RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 KNCNA6PVL3 124 aa10.19□□□□□ -0.78
VHL-201ENST00000256474 TMEM238C9JI98 176 aa10.19□□□□□ -0.78
VHL-201ENST00000256474 SAMD13Q5VXD3 122 aa10.19□□□□□ -0.78
VHL-201ENST00000256474 FAM223AQ8IWN6 122 aa10.19□□□□□ -0.78
VHL-201ENST00000256474 ANKRD17O75179 2603 aaKnown RBP10.18□□□□□ -0.78
VHL-201ENST00000256474 SCGB1C2P0DMR2 95 aa10.18□□□□□ -0.78
VHL-201ENST00000256474 SYNJ2BPP57105 145 aa10.18□□□□□ -0.78
VHL-201ENST00000256474 RNASE13Q5GAN3 156 aaKnown RBP10.18□□□□□ -0.78
VHL-201ENST00000256474 MRAP2Q96G30 205 aa10.18□□□□□ -0.78
VHL-201ENST00000256474 MXRA5Q9NR99 2828 aa10.18□□□□□ -0.78
VHL-201ENST00000256474 JMJD1CQ15652 2540 aa10.18□□□□□ -0.78
VHL-201ENST00000256474 IGHV4-59P01825 116 aa10.18□□□□□ -0.78
VHL-201ENST00000256474 TSSC4Q9Y5U2 329 aaPredicted RBP10.18□□□□□ -0.78
VHL-201ENST00000256474 MTORP42345 2549 aa10.18□□□□□ -0.78
VHL-201ENST00000256474 ZNF462Q96JM2 2506 aa10.18□□□□□ -0.78
VHL-201ENST00000256474 NDUFA4O00483 81 aa10.18□□□□□ -0.78
VHL-201ENST00000256474 KIR2DL4Q99706 377 aa10.18□□□□□ -0.78
VHL-201ENST00000256474 DAZ1Q9NQZ3 744 aaKnown RBP10.18□□□□□ -0.78
VHL-201ENST00000256474 MDFICQ9P1T7 246 aa10.18□□□□□ -0.78
VHL-201ENST00000256474 AVPP01185 164 aa10.17□□□□□ -0.78
VHL-201ENST00000256474 DUX3Q96PT4 197 aa10.17□□□□□ -0.78
VHL-201ENST00000256474 ZNF469Q96JG9 3925 aaPredicted RBP10.17□□□□□ -0.78
VHL-201ENST00000256474 HOXA3O43365 443 aaPredicted RBP10.17□□□□□ -0.78
VHL-201ENST00000256474 RNASE3P12724 160 aaKnown RBP10.17□□□□□ -0.78
VHL-201ENST00000256474 SDHAF1A6NFY7 115 aa10.17□□□□□ -0.78
VHL-201ENST00000256474 ADARB2-AS1A8MUL3 147 aa10.17□□□□□ -0.78
VHL-201ENST00000256474 G3V4G9 280 aa10.17□□□□□ -0.78
VHL-201ENST00000256474 INSL3P51460 131 aa10.17□□□□□ -0.78
VHL-201ENST00000256474 TMEM190Q8WZ59 177 aa10.17□□□□□ -0.78
VHL-201ENST00000256474 CLUHP3Q96NS8 147 aa10.17□□□□□ -0.78
VHL-201ENST00000256474 ZMAT4Q9H898 229 aa10.17□□□□□ -0.78
VHL-201ENST00000256474 C11orf86A6NJI1 115 aa10.16□□□□□ -0.78
VHL-201ENST00000256474 SUMO4Q6EEV6 95 aa10.16□□□□□ -0.78
VHL-201ENST00000256474 BEX4Q9NWD9 120 aaPredicted RBP10.16□□□□□ -0.78
VHL-201ENST00000256474 LGALS1P09382 135 aaKnown RBP10.16□□□□□ -0.78
VHL-201ENST00000256474 SRSF2Q01130 221 aaKnown RBP10.16□□□□□ -0.78
VHL-201ENST00000256474 DEFB136Q30KP8 78 aa10.16□□□□□ -0.78
VHL-201ENST00000256474 GAGE13Q4V321 117 aa10.16□□□□□ -0.78
VHL-201ENST00000256474 HIVEP2P31629 2446 aa10.15□□□□□ -0.78
VHL-201ENST00000256474 U3KQE9 123 aa10.15□□□□□ -0.78
VHL-201ENST00000256474 PRRC2AP48634 2157 aaKnown RBP10.15□□□□□ -0.78
VHL-201ENST00000256474 MUC4Q99102 2169 aa10.15□□□□□ -0.78
VHL-201ENST00000256474 ID1P41134 155 aa10.15□□□□□ -0.78
VHL-201ENST00000256474 C11orf44Q8N8P7 122 aa10.15□□□□□ -0.78
VHL-201ENST00000256474 PTH2Q96A98 100 aa10.15□□□□□ -0.78
VHL-201ENST00000256474 NF1P21359 2839 aa10.15□□□□□ -0.79
VHL-201ENST00000256474 NPC2P61916 151 aa10.15□□□□□ -0.79
VHL-201ENST00000256474 RAX2Q96IS3 184 aa10.15□□□□□ -0.79
VHL-201ENST00000256474 TOMM6Q96B49 74 aa10.14□□□□□ -0.79
VHL-201ENST00000256474 HIGD1BQ9P298 99 aa10.14□□□□□ -0.79
VHL-201ENST00000256474 DOPEY1Q5JWR5 2465 aa10.14□□□□□ -0.79
VHL-201ENST00000256474 PSMG3-AS1Q96PY0 264 aa10.14□□□□□ -0.79
VHL-201ENST00000256474 Q1RN00 199 aa10.14□□□□□ -0.79
VHL-201ENST00000256474 ZFP2Q6ZN57 461 aa10.14□□□□□ -0.79
VHL-201ENST00000256474 FOXI2Q6ZQN5 318 aa10.14□□□□□ -0.79
VHL-201ENST00000256474 NEXN-AS1Q8NBZ9 246 aa10.14□□□□□ -0.79
VHL-201ENST00000256474 IGHV3OR16-12A0A075B7B8 117 aa10.13□□□□□ -0.79
VHL-201ENST00000256474 MSMBP08118 114 aa10.13□□□□□ -0.79
VHL-201ENST00000256474 MRPL53Q96EL3 112 aaKnown RBP10.13□□□□□ -0.79
VHL-201ENST00000256474 TRAV2A0A0B4J234 112 aa10.12□□□□□ -0.79
VHL-201ENST00000256474 PRSS2P07478 247 aa10.12□□□□□ -0.79
VHL-201ENST00000256474 P0DMU3 169 aa10.12□□□□□ -0.79
VHL-201ENST00000256474 FAM231AP0DMU4 169 aa10.12□□□□□ -0.79
VHL-201ENST00000256474 FAM231CP0DMU5 169 aa10.12□□□□□ -0.79
VHL-201ENST00000256474 HERVK_113P61574 105 aa10.12□□□□□ -0.79
VHL-201ENST00000256474 DEFB112Q30KQ8 113 aa10.12□□□□□ -0.79
VHL-201ENST00000256474 ZNF876PQ49A33 203 aa10.12□□□□□ -0.79
VHL-201ENST00000256474 TM2D2Q9BX73 214 aa10.12□□□□□ -0.79
VHL-201ENST00000256474 USMG5Q96IX5 58 aa10.12□□□□□ -0.79
VHL-201ENST00000256474 FN1P02751 2386 aaKnown RBP10.12□□□□□ -0.79
VHL-201ENST00000256474 NDUFS8O00217 210 aa10.12□□□□□ -0.79
VHL-201ENST00000256474 RRN3P1Q2M238 152 aa10.12□□□□□ -0.79
VHL-201ENST00000256474 CEMP1Q6PRD7 247 aaPredicted RBP10.12□□□□□ -0.79
VHL-201ENST00000256474 Q8N1Y9 231 aa10.12□□□□□ -0.79
VHL-201ENST00000256474 IGHG2P01859 326 aa10.11□□□□□ -0.79
VHL-201ENST00000256474 AZU1P20160 251 aa10.11□□□□□ -0.79
VHL-201ENST00000256474 PHLDA1Q8WV24 401 aaPredicted RBP10.11□□□□□ -0.79
VHL-201ENST00000256474 LGALS3P17931 250 aaKnown RBP10.11□□□□□ -0.79
VHL-201ENST00000256474 J3QR89 54 aa10.11□□□□□ -0.79
VHL-201ENST00000256474 SNRPD3P62318 126 aaKnown RBP10.11□□□□□ -0.79
VHL-201ENST00000256474 C20orf78Q9BR46 151 aa10.11□□□□□ -0.79
VHL-201ENST00000256474 E9PLD3 99 aa10.1□□□□□ -0.79
VHL-201ENST00000256474 CIDEAO60543 219 aa10.1□□□□□ -0.79
VHL-201ENST00000256474 PROK1P58294 105 aa10.1□□□□□ -0.79
VHL-201ENST00000256474 C10orf105Q8TEF2 133 aa10.1□□□□□ -0.79
VHL-201ENST00000256474 SPXQ9BT56 116 aa10.1□□□□□ -0.79
VHL-201ENST00000256474 ACANP16112 2415 aa10.09□□□□□ -0.79
VHL-201ENST00000256474 SOCS3O14543 225 aa10.09□□□□□ -0.79
VHL-201ENST00000256474 VCYO14598 125 aa10.09□□□□□ -0.79
VHL-201ENST00000256474 IGSF10Q6WRI0 2623 aa10.09□□□□□ -0.79
VHL-201ENST00000256474 IGHV3-16A0A0C4DH30 117 aa10.09□□□□□ -0.79
VHL-201ENST00000256474 IGHV3-38A0A0C4DH36 116 aa10.09□□□□□ -0.79
VHL-201ENST00000256474 A0A0U1RRA0 63 aa10.09□□□□□ -0.79
VHL-201ENST00000256474 SPAG8Q99932 426 aaPredicted RBP10.09□□□□□ -0.79
VHL-201ENST00000256474 ZNF580Q9UK33 172 aa10.09□□□□□ -0.79
VHL-201ENST00000256474 A6NDX4 124 aa10.09□□□□□ -0.79
VHL-201ENST00000256474 PMVKQ15126 192 aa10.09□□□□□ -0.79
VHL-201ENST00000256474 LENEPQ9Y5L5 61 aa10.09□□□□□ -0.79
VHL-201ENST00000256474 TEX15Q9BXT5 2789 aa10.09□□□□□ -0.79
VHL-201ENST00000256474 TRBV7-3A0A075B6L6 115 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms