RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 IGHV4-39P01824 125 aa12.74□□□□□ -0.37
SGPP1-201ENST00000247225 HIST2H2BDQ6DRA6 164 aa12.74□□□□□ -0.37
SGPP1-201ENST00000247225 CLUHP3Q96NS8 147 aa12.74□□□□□ -0.37
SGPP1-201ENST00000247225 ITPR1Q14643 2758 aa12.74□□□□□ -0.37
SGPP1-201ENST00000247225 TMEM238LA0A1B0GVL6 79 aa12.73□□□□□ -0.37
SGPP1-201ENST00000247225 SDHAF1A6NFY7 115 aa12.73□□□□□ -0.37
SGPP1-201ENST00000247225 A6NJY4 79 aa12.73□□□□□ -0.37
SGPP1-201ENST00000247225 CIDEAO60543 219 aa12.73□□□□□ -0.37
SGPP1-201ENST00000247225 C9orf139Q6ZV77 190 aa12.73□□□□□ -0.37
SGPP1-201ENST00000247225 C5orf56Q8N8D9 126 aa12.73□□□□□ -0.37
SGPP1-201ENST00000247225 UTP20O75691 2785 aaKnown RBP12.73□□□□□ -0.37
SGPP1-201ENST00000247225 FLNCQ14315 2725 aa12.73□□□□□ -0.37
SGPP1-201ENST00000247225 TSPAN13O95857 204 aa12.73□□□□□ -0.37
SGPP1-201ENST00000247225 MT-ATP8P03928 68 aa12.73□□□□□ -0.37
SGPP1-201ENST00000247225 HERVK_113P61574 105 aa12.73□□□□□ -0.37
SGPP1-201ENST00000247225 PSMG4Q5JS54 123 aa12.73□□□□□ -0.37
SGPP1-201ENST00000247225 KNCNA6PVL3 124 aa12.73□□□□□ -0.37
SGPP1-201ENST00000247225 LGALS3P17931 250 aaKnown RBP12.73□□□□□ -0.37
SGPP1-201ENST00000247225 IGHV4-38-2P0DP08 117 aa12.72□□□□□ -0.37
SGPP1-201ENST00000247225 NFE4Q86UQ8 179 aa12.72□□□□□ -0.37
SGPP1-201ENST00000247225 A0A1B0GV72 72 aa12.72□□□□□ -0.37
SGPP1-201ENST00000247225 A0A0U1RRA0 63 aa12.71□□□□□ -0.37
SGPP1-201ENST00000247225 RNASE3P12724 160 aaKnown RBP12.71□□□□□ -0.37
SGPP1-201ENST00000247225 C10orf99Q6UWK7 81 aa12.71□□□□□ -0.37
SGPP1-201ENST00000247225 ATP6V0BQ99437 205 aa12.71□□□□□ -0.37
SGPP1-201ENST00000247225 MDFICQ9P1T7 246 aa12.71□□□□□ -0.37
SGPP1-201ENST00000247225 ZNF580Q9UK33 172 aa12.71□□□□□ -0.37
SGPP1-201ENST00000247225 OOSP1A8MZH6 123 aa12.71□□□□□ -0.38
SGPP1-201ENST00000247225 SPINK13Q1W4C9 94 aa12.71□□□□□ -0.38
SGPP1-201ENST00000247225 SUMO4Q6EEV6 95 aa12.71□□□□□ -0.38
SGPP1-201ENST00000247225 TRPT1Q86TN4 253 aaKnown RBP12.71□□□□□ -0.38
SGPP1-201ENST00000247225 TSPEAR-AS2P59090 65 aa12.7□□□□□ -0.38
SGPP1-201ENST00000247225 FOXI1Q12951 378 aa12.7□□□□□ -0.38
SGPP1-201ENST00000247225 EBI3Q14213 229 aa12.7□□□□□ -0.38
SGPP1-201ENST00000247225 GPHB5Q86YW7 130 aa12.7□□□□□ -0.38
SGPP1-201ENST00000247225 SPXQ9BT56 116 aa12.7□□□□□ -0.38
SGPP1-201ENST00000247225 MAPK1IP1LQ8NDC0 245 aa12.7□□□□□ -0.38
SGPP1-201ENST00000247225 TCL1BO95988 128 aa12.7□□□□□ -0.38
SGPP1-201ENST00000247225 CEMP1Q6PRD7 247 aaPredicted RBP12.7□□□□□ -0.38
SGPP1-201ENST00000247225 MOB4Q9Y3A3 225 aa12.7□□□□□ -0.38
SGPP1-201ENST00000247225 C9JAW5 83 aa12.69□□□□□ -0.38
SGPP1-201ENST00000247225 C11orf71Q6IPW1 123 aa12.69□□□□□ -0.38
SGPP1-201ENST00000247225 SMCPP49901 116 aaPredicted RBP12.69□□□□□ -0.38
SGPP1-201ENST00000247225 PIFOQ8TCI5 191 aa12.69□□□□□ -0.38
SGPP1-201ENST00000247225 EPG5Q9HCE0 2579 aa12.69□□□□□ -0.38
SGPP1-201ENST00000247225 TRAV26-1A0A087WT03 109 aa12.68□□□□□ -0.38
SGPP1-201ENST00000247225 OVOL1O14753 267 aa12.68□□□□□ -0.38
SGPP1-201ENST00000247225 SRSF2Q01130 221 aaKnown RBP12.68□□□□□ -0.38
SGPP1-201ENST00000247225 TAL2Q16559 108 aa12.68□□□□□ -0.38
SGPP1-201ENST00000247225 LMO4P61968 165 aa12.68□□□□□ -0.38
SGPP1-201ENST00000247225 PSMG3-AS1Q96PY0 264 aa12.68□□□□□ -0.38
SGPP1-201ENST00000247225 CRYGDP07320 174 aa12.68□□□□□ -0.38
SGPP1-201ENST00000247225 TSHBP01222 138 aa12.67□□□□□ -0.38
SGPP1-201ENST00000247225 P0DMU3 169 aa12.67□□□□□ -0.38
SGPP1-201ENST00000247225 FAM231AP0DMU4 169 aa12.67□□□□□ -0.38
SGPP1-201ENST00000247225 FAM231CP0DMU5 169 aa12.67□□□□□ -0.38
SGPP1-201ENST00000247225 AJUBAQ96IF1 538 aa12.67□□□□□ -0.38
SGPP1-201ENST00000247225 GEMIN7Q9H840 131 aaKnown RBP12.67□□□□□ -0.38
SGPP1-201ENST00000247225 PMVKQ15126 192 aa12.67□□□□□ -0.38
SGPP1-201ENST00000247225 TRAV12-1A0A0B4J245 112 aa12.67□□□□□ -0.38
SGPP1-201ENST00000247225 ZNRF2Q8NHG8 242 aa12.67□□□□□ -0.38
SGPP1-201ENST00000247225 FN1P02751 2386 aaKnown RBP12.66□□□□□ -0.38
SGPP1-201ENST00000247225 ABCA2Q9BZC7 2435 aa12.66□□□□□ -0.38
SGPP1-201ENST00000247225 A4D1N5 150 aa12.66□□□□□ -0.38
SGPP1-201ENST00000247225 CRIP2P52943 208 aaPredicted RBP12.66□□□□□ -0.38
SGPP1-201ENST00000247225 PRO0461Q9UI25 63 aa12.66□□□□□ -0.38
SGPP1-201ENST00000247225 A0A0J9YXV3 536 aa12.66□□□□□ -0.38
SGPP1-201ENST00000247225 ZNF876PQ49A33 203 aa12.66□□□□□ -0.38
SGPP1-201ENST00000247225 PRRC2AP48634 2157 aaKnown RBP12.66□□□□□ -0.38
SGPP1-201ENST00000247225 NDUFA11Q86Y39 141 aa12.65□□□□□ -0.38
SGPP1-201ENST00000247225 A0A0J9YY99 117 aa12.65□□□□□ -0.38
SGPP1-201ENST00000247225 A8MWV9 139 aa12.65□□□□□ -0.38
SGPP1-201ENST00000247225 A8MZ25 164 aa12.65□□□□□ -0.38
SGPP1-201ENST00000247225 C19orf84I3L1E1 186 aa12.65□□□□□ -0.38
SGPP1-201ENST00000247225 J3QQQ9 107 aa12.65□□□□□ -0.38
SGPP1-201ENST00000247225 KLRB1Q12918 225 aa12.65□□□□□ -0.38
SGPP1-201ENST00000247225 C1QTNF4Q9BXJ3 329 aa12.65□□□□□ -0.38
SGPP1-201ENST00000247225 IGHV4-61A0A0C4DH41 118 aa12.65□□□□□ -0.38
SGPP1-201ENST00000247225 VCYO14598 125 aa12.65□□□□□ -0.38
SGPP1-201ENST00000247225 CFC1BP0CG36 223 aa12.65□□□□□ -0.38
SGPP1-201ENST00000247225 CFC1P0CG37 223 aa12.65□□□□□ -0.38
SGPP1-201ENST00000247225 TMEM190Q8WZ59 177 aa12.65□□□□□ -0.38
SGPP1-201ENST00000247225 PKD1L2Q7Z442 2459 aa12.64□□□□□ -0.39
SGPP1-201ENST00000247225 LINC01546A6NGU7 62 aa12.64□□□□□ -0.39
SGPP1-201ENST00000247225 XGP55808 180 aa12.64□□□□□ -0.39
SGPP1-201ENST00000247225 PROK1P58294 105 aa12.64□□□□□ -0.39
SGPP1-201ENST00000247225 ITLN2Q8WWU7 325 aaPredicted RBP12.64□□□□□ -0.39
SGPP1-201ENST00000247225 NRGNQ92686 78 aa12.64□□□□□ -0.39
SGPP1-201ENST00000247225 CFAP126Q5VTH2 177 aa12.64□□□□□ -0.39
SGPP1-201ENST00000247225 KHDC1LQ5JSQ8 128 aa12.63□□□□□ -0.39
SGPP1-201ENST00000247225 FHL3Q13643 280 aa12.63□□□□□ -0.39
SGPP1-201ENST00000247225 ANKRD29Q8N6D5 301 aa12.63□□□□□ -0.39
SGPP1-201ENST00000247225 IGLV4-69A0A075B6H9 119 aa12.62□□□□□ -0.39
SGPP1-201ENST00000247225 TRAV8-3A0A0A6YYJ7 113 aa12.62□□□□□ -0.39
SGPP1-201ENST00000247225 IGHV3-38A0A0C4DH36 116 aa12.62□□□□□ -0.39
SGPP1-201ENST00000247225 DUX3Q96PT4 197 aa12.62□□□□□ -0.39
SGPP1-201ENST00000247225 MUSTN1Q8IVN3 82 aa12.62□□□□□ -0.39
SGPP1-201ENST00000247225 DAND5Q8N907 189 aa12.62□□□□□ -0.39
SGPP1-201ENST00000247225 VCX2Q9H322 139 aa12.62□□□□□ -0.39
SGPP1-201ENST00000247225 RNF223E7ERA6 249 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms