RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 LAGE3Q14657 143 aa6.44□□□□□ -1.38
CALCOCO2-201ENST00000258947 MRAP2Q96G30 205 aa6.44□□□□□ -1.38
CALCOCO2-201ENST00000258947 MRPL16Q9NX20 251 aaKnown RBP6.44□□□□□ -1.38
CALCOCO2-201ENST00000258947 LAMTOR2Q9Y2Q5 125 aa6.44□□□□□ -1.38
CALCOCO2-201ENST00000258947 TRAV25A0A0B4J276 109 aa6.43□□□□□ -1.38
CALCOCO2-201ENST00000258947 NDUFA7O95182 113 aa6.43□□□□□ -1.38
CALCOCO2-201ENST00000258947 CRLF1O75462 422 aa6.43□□□□□ -1.38
CALCOCO2-201ENST00000258947 RRN3P1Q2M238 152 aa6.43□□□□□ -1.38
CALCOCO2-201ENST00000258947 GOLT1BQ9Y3E0 138 aa6.43□□□□□ -1.38
CALCOCO2-201ENST00000258947 NDUFA11Q86Y39 141 aa6.43□□□□□ -1.38
CALCOCO2-201ENST00000258947 ODF3Q96PU9 254 aa6.43□□□□□ -1.38
CALCOCO2-201ENST00000258947 PPP1R17O96001 155 aa6.42□□□□□ -1.38
CALCOCO2-201ENST00000258947 RIPPLY3P57055 190 aa6.42□□□□□ -1.38
CALCOCO2-201ENST00000258947 Q8N8P6 123 aa6.42□□□□□ -1.38
CALCOCO2-201ENST00000258947 GATD1Q8NB37 220 aa6.42□□□□□ -1.38
CALCOCO2-201ENST00000258947 SCGB3A1Q96QR1 104 aa6.42□□□□□ -1.38
CALCOCO2-201ENST00000258947 ZNF747Q9BV97 191 aa6.42□□□□□ -1.38
CALCOCO2-201ENST00000258947 SMIM2Q9BVW6 85 aa6.42□□□□□ -1.38
CALCOCO2-201ENST00000258947 NMUP48645 174 aa6.42□□□□□ -1.38
CALCOCO2-201ENST00000258947 FHL3Q13643 280 aa6.42□□□□□ -1.38
CALCOCO2-201ENST00000258947 SUMO4Q6EEV6 95 aa6.42□□□□□ -1.38
CALCOCO2-201ENST00000258947 PET117Q6UWS5 81 aa6.42□□□□□ -1.38
CALCOCO2-201ENST00000258947 FAM19A4Q96LR4 140 aa6.42□□□□□ -1.38
CALCOCO2-201ENST00000258947 TRGV2A0A075B6R0 118 aa6.41□□□□□ -1.38
CALCOCO2-201ENST00000258947 TRAV9-2A0A087WT02 112 aa6.41□□□□□ -1.38
CALCOCO2-201ENST00000258947 RBMY1BA6NDE4 496 aaKnown RBP6.41□□□□□ -1.38
CALCOCO2-201ENST00000258947 RBMY1EA6NEQ0 496 aaKnown RBP6.41□□□□□ -1.38
CALCOCO2-201ENST00000258947 RBMY1DP0C7P1 496 aaKnown RBP6.41□□□□□ -1.38
CALCOCO2-201ENST00000258947 DEFB125Q8N687 156 aa6.41□□□□□ -1.38
CALCOCO2-201ENST00000258947 TNFRSF18Q9Y5U5 241 aa6.41□□□□□ -1.38
CALCOCO2-201ENST00000258947 SDHAF1A6NFY7 115 aa6.41□□□□□ -1.38
CALCOCO2-201ENST00000258947 CMC4P56277 68 aaPredicted RBP6.41□□□□□ -1.38
CALCOCO2-201ENST00000258947 AMTNQ6UX39 209 aa6.41□□□□□ -1.38
CALCOCO2-201ENST00000258947 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.41□□□□□ -1.38
CALCOCO2-201ENST00000258947 ORMDL2Q53FV1 153 aa6.41□□□□□ -1.38
CALCOCO2-201ENST00000258947 C3orf56Q8N813 242 aa6.41□□□□□ -1.38
CALCOCO2-201ENST00000258947 U3KQK5 164 aa6.41□□□□□ -1.38
CALCOCO2-201ENST00000258947 TRAV2A0A0B4J234 112 aa6.4□□□□□ -1.38
CALCOCO2-201ENST00000258947 H7C1H1 209 aa6.4□□□□□ -1.38
CALCOCO2-201ENST00000258947 MED14OSP0DP75 135 aa6.4□□□□□ -1.38
CALCOCO2-201ENST00000258947 FOSL1P15407 271 aa6.4□□□□□ -1.38
CALCOCO2-201ENST00000258947 TEX43Q6ZNM6 134 aa6.4□□□□□ -1.38
CALCOCO2-201ENST00000258947 ATP5LO75964 103 aa6.4□□□□□ -1.38
CALCOCO2-201ENST00000258947 RBMY1A1P0DJD3 496 aaKnown RBP6.4□□□□□ -1.38
CALCOCO2-201ENST00000258947 RBMY1CP0DJD4 496 aa6.4□□□□□ -1.38
CALCOCO2-201ENST00000258947 CTAG1AP78358 180 aa6.4□□□□□ -1.38
CALCOCO2-201ENST00000258947 RBMY1FQ15415 496 aaKnown RBP6.4□□□□□ -1.38
CALCOCO2-201ENST00000258947 DNLZQ5SXM8 178 aa6.4□□□□□ -1.38
CALCOCO2-201ENST00000258947 ZNF575Q86XF7 245 aa6.4□□□□□ -1.38
CALCOCO2-201ENST00000258947 RASL10AQ92737 203 aa6.4□□□□□ -1.38
CALCOCO2-201ENST00000258947 UQCR10Q9UDW1 63 aa6.4□□□□□ -1.38
CALCOCO2-201ENST00000258947 ZMAT5Q9UDW3 170 aaKnown RBP6.4□□□□□ -1.38
CALCOCO2-201ENST00000258947 M0R2P5 195 aa6.4□□□□□ -1.39
CALCOCO2-201ENST00000258947 OR4C5Q8NGB2 326 aa6.4□□□□□ -1.39
CALCOCO2-201ENST00000258947 CRXO43186 299 aaPredicted RBP6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 IGHV4-4A0A075B6R2 117 aa6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 IGLL1P15814 213 aa6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 AZU1P20160 251 aa6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 C2orf66Q6UXQ4 117 aa6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 STPG4Q8N801 248 aa6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 PHLDA1Q8WV24 401 aaPredicted RBP6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 NDUFAF3Q9BU61 184 aa6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 C1QTNF4Q9BXJ3 329 aa6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 NOP10Q9NPE3 64 aaKnown RBP6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 MUC4Q99102 2169 aa6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 VCYO14598 125 aa6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 IGLV1-51P01701 117 aa6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 NRACQ8N912 160 aa6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 MIEN1Q9BRT3 115 aa6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 CYSLTR1Q9Y271 337 aa6.39□□□□□ -1.39
CALCOCO2-201ENST00000258947 P0DMU3 169 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 FAM231AP0DMU4 169 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 FAM231CP0DMU5 169 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 SPATA12Q7Z6I5 190 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 DKK2Q9UBU2 259 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 STAB1Q9NY15 2570 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 IGHV3-38A0A0C4DH36 116 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 GAGE12BA1L429 117 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 M0R143 59 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 GAGE7O76087 117 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 GAGE12FP0CL80 117 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 GAGE12GP0CL81 117 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 GAGE12IP0CL82 117 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 DEFB130BP0DP73 79 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 DEFB130AP0DP74 79 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 KRTAP10-3P60369 221 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 LINC00482Q8N8I6 264 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 C20orf78Q9BR46 151 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 SCRT2Q9NQ03 307 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 TP53TG1Q9Y2A0 90 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 A8MWV9 139 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 C9orf66Q5T8R8 295 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 DGAT2L7PQ6IED9 249 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 TRPT1Q86TN4 253 aaKnown RBP6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 C9orf85Q96MD7 179 aa6.38□□□□□ -1.39
CALCOCO2-201ENST00000258947 HINT1P49773 126 aaPredicted RBP6.37□□□□□ -1.39
CALCOCO2-201ENST00000258947 SLC25A34Q6PIV7 304 aa6.37□□□□□ -1.39
CALCOCO2-201ENST00000258947 NBEAL2Q6ZNJ1 2754 aa6.37□□□□□ -1.39
CALCOCO2-201ENST00000258947 COL6A5A8TX70 2615 aa6.37□□□□□ -1.39
CALCOCO2-201ENST00000258947 C20orf144Q9BQM9 153 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms