RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 APELAP0DMC3 54 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 DUTP33316 252 aaKnown RBP4.37□□□□□ -1.71
RFX4-201ENST00000229387 MRPL53Q96EL3 112 aaKnown RBP4.37□□□□□ -1.71
RFX4-201ENST00000229387 CCL13Q99616 98 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 RETNQ9HD89 108 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 PLXNB1O43157 2135 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 LOC389332A0A1B0GUA5 103 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 BRWD1-AS2P59051 145 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 FAM216BQ8N7L0 139 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 FOXC2Q99958 501 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 FAM215AQ9Y5M1 114 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 DYSFO75923 2080 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 DCHS2Q6V1P9 2916 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 IGKV1D-17A0A075B6S4 117 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 TRBV30A0A0K0K1B3 111 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 SFTA2Q6UW10 78 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 C2orf82Q6UX34 121 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 Q8IYB0 196 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 S1PR3Q99500 378 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 RAI1Q7Z5J4 1906 aaPredicted RBP4.36□□□□□ -1.71
RFX4-201ENST00000229387 A0A0B4J2C4 111 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 IQCF6A8MYZ5 107 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 PROP1O75360 226 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 IGKV3-15P01624 115 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 IGHV3-33P01772 117 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 ARMS2P0C7Q2 107 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 ZNF22P17026 224 aaPredicted RBP4.36□□□□□ -1.71
RFX4-201ENST00000229387 LINC00482Q8N8I6 264 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 MRPL35Q9NZE8 188 aaKnown RBP4.36□□□□□ -1.71
RFX4-201ENST00000229387 SPG11Q96JI7 2443 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 TRAV41A0A0B4J266 112 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 LYNX1G3V0Z9 82 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 IGHV3-30P01768 117 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 IGHV3-30-5P0DP03 117 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 LYNX1P0DP58 116 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 COX6B1P14854 86 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 COPS9Q8WXC6 57 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 CCL17Q92583 94 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 Q96MF0 132 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 CXXC4Q9H2H0 198 aa4.36□□□□□ -1.71
RFX4-201ENST00000229387 CUBNO60494 3623 aa4.35□□□□□ -1.71
RFX4-201ENST00000229387 H7C423 109 aa4.35□□□□□ -1.71
RFX4-201ENST00000229387 LOXP28300 417 aaPredicted RBP4.35□□□□□ -1.71
RFX4-201ENST00000229387 Q6ZRU5 148 aa4.35□□□□□ -1.71
RFX4-201ENST00000229387 PRSS33Q8NF86 280 aa4.35□□□□□ -1.71
RFX4-201ENST00000229387 LAMTOR3Q9UHA4 124 aa4.35□□□□□ -1.71
RFX4-201ENST00000229387 COL27A1Q8IZC6 1860 aaPredicted RBP4.35□□□□□ -1.71
RFX4-201ENST00000229387 TRBV7-1A0A0A6YYK4 115 aa4.35□□□□□ -1.71
RFX4-201ENST00000229387 LY6HO94772 140 aa4.35□□□□□ -1.71
RFX4-201ENST00000229387 MRPL51Q4U2R6 128 aaKnown RBP4.35□□□□□ -1.71
RFX4-201ENST00000229387 IGFL2Q6UWQ7 119 aa4.35□□□□□ -1.71
RFX4-201ENST00000229387 SMCR5Q8TEV8 140 aa4.35□□□□□ -1.71
RFX4-201ENST00000229387 IGHV3-72A0A0B4J1Y9 119 aa4.34□□□□□ -1.71
RFX4-201ENST00000229387 CCL3L1P16619 93 aa4.34□□□□□ -1.71
RFX4-201ENST00000229387 MLANAQ16655 118 aa4.34□□□□□ -1.71
RFX4-201ENST00000229387 FP248Q71RG6 208 aaPredicted RBP4.34□□□□□ -1.71
RFX4-201ENST00000229387 PRR15Q8IV56 129 aa4.34□□□□□ -1.71
RFX4-201ENST00000229387 TMEM263Q8WUH6 116 aaKnown RBP4.34□□□□□ -1.71
RFX4-201ENST00000229387 DYNLRB1Q9NP97 96 aa4.34□□□□□ -1.71
RFX4-201ENST00000229387 SLC25A15Q9Y619 301 aa4.34□□□□□ -1.71
RFX4-201ENST00000229387 F8VRH5 84 aa4.34□□□□□ -1.71
RFX4-201ENST00000229387 ZNF714Q96N38 554 aa4.34□□□□□ -1.71
RFX4-201ENST00000229387 A0A0U1RQV1 116 aa4.34□□□□□ -1.72
RFX4-201ENST00000229387 FXYD7P58549 80 aa4.34□□□□□ -1.72
RFX4-201ENST00000229387 RNF182Q8N6D2 247 aa4.34□□□□□ -1.72
RFX4-201ENST00000229387 SLC25A29Q8N8R3 303 aa4.34□□□□□ -1.72
RFX4-201ENST00000229387 BRK1Q8WUW1 75 aa4.34□□□□□ -1.72
RFX4-201ENST00000229387 FXYD5Q96DB9 178 aa4.34□□□□□ -1.72
RFX4-201ENST00000229387 PAXXQ9BUH6 204 aa4.34□□□□□ -1.72
RFX4-201ENST00000229387 TRAV26-2A0A0B4J265 109 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 A0A0J9YY99 117 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 WFDC11Q8NEX6 87 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 OTORQ9NRC9 128 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 CELSR1Q9NYQ6 3014 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 NAV3Q8IVL0 2385 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 IGHV3-21A0A0B4J1V1 117 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 ZNF815PA8K554 130 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 IGKV1-16P04430 117 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 GFRALQ6UXV0 394 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 C9orf139Q6ZV77 190 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 H3BTX0 84 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 BUB3O43684 328 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 CKS2P33552 79 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 SYNJ2BPP57105 145 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 SCGB1D4Q6XE38 83 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 LINC01560Q8TB33 94 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 DCANP1Q8TF63 244 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 MALRD1Q5VYJ5 2156 aa4.33□□□□□ -1.72
RFX4-201ENST00000229387 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.32□□□□□ -1.72
RFX4-201ENST00000229387 FSTL3O95633 263 aa4.32□□□□□ -1.72
RFX4-201ENST00000229387 IGHV1-46P01743 117 aa4.32□□□□□ -1.72
RFX4-201ENST00000229387 BSPH1Q075Z2 132 aa4.32□□□□□ -1.72
RFX4-201ENST00000229387 ERCC8Q13216 396 aa4.32□□□□□ -1.72
RFX4-201ENST00000229387 FHL2Q14192 279 aa4.32□□□□□ -1.72
RFX4-201ENST00000229387 LYPD2Q6UXB3 125 aa4.32□□□□□ -1.72
RFX4-201ENST00000229387 KNCNA6PVL3 124 aa4.32□□□□□ -1.72
RFX4-201ENST00000229387 SAA2P0DJI9 122 aaPredicted RBP4.32□□□□□ -1.72
RFX4-201ENST00000229387 HILS1P60008 231 aa4.32□□□□□ -1.72
RFX4-201ENST00000229387 C10orf55Q5SWW7 151 aa4.32□□□□□ -1.72
RFX4-201ENST00000229387 Q86TA4 180 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms