RNA–Protein interactions for RNA: ENST00000240100.6

DUSP4-201, Transcript of dual specificity phosphatase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP4, Length 5,537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP4-201ENST00000240100 ANGP03950 147 aaKnown RBP13.2□□□□□ -0.3
DUSP4-201ENST00000240100 TEN1Q86WV5 123 aa13.2□□□□□ -0.3
DUSP4-201ENST00000240100 PIFOQ8TCI5 191 aa13.2□□□□□ -0.3
DUSP4-201ENST00000240100 AKAP6Q13023 2319 aa13.2□□□□□ -0.3
DUSP4-201ENST00000240100 CRYGBP07316 175 aa13.2□□□□□ -0.3
DUSP4-201ENST00000240100 RPL39P62891 51 aaKnown RBP13.2□□□□□ -0.3
DUSP4-201ENST00000240100 DSCR8Q96T75 97 aa13.2□□□□□ -0.3
DUSP4-201ENST00000240100 USF3Q68DE3 2245 aa13.2□□□□□ -0.3
DUSP4-201ENST00000240100 APRG1Q8IVJ8 170 aa13.2□□□□□ -0.3
DUSP4-201ENST00000240100 SPANXCQ9NY87 97 aa13.2□□□□□ -0.3
DUSP4-201ENST00000240100 SPTBN1Q01082 2364 aaKnown RBP13.19□□□□□ -0.3
DUSP4-201ENST00000240100 IGLC6P0CF74 106 aa13.19□□□□□ -0.3
DUSP4-201ENST00000240100 TTTY13Q9BZ97 58 aa13.19□□□□□ -0.3
DUSP4-201ENST00000240100 IGHV4OR15-8A0A075B7B6 117 aa13.19□□□□□ -0.3
DUSP4-201ENST00000240100 A0A087WW49 117 aa13.19□□□□□ -0.3
DUSP4-201ENST00000240100 C10orf142B7Z368 130 aa13.19□□□□□ -0.3
DUSP4-201ENST00000240100 CACNA1BQ00975 2339 aa13.19□□□□□ -0.3
DUSP4-201ENST00000240100 Q8NA96 180 aa13.19□□□□□ -0.3
DUSP4-201ENST00000240100 ORMDL1Q9P0S3 153 aa13.19□□□□□ -0.3
DUSP4-201ENST00000240100 CADP27708 2225 aa13.18□□□□□ -0.3
DUSP4-201ENST00000240100 DEFB113Q30KQ7 82 aa13.18□□□□□ -0.3
DUSP4-201ENST00000240100 ATP6V0E2Q8NHE4 81 aa13.18□□□□□ -0.3
DUSP4-201ENST00000240100 MED13Q9UHV7 2174 aa13.18□□□□□ -0.3
DUSP4-201ENST00000240100 ZNF80P51504 273 aaPredicted RBP13.17□□□□□ -0.3
DUSP4-201ENST00000240100 CCDC140Q96MF4 163 aa13.17□□□□□ -0.3
DUSP4-201ENST00000240100 CDK2AP2O75956 126 aa13.17□□□□□ -0.3
DUSP4-201ENST00000240100 LINC01620Q4KN68 170 aa13.17□□□□□ -0.3
DUSP4-201ENST00000240100 A6NDX4 124 aa13.17□□□□□ -0.3
DUSP4-201ENST00000240100 XCL1P47992 114 aa13.17□□□□□ -0.3
DUSP4-201ENST00000240100 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
DUSP4-201ENST00000240100 H0YGX0 51 aa13.16□□□□□ -0.3
DUSP4-201ENST00000240100 LOXL1Q08397 574 aaPredicted RBP13.16□□□□□ -0.3
DUSP4-201ENST00000240100 RBMY1FQ15415 496 aaKnown RBP13.16□□□□□ -0.3
DUSP4-201ENST00000240100 TRACP01848 142 aa13.16□□□□□ -0.3
DUSP4-201ENST00000240100 WFDC2Q14508 124 aa13.16□□□□□ -0.3
DUSP4-201ENST00000240100 G3V4G9 280 aa13.15□□□□□ -0.3
DUSP4-201ENST00000240100 DEFB121Q5J5C9 76 aa13.15□□□□□ -0.3
DUSP4-201ENST00000240100 DYSFO75923 2080 aa13.15□□□□□ -0.3
DUSP4-201ENST00000240100 RMI2Q96E14 147 aa13.15□□□□□ -0.3
DUSP4-201ENST00000240100 MYCNOSP40205 109 aa13.15□□□□□ -0.3
DUSP4-201ENST00000240100 TP53TG3Q9ULZ0 132 aa13.15□□□□□ -0.3
DUSP4-201ENST00000240100 HAMPP81172 84 aa13.14□□□□□ -0.31
DUSP4-201ENST00000240100 UNQ9165/PRO28630Q6UXU0 137 aa13.14□□□□□ -0.31
DUSP4-201ENST00000240100 C3orf56Q8N813 242 aa13.14□□□□□ -0.31
DUSP4-201ENST00000240100 COX7B2Q8TF08 81 aa13.14□□□□□ -0.31
DUSP4-201ENST00000240100 A0A096LPF7 62 aa13.14□□□□□ -0.31
DUSP4-201ENST00000240100 FOXI1Q12951 378 aa13.14□□□□□ -0.31
DUSP4-201ENST00000240100 A0A0J9YX75 114 aa13.14□□□□□ -0.31
DUSP4-201ENST00000240100 CLPSL2Q6UWE3 100 aa13.14□□□□□ -0.31
DUSP4-201ENST00000240100 ODF3Q96PU9 254 aa13.14□□□□□ -0.31
DUSP4-201ENST00000240100 PCDH15Q96QU1 1955 aa13.14□□□□□ -0.31
DUSP4-201ENST00000240100 TRBV7-3A0A075B6L6 115 aa13.14□□□□□ -0.31
DUSP4-201ENST00000240100 C4orf3Q8WVX3 66 aa13.13□□□□□ -0.31
DUSP4-201ENST00000240100 COL6A6A6NMZ7 2263 aa13.13□□□□□ -0.31
DUSP4-201ENST00000240100 C20orf203Q8NBC4 194 aa13.13□□□□□ -0.31
DUSP4-201ENST00000240100 CRYBA4P53673 196 aa13.13□□□□□ -0.31
DUSP4-201ENST00000240100 TINCRA0A1B0GVN0 87 aa13.13□□□□□ -0.31
DUSP4-201ENST00000240100 SND1-IT1Q9HBX3 110 aa13.13□□□□□ -0.31
DUSP4-201ENST00000240100 U3KQK5 164 aa13.12□□□□□ -0.31
DUSP4-201ENST00000240100 PCNX3Q9H6A9 2034 aa13.12□□□□□ -0.31
DUSP4-201ENST00000240100 LY6LH3BQJ8 138 aa13.12□□□□□ -0.31
DUSP4-201ENST00000240100 IGHV1-58A0A0C4DH39 117 aa13.12□□□□□ -0.31
DUSP4-201ENST00000240100 TRBV12-3P01733 135 aa13.12□□□□□ -0.31
DUSP4-201ENST00000240100 CACNA1HO95180 2353 aa13.11□□□□□ -0.31
DUSP4-201ENST00000240100 TRBV10-2A0A0K0K1G8 114 aa13.11□□□□□ -0.31
DUSP4-201ENST00000240100 VSIG2Q96IQ7 327 aa13.11□□□□□ -0.31
DUSP4-201ENST00000240100 CITED1Q99966 193 aa13.11□□□□□ -0.31
DUSP4-201ENST00000240100 MDFICQ9P1T7 246 aa13.11□□□□□ -0.31
DUSP4-201ENST00000240100 WNK2Q9Y3S1 2297 aa13.11□□□□□ -0.31
DUSP4-201ENST00000240100 C5orf38Q86SI9 138 aa13.1□□□□□ -0.31
DUSP4-201ENST00000240100 TRAV4A0A0B4J268 109 aa13.1□□□□□ -0.31
DUSP4-201ENST00000240100 FREM1Q5H8C1 2179 aa13.1□□□□□ -0.31
DUSP4-201ENST00000240100 EBI3Q14213 229 aa13.1□□□□□ -0.31
DUSP4-201ENST00000240100 H3BT86 120 aa13.1□□□□□ -0.31
DUSP4-201ENST00000240100 C9orf66Q5T8R8 295 aa13.1□□□□□ -0.31
DUSP4-201ENST00000240100 A0A0B4J2C4 111 aa13.09□□□□□ -0.31
DUSP4-201ENST00000240100 TMEM126AQ9H061 195 aa13.09□□□□□ -0.31
DUSP4-201ENST00000240100 GYPEP15421 78 aa13.09□□□□□ -0.31
DUSP4-201ENST00000240100 DEFB1P60022 68 aa13.09□□□□□ -0.31
DUSP4-201ENST00000240100 NDUFA11Q86Y39 141 aa13.09□□□□□ -0.31
DUSP4-201ENST00000240100 PCNX2A6NKB5 2137 aa13.09□□□□□ -0.31
DUSP4-201ENST00000240100 ZGRF1Q86YA3 2104 aa13.09□□□□□ -0.31
DUSP4-201ENST00000240100 Q6ZQT7 251 aa13.09□□□□□ -0.31
DUSP4-201ENST00000240100 A0A0J9YY99 117 aa13.08□□□□□ -0.31
DUSP4-201ENST00000240100 Q71RC1 249 aaPredicted RBP13.08□□□□□ -0.32
DUSP4-201ENST00000240100 IGF1P05019 195 aa13.08□□□□□ -0.32
DUSP4-201ENST00000240100 LMO4P61968 165 aa13.08□□□□□ -0.32
DUSP4-201ENST00000240100 H3BQ85 93 aa13.08□□□□□ -0.32
DUSP4-201ENST00000240100 TNFRSF13BO14836 293 aaPredicted RBP13.07□□□□□ -0.32
DUSP4-201ENST00000240100 COX7A2LO14548 114 aa13.07□□□□□ -0.32
DUSP4-201ENST00000240100 NEXN-AS1Q8NBZ9 246 aa13.07□□□□□ -0.32
DUSP4-201ENST00000240100 LGALS9O00182 355 aa13.07□□□□□ -0.32
DUSP4-201ENST00000240100 C22orf34Q6ZV56 151 aa13.06□□□□□ -0.32
DUSP4-201ENST00000240100 CRIP1P50238 77 aa13.06□□□□□ -0.32
DUSP4-201ENST00000240100 LRP4O75096 1905 aa13.05□□□□□ -0.32
DUSP4-201ENST00000240100 MRPL23Q16540 153 aaKnown RBP13.05□□□□□ -0.32
DUSP4-201ENST00000240100 TECTAO75443 2155 aa13.05□□□□□ -0.32
DUSP4-201ENST00000240100 CHD3Q12873 2000 aaKnown RBP13.05□□□□□ -0.32
DUSP4-201ENST00000240100 ARHGAP21Q5T5U3 1957 aa13.05□□□□□ -0.32
DUSP4-201ENST00000240100 TM2D2Q9BX73 214 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms