12 1888 aa4.22□□□□□ -1.73
XRN1-201ENST00000264951 C2orf70A6NJV1 201 aa4.22□□□□□ -1.73
XRN1-201ENST00000264951 MT-ATP8P03928 68 aa4.22□□□□□ -1.73
XRN1-201ENST00000264951 COX17Q14061 63 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms