RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 TSTD3H0UI37 97 aa17.33■□□□□ 0.37
SCN1B-201ENST00000262631 LINC00612Q8N6U2 182 aa17.33■□□□□ 0.37
SCN1B-201ENST00000262631 EDA2RQ9HAV5 297 aa17.33■□□□□ 0.37
SCN1B-201ENST00000262631 FAM3BP58499 235 aaPredicted RBP17.32■□□□□ 0.36
SCN1B-201ENST00000262631 MSRB1Q9NZV6 116 aa17.32■□□□□ 0.36
SCN1B-201ENST00000262631 NAT8BQ9UHF3 227 aa17.32■□□□□ 0.36
SCN1B-201ENST00000262631 NXPH4O95158 308 aa17.32■□□□□ 0.36
SCN1B-201ENST00000262631 SPANXN1Q5VSR9 72 aa17.32■□□□□ 0.36
SCN1B-201ENST00000262631 CNFNQ9BYD5 112 aa17.32■□□□□ 0.36
SCN1B-201ENST00000262631 C12orf74Q32Q52 190 aa17.31■□□□□ 0.36
SCN1B-201ENST00000262631 OR10D4PQ8NGN7 298 aa17.31■□□□□ 0.36
SCN1B-201ENST00000262631 PTH2Q96A98 100 aa17.31■□□□□ 0.36
SCN1B-201ENST00000262631 JPT2Q9H910 190 aa17.31■□□□□ 0.36
SCN1B-201ENST00000262631 TRBV24-1A0A075B6N3 115 aa17.3■□□□□ 0.36
SCN1B-201ENST00000262631 NTF3P20783 257 aa17.3■□□□□ 0.36
SCN1B-201ENST00000262631 FAM210BQ96KR6 192 aa17.3■□□□□ 0.36
SCN1B-201ENST00000262631 NANOS2P60321 138 aaKnown RBP17.29■□□□□ 0.36
SCN1B-201ENST00000262631 C11orf45Q8TAV5 145 aa17.29■□□□□ 0.36
SCN1B-201ENST00000262631 IGHV4-4A0A075B6R2 117 aa17.29■□□□□ 0.36
SCN1B-201ENST00000262631 DAD1P61803 113 aa17.29■□□□□ 0.36
SCN1B-201ENST00000262631 POM121L12Q8N7R1 296 aa17.29■□□□□ 0.36
SCN1B-201ENST00000262631 SYT8Q8NBV8 401 aa17.29■□□□□ 0.36
SCN1B-201ENST00000262631 TRGV2A0A075B6R0 118 aa17.28■□□□□ 0.36
SCN1B-201ENST00000262631 URGCP-MRPS24S4R325 110 aa17.28■□□□□ 0.36
SCN1B-201ENST00000262631 A0A1B0GUT8 65 aa17.27■□□□□ 0.36
SCN1B-201ENST00000262631 TEX48A0A1B0GUV7 120 aa17.27■□□□□ 0.36
SCN1B-201ENST00000262631 CACNG7P62955 275 aa17.27■□□□□ 0.36
SCN1B-201ENST00000262631 PIK3CD-AS1Q5SR53 167 aa17.27■□□□□ 0.36
SCN1B-201ENST00000262631 IMMP2LQ96T52 175 aa17.27■□□□□ 0.36
SCN1B-201ENST00000262631 TGIF2-C20orf24A0A0A6YYL0 155 aa17.26■□□□□ 0.35
SCN1B-201ENST00000262631 TWIST1Q15672 202 aa17.26■□□□□ 0.35
SCN1B-201ENST00000262631 WDR73Q6P4I2 378 aa17.26■□□□□ 0.35
SCN1B-201ENST00000262631 C14orf144Q96I85 54 aa17.26■□□□□ 0.35
SCN1B-201ENST00000262631 SAMD10Q9BYL1 202 aa17.26■□□□□ 0.35
SCN1B-201ENST00000262631 IGHV3-53P01767 116 aa17.26■□□□□ 0.35
SCN1B-201ENST00000262631 TRGC2P03986 189 aa17.26■□□□□ 0.35
SCN1B-201ENST00000262631 DDTP30046 118 aa17.26■□□□□ 0.35
SCN1B-201ENST00000262631 RAB4BP61018 213 aa17.26■□□□□ 0.35
SCN1B-201ENST00000262631 Q6ZTC4 211 aa17.26■□□□□ 0.35
SCN1B-201ENST00000262631 TRGC1P0CF51 173 aa17.25■□□□□ 0.35
SCN1B-201ENST00000262631 CFAP126Q5VTH2 177 aa17.25■□□□□ 0.35
SCN1B-201ENST00000262631 C18orf15Q96N68 181 aa17.25■□□□□ 0.35
SCN1B-201ENST00000262631 BORCS7Q96B45 105 aa17.24■□□□□ 0.35
SCN1B-201ENST00000262631 ZNF479Q96JC4 524 aa17.24■□□□□ 0.35
SCN1B-201ENST00000262631 NDUFAF3Q9BU61 184 aa17.24■□□□□ 0.35
SCN1B-201ENST00000262631 A0A087WWL8 130 aa17.23■□□□□ 0.35
SCN1B-201ENST00000262631 MRPL54Q6P161 138 aaKnown RBP17.23■□□□□ 0.35
SCN1B-201ENST00000262631 RS1O15537 224 aa17.23■□□□□ 0.35
SCN1B-201ENST00000262631 KCNIP4Q6PIL6 250 aa17.23■□□□□ 0.35
SCN1B-201ENST00000262631 PACRGQ96M98 296 aaPredicted RBP17.23■□□□□ 0.35
SCN1B-201ENST00000262631 IGHV3-73A0A0B4J1V6 119 aa17.22■□□□□ 0.35
SCN1B-201ENST00000262631 TRAV4A0A0B4J268 109 aa17.22■□□□□ 0.35
SCN1B-201ENST00000262631 A8MWV9 139 aa17.22■□□□□ 0.35
SCN1B-201ENST00000262631 CRYGDP07320 174 aa17.22■□□□□ 0.35
SCN1B-201ENST00000262631 EVI2AP22794 236 aa17.22■□□□□ 0.35
SCN1B-201ENST00000262631 COA6Q5JTJ3 125 aaKnown RBP17.22■□□□□ 0.35
SCN1B-201ENST00000262631 C14orf178Q8N769 122 aaPredicted RBP17.22■□□□□ 0.35
SCN1B-201ENST00000262631 OR4C5Q8NGB2 326 aa17.22■□□□□ 0.35
SCN1B-201ENST00000262631 FRZBQ92765 325 aa17.22■□□□□ 0.35
SCN1B-201ENST00000262631 C2orf88Q9BSF0 95 aa17.22■□□□□ 0.35
SCN1B-201ENST00000262631 PHOX2AO14813 284 aa17.21■□□□□ 0.35
SCN1B-201ENST00000262631 AP1S3Q96PC3 154 aa17.21■□□□□ 0.35
SCN1B-201ENST00000262631 A0A1B0GXF2 115 aa17.2■□□□□ 0.34
SCN1B-201ENST00000262631 FABP4P15090 132 aa17.2■□□□□ 0.34
SCN1B-201ENST00000262631 RIGQ13278 110 aa17.2■□□□□ 0.34
SCN1B-201ENST00000262631 JOSD1Q15040 202 aaPredicted RBP17.2■□□□□ 0.34
SCN1B-201ENST00000262631 FAM74A4Q5TZK3 123 aa17.2■□□□□ 0.34
SCN1B-201ENST00000262631 UFSP1Q6NVU6 142 aa17.2■□□□□ 0.34
SCN1B-201ENST00000262631 BTF3L4Q96K17 158 aa17.2■□□□□ 0.34
SCN1B-201ENST00000262631 KIF25-AS1Q9Y6Z4 181 aa17.2■□□□□ 0.34
SCN1B-201ENST00000262631 CAMPP49913 170 aa17.2■□□□□ 0.34
SCN1B-201ENST00000262631 HIST1H2BLQ99880 126 aa17.2■□□□□ 0.34
SCN1B-201ENST00000262631 DNAH7Q8WXX0 4024 aa17.19■□□□□ 0.34
SCN1B-201ENST00000262631 ATP5G1P05496 136 aa17.19■□□□□ 0.34
SCN1B-201ENST00000262631 HTN3P15516 51 aa17.19■□□□□ 0.34
SCN1B-201ENST00000262631 NACAE9PAV3 2078 aa17.18■□□□□ 0.34
SCN1B-201ENST00000262631 LINC00315P59091 139 aa17.17■□□□□ 0.34
SCN1B-201ENST00000262631 HBBP68871 147 aa17.17■□□□□ 0.34
SCN1B-201ENST00000262631 CDPF1Q6NVV7 123 aa17.17■□□□□ 0.34
SCN1B-201ENST00000262631 ATP5L2Q7Z4Y8 100 aa17.17■□□□□ 0.34
SCN1B-201ENST00000262631 FHL2Q14192 279 aa17.16■□□□□ 0.34
SCN1B-201ENST00000262631 TRAV9-1A0A075B6T8 112 aa17.16■□□□□ 0.34
SCN1B-201ENST00000262631 Q6ZSN1 163 aa17.16■□□□□ 0.34
SCN1B-201ENST00000262631 ZFP2Q6ZN57 461 aa17.15■□□□□ 0.34
SCN1B-201ENST00000262631 F5H768 121 aa17.14■□□□□ 0.33
SCN1B-201ENST00000262631 SMIM17P0DL12 118 aa17.14■□□□□ 0.33
SCN1B-201ENST00000262631 TMEM191AQ9H0A3 160 aa17.14■□□□□ 0.33
SCN1B-201ENST00000262631 CSMD3Q7Z407 3707 aa17.14■□□□□ 0.33
SCN1B-201ENST00000262631 DEFB131BA0A096LNP1 70 aa17.13■□□□□ 0.33
SCN1B-201ENST00000262631 A0A1B0GW15 77 aa17.13■□□□□ 0.33
SCN1B-201ENST00000262631 DPH3P1Q9H4G8 78 aa17.13■□□□□ 0.33
SCN1B-201ENST00000262631 TRGV4A0A0C4DH28 118 aa17.13■□□□□ 0.33
SCN1B-201ENST00000262631 RHODO00212 210 aa17.13■□□□□ 0.33
SCN1B-201ENST00000262631 PDZD11Q5EBL8 140 aa17.13■□□□□ 0.33
SCN1B-201ENST00000262631 PHLDA1Q8WV24 401 aaPredicted RBP17.13■□□□□ 0.33
SCN1B-201ENST00000262631 A0A1B0GV90 55 aa17.12■□□□□ 0.33
SCN1B-201ENST00000262631 MGPP08493 103 aa17.12■□□□□ 0.33
SCN1B-201ENST00000262631 SMIM15Q7Z3B0 74 aa17.12■□□□□ 0.33
SCN1B-201ENST00000262631 AMN1Q8IY45 258 aa17.12■□□□□ 0.33
SCN1B-201ENST00000262631 TRAV10A0A0B4J240 114 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms