RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 RRN3P1Q2M238 152 aa17.24■□□□□ 0.35
EPCAM-201ENST00000263735 PDZD11Q5EBL8 140 aa17.24■□□□□ 0.35
EPCAM-201ENST00000263735 NDUFAF3Q9BU61 184 aa17.24■□□□□ 0.35
EPCAM-201ENST00000263735 MGPP08493 103 aa17.24■□□□□ 0.35
EPCAM-201ENST00000263735 SAMD5Q5TGI4 173 aa17.24■□□□□ 0.35
EPCAM-201ENST00000263735 G3V4G9 280 aa17.23■□□□□ 0.35
EPCAM-201ENST00000263735 NPYP01303 97 aa17.22■□□□□ 0.35
EPCAM-201ENST00000263735 LINC00315P59091 139 aa17.22■□□□□ 0.35
EPCAM-201ENST00000263735 A0A087WWL8 130 aa17.21■□□□□ 0.35
EPCAM-201ENST00000263735 IFITM10A6NMD0 228 aa17.21■□□□□ 0.35
EPCAM-201ENST00000263735 A8MWV9 139 aa17.21■□□□□ 0.35
EPCAM-201ENST00000263735 NUPR1O60356 82 aa17.21■□□□□ 0.35
EPCAM-201ENST00000263735 TRAV26-2A0A0B4J265 109 aa17.21■□□□□ 0.35
EPCAM-201ENST00000263735 A8MZ25 164 aa17.21■□□□□ 0.35
EPCAM-201ENST00000263735 CRYGDP07320 174 aa17.21■□□□□ 0.35
EPCAM-201ENST00000263735 RASL10AQ92737 203 aa17.21■□□□□ 0.35
EPCAM-201ENST00000263735 TNFRSF6BO95407 300 aa17.2■□□□□ 0.34
EPCAM-201ENST00000263735 FAM74A4Q5TZK3 123 aa17.2■□□□□ 0.34
EPCAM-201ENST00000263735 GAS8-AS1O95177 125 aa17.19■□□□□ 0.34
EPCAM-201ENST00000263735 DAZ2Q13117 558 aaKnown RBP17.19■□□□□ 0.34
EPCAM-201ENST00000263735 NIT1Q86X76 327 aa17.19■□□□□ 0.34
EPCAM-201ENST00000263735 LURAP1LQ8IV03 231 aa17.19■□□□□ 0.34
EPCAM-201ENST00000263735 TMEM18Q96B42 140 aa17.19■□□□□ 0.34
EPCAM-201ENST00000263735 CHCHD1Q96BP2 118 aaKnown RBP17.19■□□□□ 0.34
EPCAM-201ENST00000263735 HIST1H2BLQ99880 126 aa17.19■□□□□ 0.34
EPCAM-201ENST00000263735 SAMD10Q9BYL1 202 aa17.19■□□□□ 0.34
EPCAM-201ENST00000263735 PLAC8L1A1L4L8 177 aa17.18■□□□□ 0.34
EPCAM-201ENST00000263735 SMIM9A6NGZ8 99 aa17.18■□□□□ 0.34
EPCAM-201ENST00000263735 LGALS9BQ3B8N2 356 aa17.18■□□□□ 0.34
EPCAM-201ENST00000263735 RNASEKQ6P5S7 137 aaKnown RBP17.18■□□□□ 0.34
EPCAM-201ENST00000263735 NRACQ8N912 160 aa17.18■□□□□ 0.34
EPCAM-201ENST00000263735 URB1-AS1Q96HZ7 61 aa17.18■□□□□ 0.34
EPCAM-201ENST00000263735 MAP1LC3AQ9H492 121 aa17.18■□□□□ 0.34
EPCAM-201ENST00000263735 MRPL16Q9NX20 251 aaKnown RBP17.18■□□□□ 0.34
EPCAM-201ENST00000263735 FABP4P15090 132 aa17.18■□□□□ 0.34
EPCAM-201ENST00000263735 GATA1P15976 413 aaPredicted RBP17.18■□□□□ 0.34
EPCAM-201ENST00000263735 LINC00614P0C842 121 aa17.17■□□□□ 0.34
EPCAM-201ENST00000263735 PRSS3P2Q8NHM4 247 aa17.17■□□□□ 0.34
EPCAM-201ENST00000263735 HSBP1O75506 76 aa17.16■□□□□ 0.34
EPCAM-201ENST00000263735 PPP1R17O96001 155 aa17.16■□□□□ 0.34
EPCAM-201ENST00000263735 ZNF56Q15929 161 aa17.16■□□□□ 0.34
EPCAM-201ENST00000263735 DEFB135Q30KP9 77 aa17.16■□□□□ 0.34
EPCAM-201ENST00000263735 X6R8D5 127 aa17.16■□□□□ 0.34
EPCAM-201ENST00000263735 PRSS47A8MTI9 375 aa17.16■□□□□ 0.34
EPCAM-201ENST00000263735 AKR1D1P51857 326 aa17.16■□□□□ 0.34
EPCAM-201ENST00000263735 SUMO4Q6EEV6 95 aa17.16■□□□□ 0.34
EPCAM-201ENST00000263735 TRGV1A0A0A0MS02 117 aa17.15■□□□□ 0.34
EPCAM-201ENST00000263735 F5H697 171 aa17.15■□□□□ 0.34
EPCAM-201ENST00000263735 CFAP126Q5VTH2 177 aa17.15■□□□□ 0.34
EPCAM-201ENST00000263735 PACRGQ96M98 296 aaPredicted RBP17.15■□□□□ 0.34
EPCAM-201ENST00000263735 OVOL2Q9BRP0 275 aa17.15■□□□□ 0.34
EPCAM-201ENST00000263735 LOC389332A0A1B0GUA5 103 aa17.14■□□□□ 0.33
EPCAM-201ENST00000263735 RHODO00212 210 aa17.14■□□□□ 0.33
EPCAM-201ENST00000263735 IFI27P40305 119 aaPredicted RBP17.14■□□□□ 0.33
EPCAM-201ENST00000263735 UFSP1Q6NVU6 142 aa17.14■□□□□ 0.33
EPCAM-201ENST00000263735 Q6ZWC4 215 aa17.14■□□□□ 0.33
EPCAM-201ENST00000263735 NOP10Q9NPE3 64 aaKnown RBP17.14■□□□□ 0.33
EPCAM-201ENST00000263735 RS1O15537 224 aa17.13■□□□□ 0.33
EPCAM-201ENST00000263735 FA2HQ7L5A8 372 aa17.13■□□□□ 0.33
EPCAM-201ENST00000263735 NXT2Q9NPJ8 142 aaKnown RBP17.13■□□□□ 0.33
EPCAM-201ENST00000263735 AP5S1Q9NUS5 200 aa17.13■□□□□ 0.33
EPCAM-201ENST00000263735 AMTP48728 403 aa17.13■□□□□ 0.33
EPCAM-201ENST00000263735 Q6ZTI0 123 aa17.12■□□□□ 0.33
EPCAM-201ENST00000263735 C20orf78Q9BR46 151 aa17.12■□□□□ 0.33
EPCAM-201ENST00000263735 EDA2RQ9HAV5 297 aa17.12■□□□□ 0.33
EPCAM-201ENST00000263735 PMCHP20382 165 aa17.11■□□□□ 0.33
EPCAM-201ENST00000263735 ZFP2Q6ZN57 461 aa17.11■□□□□ 0.33
EPCAM-201ENST00000263735 RPL39LQ96EH5 51 aaKnown RBP17.11■□□□□ 0.33
EPCAM-201ENST00000263735 RNF183Q96D59 192 aa17.1■□□□□ 0.33
EPCAM-201ENST00000263735 DNAH3Q8TD57 4116 aa17.1■□□□□ 0.33
EPCAM-201ENST00000263735 M0QY20 66 aa17.1■□□□□ 0.33
EPCAM-201ENST00000263735 SUMO2P61956 95 aaKnown RBP17.1■□□□□ 0.33
EPCAM-201ENST00000263735 OR10D4PQ8NGN7 298 aa17.1■□□□□ 0.33
EPCAM-201ENST00000263735 OR11H2Q8NH07 326 aa17.1■□□□□ 0.33
EPCAM-201ENST00000263735 LINC01546A6NGU7 62 aa17.09■□□□□ 0.33
EPCAM-201ENST00000263735 H7C1H1 209 aa17.09■□□□□ 0.33
EPCAM-201ENST00000263735 RIPPLY3P57055 190 aa17.09■□□□□ 0.33
EPCAM-201ENST00000263735 FAM19A2Q8N3H0 131 aa17.09■□□□□ 0.33
EPCAM-201ENST00000263735 Q8N8P6 123 aa17.09■□□□□ 0.33
EPCAM-201ENST00000263735 IGLV2-18A0A075B6J9 118 aa17.08■□□□□ 0.32
EPCAM-201ENST00000263735 TRAV4A0A0B4J268 109 aa17.08■□□□□ 0.32
EPCAM-201ENST00000263735 OR4C5Q8NGB2 326 aa17.08■□□□□ 0.32
EPCAM-201ENST00000263735 SMIM2Q9BVW6 85 aa17.08■□□□□ 0.32
EPCAM-201ENST00000263735 IGHV3-73A0A0B4J1V6 119 aa17.07■□□□□ 0.32
EPCAM-201ENST00000263735 IGHV1-24A0A0C4DH33 117 aa17.07■□□□□ 0.32
EPCAM-201ENST00000263735 TRBV6-5A0A0K0K1A5 114 aa17.07■□□□□ 0.32
EPCAM-201ENST00000263735 MIFP14174 115 aa17.07■□□□□ 0.32
EPCAM-201ENST00000263735 KPRPQ5T749 579 aaPredicted RBP17.07■□□□□ 0.32
EPCAM-201ENST00000263735 RPL32P62910 135 aaKnown RBP17.06■□□□□ 0.32
EPCAM-201ENST00000263735 ST20Q9HBF5 79 aa17.06■□□□□ 0.32
EPCAM-201ENST00000263735 CIDEAO60543 219 aa17.05■□□□□ 0.32
EPCAM-201ENST00000263735 NIT2Q9NQR4 276 aa17.05■□□□□ 0.32
EPCAM-201ENST00000263735 TP53TG1Q9Y2A0 90 aa17.05■□□□□ 0.32
EPCAM-201ENST00000263735 GAGE12BA1L429 117 aa17.04■□□□□ 0.32
EPCAM-201ENST00000263735 GAGE7O76087 117 aa17.04■□□□□ 0.32
EPCAM-201ENST00000263735 IGHV3-53P01767 116 aa17.04■□□□□ 0.32
EPCAM-201ENST00000263735 GAGE12FP0CL80 117 aa17.04■□□□□ 0.32
EPCAM-201ENST00000263735 GAGE12GP0CL81 117 aa17.04■□□□□ 0.32
EPCAM-201ENST00000263735 GAGE12IP0CL82 117 aa17.04■□□□□ 0.32
EPCAM-201ENST00000263735 EMP1P54849 157 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms