RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 NPYP01303 97 aa10.38□□□□□ -0.75
NEK9-201ENST00000238616 PRR20EP86478 221 aa10.38□□□□□ -0.75
NEK9-201ENST00000238616 PRR20CP86479 221 aa10.38□□□□□ -0.75
NEK9-201ENST00000238616 PRR20DP86480 221 aa10.38□□□□□ -0.75
NEK9-201ENST00000238616 PRR20BP86481 221 aa10.38□□□□□ -0.75
NEK9-201ENST00000238616 PRR20AP86496 221 aa10.38□□□□□ -0.75
NEK9-201ENST00000238616 MUSTN1Q8IVN3 82 aa10.38□□□□□ -0.75
NEK9-201ENST00000238616 C2CD3Q4AC94 2353 aa10.38□□□□□ -0.75
NEK9-201ENST00000238616 TMEM61Q8N0U2 210 aa10.37□□□□□ -0.75
NEK9-201ENST00000238616 MPLKIPQ8TAP9 179 aa10.37□□□□□ -0.75
NEK9-201ENST00000238616 ACANP16112 2415 aa10.37□□□□□ -0.75
NEK9-201ENST00000238616 A0A0J9YWU9 116 aa10.37□□□□□ -0.75
NEK9-201ENST00000238616 COX8AP10176 69 aa10.37□□□□□ -0.75
NEK9-201ENST00000238616 K7EP13 123 aa10.37□□□□□ -0.75
NEK9-201ENST00000238616 OPRPNQ99935 248 aaPredicted RBP10.37□□□□□ -0.75
NEK9-201ENST00000238616 PSMB8P28062 276 aa10.36□□□□□ -0.75
NEK9-201ENST00000238616 HERV-K104P63124 156 aa10.36□□□□□ -0.75
NEK9-201ENST00000238616 Q6ZWC4 215 aa10.36□□□□□ -0.75
NEK9-201ENST00000238616 PYY3Q5JQD4 70 aa10.36□□□□□ -0.75
NEK9-201ENST00000238616 IGHV4-30-2A0A087WSY4 118 aa10.36□□□□□ -0.75
NEK9-201ENST00000238616 TRBV6-6A0A0A6YYG2 114 aa10.36□□□□□ -0.75
NEK9-201ENST00000238616 TRBV7-3A0A075B6L6 115 aa10.36□□□□□ -0.75
NEK9-201ENST00000238616 NDUFS6O75380 124 aaKnown RBP10.36□□□□□ -0.75
NEK9-201ENST00000238616 ACACBO00763 2458 aa10.36□□□□□ -0.75
NEK9-201ENST00000238616 NDUFA1O15239 70 aa10.35□□□□□ -0.75
NEK9-201ENST00000238616 WT1-ASQ06250 92 aa10.35□□□□□ -0.75
NEK9-201ENST00000238616 SPANXA1Q9NS26 97 aa10.35□□□□□ -0.75
NEK9-201ENST00000238616 SS18L2Q9UHA2 77 aa10.35□□□□□ -0.75
NEK9-201ENST00000238616 NDUFC2O95298 119 aa10.35□□□□□ -0.75
NEK9-201ENST00000238616 SMAD5-AS1Q9Y6J3 95 aa10.35□□□□□ -0.75
NEK9-201ENST00000238616 ATP5G1P05496 136 aa10.35□□□□□ -0.75
NEK9-201ENST00000238616 SH2D6Q7Z4S9 175 aa10.35□□□□□ -0.75
NEK9-201ENST00000238616 ZNF492Q9P255 531 aa10.34□□□□□ -0.75
NEK9-201ENST00000238616 BLCAPP62952 87 aa10.34□□□□□ -0.75
NEK9-201ENST00000238616 RBAKDNA6NC62 111 aa10.34□□□□□ -0.75
NEK9-201ENST00000238616 CFPP27918 469 aa10.34□□□□□ -0.75
NEK9-201ENST00000238616 NTN5Q8WTR8 489 aaPredicted RBP10.34□□□□□ -0.75
NEK9-201ENST00000238616 FXYD5Q96DB9 178 aa10.34□□□□□ -0.75
NEK9-201ENST00000238616 LYPD6BQ8NI32 183 aa10.34□□□□□ -0.75
NEK9-201ENST00000238616 BRK1Q8WUW1 75 aa10.34□□□□□ -0.75
NEK9-201ENST00000238616 LOXP28300 417 aaPredicted RBP10.33□□□□□ -0.76
NEK9-201ENST00000238616 C12orf74Q32Q52 190 aa10.33□□□□□ -0.76
NEK9-201ENST00000238616 PRSS47A8MTI9 375 aa10.33□□□□□ -0.76
NEK9-201ENST00000238616 FOXI1Q12951 378 aa10.33□□□□□ -0.76
NEK9-201ENST00000238616 HRCT1Q6UXD1 115 aa10.33□□□□□ -0.76
NEK9-201ENST00000238616 C20orf78Q9BR46 151 aa10.33□□□□□ -0.76
NEK9-201ENST00000238616 IGKV2D-26A0A0A0MRZ7 120 aa10.33□□□□□ -0.76
NEK9-201ENST00000238616 A0A087WZ39 114 aa10.33□□□□□ -0.76
NEK9-201ENST00000238616 UBE2D4Q9Y2X8 147 aa10.33□□□□□ -0.76
NEK9-201ENST00000238616 LGALS9BQ3B8N2 356 aa10.32□□□□□ -0.76
NEK9-201ENST00000238616 LGALS9CQ6DKI2 356 aa10.32□□□□□ -0.76
NEK9-201ENST00000238616 FAM110AQ9BQ89 295 aa10.32□□□□□ -0.76
NEK9-201ENST00000238616 GATA1P15976 413 aaPredicted RBP10.32□□□□□ -0.76
NEK9-201ENST00000238616 QRFPP83859 136 aa10.32□□□□□ -0.76
NEK9-201ENST00000238616 B5MCH6 92 aa10.32□□□□□ -0.76
NEK9-201ENST00000238616 Q6ZR03 302 aa10.32□□□□□ -0.76
NEK9-201ENST00000238616 V9GYV3 84 aa10.32□□□□□ -0.76
NEK9-201ENST00000238616 K7ERS5 55 aa10.31□□□□□ -0.76
NEK9-201ENST00000238616 DEFB125Q8N687 156 aa10.31□□□□□ -0.76
NEK9-201ENST00000238616 WI2-2373I1.2A0A1W2PRP0 233 aa10.31□□□□□ -0.76
NEK9-201ENST00000238616 C11orf45Q8TAV5 145 aa10.31□□□□□ -0.76
NEK9-201ENST00000238616 K7EP34 96 aa10.31□□□□□ -0.76
NEK9-201ENST00000238616 WISP1O95388 367 aa10.31□□□□□ -0.76
NEK9-201ENST00000238616 Q0VG73 95 aa10.31□□□□□ -0.76
NEK9-201ENST00000238616 TMEM14CQ9P0S9 112 aa10.31□□□□□ -0.76
NEK9-201ENST00000238616 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.31□□□□□ -0.76
NEK9-201ENST00000238616 IGLL1P15814 213 aa10.31□□□□□ -0.76
NEK9-201ENST00000238616 PCP2Q8IVA1 136 aa10.31□□□□□ -0.76
NEK9-201ENST00000238616 UBE2D1P51668 147 aa10.3□□□□□ -0.76
NEK9-201ENST00000238616 WFDC10BQ8IUB3 73 aa10.3□□□□□ -0.76
NEK9-201ENST00000238616 TRBV12-3P01733 135 aa10.3□□□□□ -0.76
NEK9-201ENST00000238616 IGLC7A0M8Q6 106 aa10.3□□□□□ -0.76
NEK9-201ENST00000238616 FAM236AA0A1B0GUQ0 79 aa10.3□□□□□ -0.76
NEK9-201ENST00000238616 FAM236BA0A1B0GV22 79 aa10.3□□□□□ -0.76
NEK9-201ENST00000238616 DIRC1Q969H9 104 aa10.3□□□□□ -0.76
NEK9-201ENST00000238616 HIGD2AQ9BW72 106 aa10.3□□□□□ -0.76
NEK9-201ENST00000238616 Q8TCH9 128 aa10.3□□□□□ -0.76
NEK9-201ENST00000238616 TRBV10-2A0A0K0K1G8 114 aa10.29□□□□□ -0.76
NEK9-201ENST00000238616 SPAG11BQ08648 103 aa10.29□□□□□ -0.76
NEK9-201ENST00000238616 FN1P02751 2386 aaKnown RBP10.29□□□□□ -0.76
NEK9-201ENST00000238616 IGHV4-61A0A0C4DH41 118 aa10.29□□□□□ -0.76
NEK9-201ENST00000238616 IGKV1-17P01599 117 aa10.29□□□□□ -0.76
NEK9-201ENST00000238616 CFC1BP0CG36 223 aa10.29□□□□□ -0.76
NEK9-201ENST00000238616 CFC1P0CG37 223 aa10.29□□□□□ -0.76
NEK9-201ENST00000238616 RPL39P62891 51 aaKnown RBP10.29□□□□□ -0.76
NEK9-201ENST00000238616 CCL25O15444 150 aa10.29□□□□□ -0.76
NEK9-201ENST00000238616 RITA1Q96K30 269 aa10.29□□□□□ -0.76
NEK9-201ENST00000238616 CSRP3P50461 194 aa10.29□□□□□ -0.76
NEK9-201ENST00000238616 C3orf22Q8N5N4 141 aa10.29□□□□□ -0.76
NEK9-201ENST00000238616 MLST8Q9BVC4 326 aa10.29□□□□□ -0.76
NEK9-201ENST00000238616 NPSP0C0P6 89 aa10.28□□□□□ -0.76
NEK9-201ENST00000238616 FAM231DQ6ZW35 169 aa10.28□□□□□ -0.76
NEK9-201ENST00000238616 M0R2N4 97 aa10.28□□□□□ -0.76
NEK9-201ENST00000238616 IGLC1P0CG04 106 aa10.28□□□□□ -0.76
NEK9-201ENST00000238616 AJUBAQ96IF1 538 aa10.28□□□□□ -0.76
NEK9-201ENST00000238616 USP17L23D6RBM5 183 aa10.28□□□□□ -0.76
NEK9-201ENST00000238616 Q8N1Y9 231 aa10.28□□□□□ -0.76
NEK9-201ENST00000238616 ZNF503-AS2A6NEH8 195 aa10.28□□□□□ -0.76
NEK9-201ENST00000238616 IGKV1D-37A0A075B6S9 117 aa10.27□□□□□ -0.77
NEK9-201ENST00000238616 IGHV4-30-4P0DP06 118 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms