RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 CRYGBP07316 175 aa12.17□□□□□ -0.46
PRPF40B-201ENST00000261897 PMVKQ15126 192 aa12.17□□□□□ -0.46
PRPF40B-201ENST00000261897 PRR9Q5T870 116 aa12.17□□□□□ -0.46
PRPF40B-201ENST00000261897 RPL32P62910 135 aaKnown RBP12.16□□□□□ -0.46
PRPF40B-201ENST00000261897 ATXN8Q156A1 80 aa12.16□□□□□ -0.46
PRPF40B-201ENST00000261897 PRR30Q53SZ7 412 aaPredicted RBP12.16□□□□□ -0.46
PRPF40B-201ENST00000261897 DEFB123Q8N688 67 aa12.16□□□□□ -0.46
PRPF40B-201ENST00000261897 NEXN-AS1Q8NBZ9 246 aa12.16□□□□□ -0.46
PRPF40B-201ENST00000261897 TRAV12-2A0A075B6T6 113 aa12.16□□□□□ -0.46
PRPF40B-201ENST00000261897 BUB3O43684 328 aa12.16□□□□□ -0.46
PRPF40B-201ENST00000261897 Q6ZSV7 163 aa12.16□□□□□ -0.46
PRPF40B-201ENST00000261897 VMO1Q7Z5L0 202 aa12.16□□□□□ -0.46
PRPF40B-201ENST00000261897 COLQQ9Y215 455 aaPredicted RBP12.16□□□□□ -0.46
PRPF40B-201ENST00000261897 A0A0J9YXV3 536 aa12.15□□□□□ -0.46
PRPF40B-201ENST00000261897 FAM57AQ8TBR7 257 aa12.15□□□□□ -0.46
PRPF40B-201ENST00000261897 DUX5Q96PT3 197 aa12.15□□□□□ -0.46
PRPF40B-201ENST00000261897 CHD8Q9HCK8 2581 aa12.15□□□□□ -0.47
PRPF40B-201ENST00000261897 THBDP07204 575 aa12.15□□□□□ -0.47
PRPF40B-201ENST00000261897 TSPEAR-AS2P59090 65 aa12.15□□□□□ -0.47
PRPF40B-201ENST00000261897 LINC01620Q4KN68 170 aa12.15□□□□□ -0.47
PRPF40B-201ENST00000261897 CFAP161Q6P656 301 aa12.15□□□□□ -0.47
PRPF40B-201ENST00000261897 NUP37Q8NFH4 326 aa12.15□□□□□ -0.47
PRPF40B-201ENST00000261897 TOMM6Q96B49 74 aa12.15□□□□□ -0.47
PRPF40B-201ENST00000261897 ZNF580Q9UK33 172 aa12.15□□□□□ -0.47
PRPF40B-201ENST00000261897 ACACBO00763 2458 aa12.14□□□□□ -0.47
PRPF40B-201ENST00000261897 KNCNA6PVL3 124 aa12.14□□□□□ -0.47
PRPF40B-201ENST00000261897 ZNF876PQ49A33 203 aa12.14□□□□□ -0.47
PRPF40B-201ENST00000261897 EEF1AKMT3Q96AZ1 226 aa12.14□□□□□ -0.47
PRPF40B-201ENST00000261897 IGHG4P01861 327 aa12.13□□□□□ -0.47
PRPF40B-201ENST00000261897 GRNP28799 593 aaKnown RBP12.13□□□□□ -0.47
PRPF40B-201ENST00000261897 ATP6V0E2Q8NHE4 81 aa12.13□□□□□ -0.47
PRPF40B-201ENST00000261897 COL12A1Q99715 3063 aa12.13□□□□□ -0.47
PRPF40B-201ENST00000261897 IGLV2-18A0A075B6J9 118 aa12.13□□□□□ -0.47
PRPF40B-201ENST00000261897 DGAT2L7PQ6IED9 249 aa12.13□□□□□ -0.47
PRPF40B-201ENST00000261897 IGHV7-4-1A0A0J9YVY3 117 aa12.13□□□□□ -0.47
PRPF40B-201ENST00000261897 M0R2P5 195 aa12.13□□□□□ -0.47
PRPF40B-201ENST00000261897 CEMP1Q6PRD7 247 aaPredicted RBP12.13□□□□□ -0.47
PRPF40B-201ENST00000261897 PRRC2AP48634 2157 aaKnown RBP12.12□□□□□ -0.47
PRPF40B-201ENST00000261897 A8MZ25 164 aa12.12□□□□□ -0.47
PRPF40B-201ENST00000261897 B9A039 149 aa12.12□□□□□ -0.47
PRPF40B-201ENST00000261897 KLK9Q9UKQ9 250 aa12.12□□□□□ -0.47
PRPF40B-201ENST00000261897 CD28P10747 220 aa12.12□□□□□ -0.47
PRPF40B-201ENST00000261897 RELNP78509 3460 aa12.12□□□□□ -0.47
PRPF40B-201ENST00000261897 JMJD1CQ15652 2540 aa12.11□□□□□ -0.47
PRPF40B-201ENST00000261897 FAM236AA0A1B0GUQ0 79 aa12.11□□□□□ -0.47
PRPF40B-201ENST00000261897 FAM236BA0A1B0GV22 79 aa12.11□□□□□ -0.47
PRPF40B-201ENST00000261897 PAPPA-AS1Q5QFB9 102 aa12.11□□□□□ -0.47
PRPF40B-201ENST00000261897 C9orf153Q5TBE3 101 aa12.11□□□□□ -0.47
PRPF40B-201ENST00000261897 FN1P02751 2386 aaKnown RBP12.11□□□□□ -0.47
PRPF40B-201ENST00000261897 TRAV12-1A0A0B4J245 112 aa12.11□□□□□ -0.47
PRPF40B-201ENST00000261897 ELANEP08246 267 aa12.11□□□□□ -0.47
PRPF40B-201ENST00000261897 PIFOQ8TCI5 191 aa12.11□□□□□ -0.47
PRPF40B-201ENST00000261897 MSRB2Q9Y3D2 182 aa12.11□□□□□ -0.47
PRPF40B-201ENST00000261897 MUC6Q6W4X9 2439 aa12.1□□□□□ -0.47
PRPF40B-201ENST00000261897 IGHV7-81A0A0B4J1V7 117 aa12.1□□□□□ -0.47
PRPF40B-201ENST00000261897 VCYO14598 125 aa12.1□□□□□ -0.47
PRPF40B-201ENST00000261897 UBE2D1P51668 147 aa12.1□□□□□ -0.47
PRPF40B-201ENST00000261897 CUBNO60494 3623 aa12.1□□□□□ -0.47
PRPF40B-201ENST00000261897 IGKV3OR2-268A0A0C4DH90 116 aa12.1□□□□□ -0.47
PRPF40B-201ENST00000261897 F8W735 103 aaPredicted RBP12.09□□□□□ -0.47
PRPF40B-201ENST00000261897 EDA2RQ9HAV5 297 aa12.09□□□□□ -0.47
PRPF40B-201ENST00000261897 CCDC168Q8NDH2 2452 aa12.09□□□□□ -0.47
PRPF40B-201ENST00000261897 BRD3OSQ6XYD6 125 aa12.09□□□□□ -0.47
PRPF40B-201ENST00000261897 CENPEQ02224 2701 aa12.08□□□□□ -0.47
PRPF40B-201ENST00000261897 IGHV3-30P01768 117 aa12.08□□□□□ -0.48
PRPF40B-201ENST00000261897 IGHV3-30-5P0DP03 117 aa12.08□□□□□ -0.48
PRPF40B-201ENST00000261897 POLQO75417 2590 aa12.08□□□□□ -0.48
PRPF40B-201ENST00000261897 CCL21O00585 134 aa12.07□□□□□ -0.48
PRPF40B-201ENST00000261897 ZNF883P0CG24 379 aa12.07□□□□□ -0.48
PRPF40B-201ENST00000261897 TIMM21Q9BVV7 248 aa12.07□□□□□ -0.48
PRPF40B-201ENST00000261897 KAAG1Q9UBP8 84 aa12.07□□□□□ -0.48
PRPF40B-201ENST00000261897 TRBV12-3P01733 135 aa12.07□□□□□ -0.48
PRPF40B-201ENST00000261897 UBE2D3P61077 147 aa12.07□□□□□ -0.48
PRPF40B-201ENST00000261897 UBE2D2P62837 147 aa12.07□□□□□ -0.48
PRPF40B-201ENST00000261897 SUMO4Q6EEV6 95 aa12.07□□□□□ -0.48
PRPF40B-201ENST00000261897 ZNRF2Q8NHG8 242 aa12.07□□□□□ -0.48
PRPF40B-201ENST00000261897 RHODO00212 210 aa12.07□□□□□ -0.48
PRPF40B-201ENST00000261897 IGHV3-33P01772 117 aa12.07□□□□□ -0.48
PRPF40B-201ENST00000261897 UBE2E1P51965 193 aa12.07□□□□□ -0.48
PRPF40B-201ENST00000261897 C20orf173Q96LM9 149 aa12.07□□□□□ -0.48
PRPF40B-201ENST00000261897 IGHV3-38A0A0C4DH36 116 aa12.06□□□□□ -0.48
PRPF40B-201ENST00000261897 TRIAP1O43715 76 aa12.06□□□□□ -0.48
PRPF40B-201ENST00000261897 RNF5Q99942 180 aa12.06□□□□□ -0.48
PRPF40B-201ENST00000261897 UNQ9165/PRO28630Q6UXU0 137 aa12.06□□□□□ -0.48
PRPF40B-201ENST00000261897 C8orf31Q8N9H6 132 aa12.06□□□□□ -0.48
PRPF40B-201ENST00000261897 TRGV11A0A075B6L2 103 aa12.06□□□□□ -0.48
PRPF40B-201ENST00000261897 ID1P41134 155 aa12.06□□□□□ -0.48
PRPF40B-201ENST00000261897 SLC25A29Q8N8R3 303 aa12.06□□□□□ -0.48
PRPF40B-201ENST00000261897 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.05□□□□□ -0.48
PRPF40B-201ENST00000261897 TRAV41A0A0B4J266 112 aa12.05□□□□□ -0.48
PRPF40B-201ENST00000261897 SAA4P35542 130 aa12.05□□□□□ -0.48
PRPF40B-201ENST00000261897 NDUFA12Q9UI09 145 aa12.05□□□□□ -0.48
PRPF40B-201ENST00000261897 IGHV3OR16-12A0A075B7B8 117 aa12.04□□□□□ -0.48
PRPF40B-201ENST00000261897 PPP1R17O96001 155 aa12.04□□□□□ -0.48
PRPF40B-201ENST00000261897 ZNF22P17026 224 aaPredicted RBP12.04□□□□□ -0.48
PRPF40B-201ENST00000261897 CNFNQ9BYD5 112 aa12.04□□□□□ -0.48
PRPF40B-201ENST00000261897 AKAP13Q12802 2813 aa12.04□□□□□ -0.48
PRPF40B-201ENST00000261897 NHLRC4P0CG21 123 aaPredicted RBP12.03□□□□□ -0.48
PRPF40B-201ENST00000261897 SYNJ2BPP57105 145 aa12.03□□□□□ -0.48
PRPF40B-201ENST00000261897 SPINK13Q1W4C9 94 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms