RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 J3QQQ9 107 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 P0DMU3 169 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 FAM231AP0DMU4 169 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 FAM231CP0DMU5 169 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 RNASE4P34096 147 aaKnown RBP3.18□□□□□ -1.9
UBE4A-201ENST00000252108 UBE2BP63146 152 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 ADORA2A-AS1P86434 159 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 Q6Q795 121 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 TNFRSF18Q9Y5U5 241 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 TRBV7-3A0A075B6L6 115 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 A4D1N5 150 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 SDHAF1A6NFY7 115 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 K7ERJ3 54 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 RHODO00212 210 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 CFC1BP0CG36 223 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 CFC1P0CG37 223 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 CRIP2P52943 208 aaPredicted RBP3.18□□□□□ -1.9
UBE4A-201ENST00000252108 NEXN-AS1Q8NBZ9 246 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 FAM186AA6NE01 2351 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 PPIFP30405 207 aaKnown RBP3.18□□□□□ -1.9
UBE4A-201ENST00000252108 HOXD3P31249 432 aaPredicted RBP3.18□□□□□ -1.9
UBE4A-201ENST00000252108 LOXL1Q08397 574 aaPredicted RBP3.18□□□□□ -1.9
UBE4A-201ENST00000252108 OXLD1Q5BKU9 147 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 MEIG1Q5JSS6 88 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 TP53TG1Q9Y2A0 90 aa3.18□□□□□ -1.9
UBE4A-201ENST00000252108 APC2O95996 2303 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 GAGE12JA6NER3 117 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 GAGE7O76087 117 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 GAGE12FP0CL80 117 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 GAGE12GP0CL81 117 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 GAGE12IP0CL82 117 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 INAFM2P0DMQ5 153 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 FXYD7P58549 80 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 GAGE4Q13068 117 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 C2orf82Q6UX34 121 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 LHFPL4Q7Z7J7 247 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 HHLA3Q9XRX5 114 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 A0A096LNJ9 63 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 C9JAW5 83 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 I3L3M4 83 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 IGHV3-23P01764 117 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 PHLDA1Q8WV24 401 aaPredicted RBP3.17□□□□□ -1.9
UBE4A-201ENST00000252108 BAALCQ8WXS3 180 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 TMEM126AQ9H061 195 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 CACNA1AO00555 2505 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 CEP295Q9C0D2 2601 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 TRAV2A0A0B4J234 112 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 BRI3O95415 125 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 IGHV3-11P01762 117 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 EFNA4P52798 201 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 C14orf178Q8N769 122 aaPredicted RBP3.17□□□□□ -1.9
UBE4A-201ENST00000252108 S4R3C0 116 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 MUC6Q6W4X9 2439 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 CD7P09564 240 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 UBE2D1P51668 147 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 CFAP126Q5VTH2 177 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 ANKRD29Q8N6D5 301 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 TIMM21Q9BVV7 248 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 MXRA5Q9NR99 2828 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 ZGRF1Q86YA3 2104 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 IGHV7-81A0A0B4J1V7 117 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 A0A0J9YX75 114 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 K7EMT4 169 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 CCL18P55774 89 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 DAZ1Q9NQZ3 744 aaKnown RBP3.17□□□□□ -1.9
UBE4A-201ENST00000252108 NDUFA12Q9UI09 145 aa3.17□□□□□ -1.9
UBE4A-201ENST00000252108 UTP20O75691 2785 aaKnown RBP3.16□□□□□ -1.9
UBE4A-201ENST00000252108 IGHV4OR15-8A0A075B7B6 117 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 A0A087WW49 117 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 A0A0J9YXY3 114 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 TRBV6-5A0A0K0K1A5 114 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 TRBV10-2A0A0K0K1G8 114 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 CD28P10747 220 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 S100A7L2Q5SY68 101 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 Q6ZUT4 128 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 NDUFA11Q86Y39 141 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 NRACQ8N912 160 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 RASL10AQ92737 203 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 CENPVL3A0A0U1RRI6 287 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 TMEM89A2RUT3 159 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 SH2D6Q7Z4S9 175 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 SLC25A29Q8N8R3 303 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 MDFICQ9P1T7 246 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 TLN1Q9Y490 2541 aaKnown RBP3.16□□□□□ -1.9
UBE4A-201ENST00000252108 CEP250Q9BV73 2442 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 ATP6V0E1O15342 81 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 GRNP28799 593 aaKnown RBP3.16□□□□□ -1.9
UBE4A-201ENST00000252108 FAM74A4Q5TZK3 123 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 URB1O60287 2271 aaKnown RBP3.16□□□□□ -1.9
UBE4A-201ENST00000252108 PLXNB1O43157 2135 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 DEFB113Q30KQ7 82 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 RNF152Q8N8N0 203 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 Q8N9W7 124 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 DNAJC30Q96LL9 226 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 SIRPDQ9H106 197 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 TOMM7Q9P0U1 55 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 IGKV3D-20A0A0C4DH25 116 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 TSPAN13O95857 204 aa3.16□□□□□ -1.9
UBE4A-201ENST00000252108 ZFP36P26651 326 aaKnown RBP3.16□□□□□ -1.9
UBE4A-201ENST00000252108 ZNF80P51504 273 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms