RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 FER1L6-AS1Q8NA97 138 aa12.85□□□□□ -0.35
UPK3B-201ENST00000257632 NUDT10Q8NFP7 164 aa12.85□□□□□ -0.35
UPK3B-201ENST00000257632 NUDT11Q96G61 164 aa12.85□□□□□ -0.35
UPK3B-201ENST00000257632 SMIM7Q9BQ49 75 aa12.85□□□□□ -0.35
UPK3B-201ENST00000257632 K7EN84 100 aa12.84□□□□□ -0.35
UPK3B-201ENST00000257632 SIVA1O15304 175 aa12.84□□□□□ -0.35
UPK3B-201ENST00000257632 SRP19P09132 144 aaKnown RBP12.84□□□□□ -0.35
UPK3B-201ENST00000257632 C1orf134Q5TEV5 83 aa12.84□□□□□ -0.35
UPK3B-201ENST00000257632 UFSP1Q6NVU6 142 aa12.84□□□□□ -0.35
UPK3B-201ENST00000257632 KRTAP17-1Q9BYP8 105 aa12.84□□□□□ -0.35
UPK3B-201ENST00000257632 ZNF727A8MUV8 499 aa12.83□□□□□ -0.36
UPK3B-201ENST00000257632 CRYGDP07320 174 aa12.83□□□□□ -0.36
UPK3B-201ENST00000257632 RNASE7Q9H1E1 156 aaKnown RBP12.83□□□□□ -0.36
UPK3B-201ENST00000257632 GAGE12JA6NER3 117 aa12.82□□□□□ -0.36
UPK3B-201ENST00000257632 IGLC6P0CF74 106 aa12.82□□□□□ -0.36
UPK3B-201ENST00000257632 GAGE1Q13065 139 aa12.82□□□□□ -0.36
UPK3B-201ENST00000257632 GAGE4Q13068 117 aa12.82□□□□□ -0.36
UPK3B-201ENST00000257632 GAGE5Q13069 117 aa12.82□□□□□ -0.36
UPK3B-201ENST00000257632 GAGE13Q4V321 117 aa12.82□□□□□ -0.36
UPK3B-201ENST00000257632 LINC00336Q6ZUF6 198 aa12.82□□□□□ -0.36
UPK3B-201ENST00000257632 C14orf178Q8N769 122 aaPredicted RBP12.82□□□□□ -0.36
UPK3B-201ENST00000257632 RPP21Q9H633 154 aaKnown RBP12.82□□□□□ -0.36
UPK3B-201ENST00000257632 SMIM17P0DL12 118 aa12.81□□□□□ -0.36
UPK3B-201ENST00000257632 CACNG7P62955 275 aa12.81□□□□□ -0.36
UPK3B-201ENST00000257632 PEA15Q15121 130 aa12.81□□□□□ -0.36
UPK3B-201ENST00000257632 ZNF56Q15929 161 aa12.81□□□□□ -0.36
UPK3B-201ENST00000257632 ATP6V0E2Q8NHE4 81 aa12.81□□□□□ -0.36
UPK3B-201ENST00000257632 AP1S3Q96PC3 154 aa12.81□□□□□ -0.36
UPK3B-201ENST00000257632 LY96Q9Y6Y9 160 aa12.81□□□□□ -0.36
UPK3B-201ENST00000257632 A0A1W2PPQ1 181 aa12.8□□□□□ -0.36
UPK3B-201ENST00000257632 F2Z2F3 143 aa12.8□□□□□ -0.36
UPK3B-201ENST00000257632 RTL8CO15255 209 aa12.8□□□□□ -0.36
UPK3B-201ENST00000257632 GATCO43716 136 aaKnown RBP12.8□□□□□ -0.36
UPK3B-201ENST00000257632 C6orf223Q8N319 242 aa12.8□□□□□ -0.36
UPK3B-201ENST00000257632 TIRAPP58753 221 aa12.79□□□□□ -0.36
UPK3B-201ENST00000257632 ERVFC1-1P60608 527 aa12.79□□□□□ -0.36
UPK3B-201ENST00000257632 PRSS29PA6NIE9 313 aa12.78□□□□□ -0.36
UPK3B-201ENST00000257632 F5H697 171 aa12.78□□□□□ -0.36
UPK3B-201ENST00000257632 RAB4BP61018 213 aa12.78□□□□□ -0.36
UPK3B-201ENST00000257632 RAB14P61106 215 aa12.78□□□□□ -0.36
UPK3B-201ENST00000257632 LYZL1Q6UWQ5 148 aa12.78□□□□□ -0.36
UPK3B-201ENST00000257632 WFDC10BQ8IUB3 73 aa12.78□□□□□ -0.36
UPK3B-201ENST00000257632 GTSF1LQ9H1H1 148 aa12.78□□□□□ -0.36
UPK3B-201ENST00000257632 TRAV8-6A0A0B4J262 113 aa12.77□□□□□ -0.37
UPK3B-201ENST00000257632 FAM74A3Q4VXF1 159 aa12.77□□□□□ -0.37
UPK3B-201ENST00000257632 OR10J3Q5JRS4 329 aa12.77□□□□□ -0.37
UPK3B-201ENST00000257632 FAM231DQ6ZW35 169 aa12.77□□□□□ -0.37
UPK3B-201ENST00000257632 LINC01551Q86U37 167 aa12.77□□□□□ -0.37
UPK3B-201ENST00000257632 KRTAP1-5Q9BYS1 174 aa12.77□□□□□ -0.37
UPK3B-201ENST00000257632 DNAH10Q8IVF4 4471 aa12.77□□□□□ -0.37
UPK3B-201ENST00000257632 TRAV9-2A0A087WT02 112 aa12.76□□□□□ -0.37
UPK3B-201ENST00000257632 TRBV10-1A0A0K0K1A3 114 aa12.76□□□□□ -0.37
UPK3B-201ENST00000257632 TRGC1P0CF51 173 aa12.76□□□□□ -0.37
UPK3B-201ENST00000257632 RPL36AP83881 106 aaKnown RBP12.76□□□□□ -0.37
UPK3B-201ENST00000257632 RPL36ALQ969Q0 106 aaKnown RBP12.76□□□□□ -0.37
UPK3B-201ENST00000257632 SMDT1Q9H4I9 107 aa12.76□□□□□ -0.37
UPK3B-201ENST00000257632 Q9UF83 564 aa12.76□□□□□ -0.37
UPK3B-201ENST00000257632 A8MWL6 223 aa12.75□□□□□ -0.37
UPK3B-201ENST00000257632 MGPP08493 103 aa12.75□□□□□ -0.37
UPK3B-201ENST00000257632 LINC00694P0DN24 101 aa12.75□□□□□ -0.37
UPK3B-201ENST00000257632 EVI2AP22794 236 aa12.75□□□□□ -0.37
UPK3B-201ENST00000257632 CTRLP40313 264 aa12.75□□□□□ -0.37
UPK3B-201ENST00000257632 SRSF3P84103 164 aaKnown RBP12.75□□□□□ -0.37
UPK3B-201ENST00000257632 TMEM241Q24JQ0 296 aa12.75□□□□□ -0.37
UPK3B-201ENST00000257632 LELP1Q5T871 98 aa12.75□□□□□ -0.37
UPK3B-201ENST00000257632 MSRB1Q9NZV6 116 aa12.75□□□□□ -0.37
UPK3B-201ENST00000257632 C9JQL5 133 aa12.74□□□□□ -0.37
UPK3B-201ENST00000257632 NTF3P20783 257 aa12.74□□□□□ -0.37
UPK3B-201ENST00000257632 IGHV3-38A0A0C4DH36 116 aa12.73□□□□□ -0.37
UPK3B-201ENST00000257632 DNAH10OSP0CZ25 163 aa12.73□□□□□ -0.37
UPK3B-201ENST00000257632 TWIST1Q15672 202 aa12.73□□□□□ -0.37
UPK3B-201ENST00000257632 CT83Q5H943 113 aa12.73□□□□□ -0.37
UPK3B-201ENST00000257632 WDR73Q6P4I2 378 aa12.73□□□□□ -0.37
UPK3B-201ENST00000257632 C15orf54Q8N8G6 183 aa12.73□□□□□ -0.37
UPK3B-201ENST00000257632 KIF25-AS1Q9Y6Z4 181 aa12.73□□□□□ -0.37
UPK3B-201ENST00000257632 TRBV7-3A0A075B6L6 115 aa12.72□□□□□ -0.37
UPK3B-201ENST00000257632 BTF3P20290 206 aaKnown RBP12.72□□□□□ -0.37
UPK3B-201ENST00000257632 ADIRFQ15847 76 aa12.72□□□□□ -0.37
UPK3B-201ENST00000257632 OSTCQ9NRP0 149 aa12.72□□□□□ -0.37
UPK3B-201ENST00000257632 NAT8Q9UHE5 227 aa12.72□□□□□ -0.37
UPK3B-201ENST00000257632 HERC2O95714 4834 aa12.71□□□□□ -0.37
UPK3B-201ENST00000257632 A0A087WWC5 75 aa12.71□□□□□ -0.37
UPK3B-201ENST00000257632 K7EP13 123 aa12.71□□□□□ -0.37
UPK3B-201ENST00000257632 LINC00315P59091 139 aa12.71□□□□□ -0.37
UPK3B-201ENST00000257632 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.71□□□□□ -0.37
UPK3B-201ENST00000257632 NEXN-AS1Q8NBZ9 246 aa12.71□□□□□ -0.37
UPK3B-201ENST00000257632 GTSF1Q8WW33 167 aa12.71□□□□□ -0.37
UPK3B-201ENST00000257632 BORCS7Q96B45 105 aa12.71□□□□□ -0.37
UPK3B-201ENST00000257632 PGLYRP4Q96LB8 373 aa12.71□□□□□ -0.37
UPK3B-201ENST00000257632 DPH3P1Q9H4G8 78 aa12.71□□□□□ -0.37
UPK3B-201ENST00000257632 H7C1H1 209 aa12.7□□□□□ -0.38
UPK3B-201ENST00000257632 UBE2D3P61077 147 aa12.7□□□□□ -0.38
UPK3B-201ENST00000257632 RPL23P62829 140 aaKnown RBP12.7□□□□□ -0.38
UPK3B-201ENST00000257632 UBE2D2P62837 147 aa12.7□□□□□ -0.38
UPK3B-201ENST00000257632 SMIM15Q7Z3B0 74 aa12.7□□□□□ -0.38
UPK3B-201ENST00000257632 C10orf126Q8N4M7 172 aa12.7□□□□□ -0.38
UPK3B-201ENST00000257632 OR10G8Q8NGN5 311 aa12.7□□□□□ -0.38
UPK3B-201ENST00000257632 ISOC2Q96AB3 205 aa12.7□□□□□ -0.38
UPK3B-201ENST00000257632 CNFNQ9BYD5 112 aa12.7□□□□□ -0.38
UPK3B-201ENST00000257632 LINC01556Q5JQF7 62 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms