RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 Q6ZPA2 131 aa8.33□□□□□ -1.08
CD44-201ENST00000263398 C9orf47Q6ZRZ4 202 aa8.33□□□□□ -1.08
CD44-201ENST00000263398 RNF152Q8N8N0 203 aa8.33□□□□□ -1.08
CD44-201ENST00000263398 Q9H8V8 135 aa8.33□□□□□ -1.08
CD44-201ENST00000263398 CCDC168Q8NDH2 2452 aa8.33□□□□□ -1.08
CD44-201ENST00000263398 IGHV4-38-2P0DP08 117 aa8.32□□□□□ -1.08
CD44-201ENST00000263398 C5orf56Q8N8D9 126 aa8.32□□□□□ -1.08
CD44-201ENST00000263398 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.32□□□□□ -1.08
CD44-201ENST00000263398 IGKV2-29A2NJV5 120 aaPredicted RBP8.32□□□□□ -1.08
CD44-201ENST00000263398 C19orf71A6NCJ1 209 aa8.32□□□□□ -1.08
CD44-201ENST00000263398 ANGP03950 147 aaKnown RBP8.32□□□□□ -1.08
CD44-201ENST00000263398 IFITM1P13164 125 aa8.32□□□□□ -1.08
CD44-201ENST00000263398 Q8N7P7 452 aa8.32□□□□□ -1.08
CD44-201ENST00000263398 HIGD1BQ9P298 99 aa8.32□□□□□ -1.08
CD44-201ENST00000263398 NAV3Q8IVL0 2385 aa8.32□□□□□ -1.08
CD44-201ENST00000263398 A0A0J9YXV3 536 aa8.32□□□□□ -1.08
CD44-201ENST00000263398 PRSS47A8MTI9 375 aa8.32□□□□□ -1.08
CD44-201ENST00000263398 CRIP3Q6Q6R5 217 aa8.32□□□□□ -1.08
CD44-201ENST00000263398 NOP10Q9NPE3 64 aaKnown RBP8.32□□□□□ -1.08
CD44-201ENST00000263398 XIRP2A4UGR9 3374 aa8.31□□□□□ -1.08
CD44-201ENST00000263398 BRWD1-AS2P59051 145 aa8.31□□□□□ -1.08
CD44-201ENST00000263398 ZNF503Q96F45 646 aa8.31□□□□□ -1.08
CD44-201ENST00000263398 WISP2O76076 250 aa8.31□□□□□ -1.08
CD44-201ENST00000263398 IGHV4-30-2A0A087WSY4 118 aa8.31□□□□□ -1.08
CD44-201ENST00000263398 TEX48A0A1B0GUV7 120 aa8.31□□□□□ -1.08
CD44-201ENST00000263398 K7EMT4 169 aa8.31□□□□□ -1.08
CD44-201ENST00000263398 CCL24O00175 119 aa8.31□□□□□ -1.08
CD44-201ENST00000263398 HERV-K104P63124 156 aa8.31□□□□□ -1.08
CD44-201ENST00000263398 DEFB136Q30KP8 78 aa8.31□□□□□ -1.08
CD44-201ENST00000263398 SLC25A29Q8N8R3 303 aa8.31□□□□□ -1.08
CD44-201ENST00000263398 FANCD2OSQ96PS1 177 aa8.31□□□□□ -1.08
CD44-201ENST00000263398 LINC00574Q9H8X3 128 aa8.31□□□□□ -1.08
CD44-201ENST00000263398 TRAV12-1A0A0B4J245 112 aa8.3□□□□□ -1.08
CD44-201ENST00000263398 HAMPP81172 84 aa8.3□□□□□ -1.08
CD44-201ENST00000263398 NKAPP1Q8N9T2 125 aa8.3□□□□□ -1.08
CD44-201ENST00000263398 BPTFQ12830 3046 aa8.3□□□□□ -1.08
CD44-201ENST00000263398 NAV2Q8IVL1 2488 aa8.3□□□□□ -1.08
CD44-201ENST00000263398 IGKV1D-37A0A075B6S9 117 aa8.3□□□□□ -1.08
CD44-201ENST00000263398 CRLF1O75462 422 aa8.3□□□□□ -1.08
CD44-201ENST00000263398 TNRC6AQ8NDV7 1962 aaKnown RBP8.3□□□□□ -1.08
CD44-201ENST00000263398 MED14OSP0DP75 135 aa8.3□□□□□ -1.08
CD44-201ENST00000263398 FBXL19-AS1Q494R0 122 aa8.3□□□□□ -1.08
CD44-201ENST00000263398 ZNF295-AS1Q8N0V1 137 aa8.3□□□□□ -1.08
CD44-201ENST00000263398 C10orf105Q8TEF2 133 aa8.3□□□□□ -1.08
CD44-201ENST00000263398 IGHG4P01861 327 aa8.3□□□□□ -1.08
CD44-201ENST00000263398 FXYD2P54710 66 aa8.3□□□□□ -1.08
CD44-201ENST00000263398 RPL32P62910 135 aaKnown RBP8.3□□□□□ -1.08
CD44-201ENST00000263398 ADORA2A-AS1P86434 159 aa8.3□□□□□ -1.08
CD44-201ENST00000263398 CDK2AP2O75956 126 aa8.29□□□□□ -1.08
CD44-201ENST00000263398 ANKRD29Q8N6D5 301 aa8.29□□□□□ -1.08
CD44-201ENST00000263398 TTTY13Q9BZ97 58 aa8.29□□□□□ -1.08
CD44-201ENST00000263398 A4D1N5 150 aa8.29□□□□□ -1.08
CD44-201ENST00000263398 SH2D6Q7Z4S9 175 aa8.29□□□□□ -1.08
CD44-201ENST00000263398 PRO3102Q9H379 93 aa8.29□□□□□ -1.08
CD44-201ENST00000263398 SLURP1P55000 103 aa8.29□□□□□ -1.08
CD44-201ENST00000263398 C15orf53Q8NAA6 179 aa8.29□□□□□ -1.08
CD44-201ENST00000263398 TRIOO75962 3097 aa8.29□□□□□ -1.08
CD44-201ENST00000263398 A0A096LPF7 62 aa8.29□□□□□ -1.08
CD44-201ENST00000263398 A0A1B0GXF2 115 aa8.29□□□□□ -1.08
CD44-201ENST00000263398 ZFP36P26651 326 aaKnown RBP8.29□□□□□ -1.08
CD44-201ENST00000263398 TIMM17AQ99595 171 aa8.28□□□□□ -1.08
CD44-201ENST00000263398 C2orf70A6NJV1 201 aa8.28□□□□□ -1.08
CD44-201ENST00000263398 TAX1BP3O14907 124 aa8.28□□□□□ -1.08
CD44-201ENST00000263398 IGHG2P01859 326 aa8.28□□□□□ -1.08
CD44-201ENST00000263398 XCL1P47992 114 aa8.28□□□□□ -1.08
CD44-201ENST00000263398 GPHB5Q86YW7 130 aa8.28□□□□□ -1.08
CD44-201ENST00000263398 APRG1Q8IVJ8 170 aa8.28□□□□□ -1.08
CD44-201ENST00000263398 E9PLD3 99 aa8.28□□□□□ -1.08
CD44-201ENST00000263398 Q8N1Y9 231 aa8.28□□□□□ -1.08
CD44-201ENST00000263398 TMEM126AQ9H061 195 aa8.28□□□□□ -1.08
CD44-201ENST00000263398 ALPK3Q96L96 1907 aa8.28□□□□□ -1.08
CD44-201ENST00000263398 MUC22E2RYF6 1773 aaPredicted RBP8.28□□□□□ -1.08
CD44-201ENST00000263398 IGLV2-8P01709 118 aa8.27□□□□□ -1.08
CD44-201ENST00000263398 ODF1Q14990 250 aa8.27□□□□□ -1.08
CD44-201ENST00000263398 SPATA12Q7Z6I5 190 aa8.27□□□□□ -1.08
CD44-201ENST00000263398 DSCR8Q96T75 97 aa8.27□□□□□ -1.08
CD44-201ENST00000263398 BAALC-AS2P0C853 105 aa8.27□□□□□ -1.09
CD44-201ENST00000263398 DAZAP2Q15038 168 aaPredicted RBP8.27□□□□□ -1.09
CD44-201ENST00000263398 CLPSL2Q6UWE3 100 aa8.27□□□□□ -1.09
CD44-201ENST00000263398 SIRPDQ9H106 197 aa8.27□□□□□ -1.09
CD44-201ENST00000263398 SPTBN4Q9H254 2564 aa8.27□□□□□ -1.09
CD44-201ENST00000263398 J3QKU1 62 aa8.27□□□□□ -1.09
CD44-201ENST00000263398 RPL39P62891 51 aaKnown RBP8.27□□□□□ -1.09
CD44-201ENST00000263398 C5orf38Q86SI9 138 aa8.27□□□□□ -1.09
CD44-201ENST00000263398 MUSTN1Q8IVN3 82 aa8.27□□□□□ -1.09
CD44-201ENST00000263398 TOMM6Q96B49 74 aa8.27□□□□□ -1.09
CD44-201ENST00000263398 DSCAML1Q8TD84 2053 aa8.26□□□□□ -1.09
CD44-201ENST00000263398 BAALCQ8WXS3 180 aa8.26□□□□□ -1.09
CD44-201ENST00000263398 CHD8Q9HCK8 2581 aa8.26□□□□□ -1.09
CD44-201ENST00000263398 TINCRA0A1B0GVN0 87 aa8.26□□□□□ -1.09
CD44-201ENST00000263398 CRYBA4P53673 196 aa8.26□□□□□ -1.09
CD44-201ENST00000263398 DAZ2Q13117 558 aaKnown RBP8.26□□□□□ -1.09
CD44-201ENST00000263398 DAZ4Q86SG3 579 aaKnown RBP8.26□□□□□ -1.09
CD44-201ENST00000263398 TEN1Q86WV5 123 aa8.26□□□□□ -1.09
CD44-201ENST00000263398 MLST8Q9BVC4 326 aa8.26□□□□□ -1.09
CD44-201ENST00000263398 DAZ3Q9NR90 486 aaKnown RBP8.26□□□□□ -1.09
CD44-201ENST00000263398 HIVEP3Q5T1R4 2406 aa8.26□□□□□ -1.09
CD44-201ENST00000263398 TRAV25A0A0B4J276 109 aa8.25□□□□□ -1.09
CD44-201ENST00000263398 TMEM89A2RUT3 159 aa8.25□□□□□ -1.09
CD44-201ENST00000263398 DEFB113Q30KQ7 82 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms