RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CRYGBP07316 175 aa10.66□□□□□ -0.7
HCFC2-201ENST00000229330 HOXD3P31249 432 aaPredicted RBP10.66□□□□□ -0.7
HCFC2-201ENST00000229330 IGFL2Q6UWQ7 119 aa10.66□□□□□ -0.7
HCFC2-201ENST00000229330 C9orf47Q6ZRZ4 202 aa10.66□□□□□ -0.7
HCFC2-201ENST00000229330 MAPKAPK5-AS1Q8N8E1 139 aa10.66□□□□□ -0.7
HCFC2-201ENST00000229330 TEX49A0A1B0GTD5 131 aa10.65□□□□□ -0.7
HCFC2-201ENST00000229330 UQCRQO14949 82 aa10.65□□□□□ -0.7
HCFC2-201ENST00000229330 NDUFC2O95298 119 aa10.65□□□□□ -0.7
HCFC2-201ENST00000229330 DAND5Q8N907 189 aa10.65□□□□□ -0.7
HCFC2-201ENST00000229330 F8WEM9 126 aa10.65□□□□□ -0.7
HCFC2-201ENST00000229330 IGHV1-69P01742 117 aa10.64□□□□□ -0.71
HCFC2-201ENST00000229330 MED14OSP0DP75 135 aa10.64□□□□□ -0.71
HCFC2-201ENST00000229330 C5orf47Q569G3 176 aa10.64□□□□□ -0.71
HCFC2-201ENST00000229330 MED13LQ71F56 2210 aa10.64□□□□□ -0.71
HCFC2-201ENST00000229330 A0A1W2PNU3 283 aaPredicted RBP10.64□□□□□ -0.71
HCFC2-201ENST00000229330 PSMB8P28062 276 aa10.64□□□□□ -0.71
HCFC2-201ENST00000229330 DOPEY2Q9Y3R5 2298 aa10.64□□□□□ -0.71
HCFC2-201ENST00000229330 CFHR3Q02985 330 aa10.64□□□□□ -0.71
HCFC2-201ENST00000229330 MALRD1Q5VYJ5 2156 aa10.64□□□□□ -0.71
HCFC2-201ENST00000229330 IGLC6P0CF74 106 aa10.64□□□□□ -0.71
HCFC2-201ENST00000229330 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.64□□□□□ -0.714e-6■■■■■ 71
HCFC2-201ENST00000229330 DEFB130BP0DP73 79 aa10.63□□□□□ -0.71
HCFC2-201ENST00000229330 DEFB130AP0DP74 79 aa10.63□□□□□ -0.71
HCFC2-201ENST00000229330 IGF2-ASQ6U949 168 aa10.63□□□□□ -0.71
HCFC2-201ENST00000229330 SND1-IT1Q9HBX3 110 aa10.63□□□□□ -0.71
HCFC2-201ENST00000229330 ZNF80P51504 273 aaPredicted RBP10.63□□□□□ -0.71
HCFC2-201ENST00000229330 IGHG2P01859 326 aa10.63□□□□□ -0.71
HCFC2-201ENST00000229330 SP5Q6BEB4 398 aaPredicted RBP10.63□□□□□ -0.71
HCFC2-201ENST00000229330 UFSP1Q6NVU6 142 aa10.63□□□□□ -0.71
HCFC2-201ENST00000229330 U3KQK5 164 aa10.63□□□□□ -0.71
HCFC2-201ENST00000229330 LINC01356Q8N9X3 169 aa10.62□□□□□ -0.71
HCFC2-201ENST00000229330 IGHV7-81A0A0B4J1V7 117 aa10.62□□□□□ -0.71
HCFC2-201ENST00000229330 SPRY4Q9C004 299 aa10.62□□□□□ -0.71
HCFC2-201ENST00000229330 TRAV25A0A0B4J276 109 aa10.62□□□□□ -0.71
HCFC2-201ENST00000229330 C16orf54Q6UWD8 224 aa10.62□□□□□ -0.71
HCFC2-201ENST00000229330 MED13Q9UHV7 2174 aa10.62□□□□□ -0.71
HCFC2-201ENST00000229330 NEXN-AS1Q8NBZ9 246 aa10.62□□□□□ -0.71
HCFC2-201ENST00000229330 IGHV1-58A0A0C4DH39 117 aa10.61□□□□□ -0.71
HCFC2-201ENST00000229330 H3BUA1 57 aa10.61□□□□□ -0.71
HCFC2-201ENST00000229330 MSMBP08118 114 aa10.61□□□□□ -0.71
HCFC2-201ENST00000229330 CFAP126Q5VTH2 177 aa10.61□□□□□ -0.71
HCFC2-201ENST00000229330 C3orf22Q8N5N4 141 aa10.61□□□□□ -0.71
HCFC2-201ENST00000229330 hADV29S1A0JD25 119 aa10.61□□□□□ -0.71
HCFC2-201ENST00000229330 XGP55808 180 aa10.61□□□□□ -0.71
HCFC2-201ENST00000229330 KIAA1549LQ6ZVL6 1849 aa10.6□□□□□ -0.71
HCFC2-201ENST00000229330 IGHV3-30-3P0DP02 117 aa10.6□□□□□ -0.71
HCFC2-201ENST00000229330 DKK4Q9UBT3 224 aa10.6□□□□□ -0.71
HCFC2-201ENST00000229330 RNF223E7ERA6 249 aa10.59□□□□□ -0.71
HCFC2-201ENST00000229330 MYCNOSP40205 109 aa10.59□□□□□ -0.71
HCFC2-201ENST00000229330 NCKAP5O14513 1909 aa10.59□□□□□ -0.71
HCFC2-201ENST00000229330 CREBBPQ92793 2442 aa10.59□□□□□ -0.71
HCFC2-201ENST00000229330 HOXB4P17483 251 aaPredicted RBP10.59□□□□□ -0.71
HCFC2-201ENST00000229330 INSL3P51460 131 aa10.59□□□□□ -0.71
HCFC2-201ENST00000229330 MIAQ16674 131 aa10.59□□□□□ -0.71
HCFC2-201ENST00000229330 PRO3102Q9H379 93 aa10.59□□□□□ -0.71
HCFC2-201ENST00000229330 A0A0J9YY99 117 aa10.59□□□□□ -0.71
HCFC2-201ENST00000229330 NSUN5P1Q3KNT7 163 aa10.59□□□□□ -0.71
HCFC2-201ENST00000229330 A0A0J9YXY3 114 aa10.58□□□□□ -0.72
HCFC2-201ENST00000229330 GRNP28799 593 aaKnown RBP10.58□□□□□ -0.72
HCFC2-201ENST00000229330 LINC01619G3V211 115 aa10.58□□□□□ -0.72
HCFC2-201ENST00000229330 TMEM61Q8N0U2 210 aa10.58□□□□□ -0.72
HCFC2-201ENST00000229330 CGB3P0DN86 165 aa10.58□□□□□ -0.72
HCFC2-201ENST00000229330 CGB7P0DN87 165 aa10.58□□□□□ -0.72
HCFC2-201ENST00000229330 C20orf203Q8NBC4 194 aa10.58□□□□□ -0.72
HCFC2-201ENST00000229330 MAPK1IP1LQ8NDC0 245 aa10.58□□□□□ -0.72
HCFC2-201ENST00000229330 OPRPNQ99935 248 aaPredicted RBP10.58□□□□□ -0.72
HCFC2-201ENST00000229330 U3KQE9 123 aa10.58□□□□□ -0.72
HCFC2-201ENST00000229330 CCDC179H3BU77 68 aa10.58□□□□□ -0.72
HCFC2-201ENST00000229330 P0DMU3 169 aa10.58□□□□□ -0.72
HCFC2-201ENST00000229330 FAM231AP0DMU4 169 aa10.58□□□□□ -0.72
HCFC2-201ENST00000229330 FAM231CP0DMU5 169 aa10.58□□□□□ -0.72
HCFC2-201ENST00000229330 JMJD7-PLA2G4BH0Y9G9 81 aa10.57□□□□□ -0.72
HCFC2-201ENST00000229330 NFE4Q86UQ8 179 aa10.57□□□□□ -0.72
HCFC2-201ENST00000229330 LECT2O14960 151 aa10.57□□□□□ -0.72
HCFC2-201ENST00000229330 IGLV1-47P01700 117 aa10.57□□□□□ -0.72
HCFC2-201ENST00000229330 C1orf229Q6ZS94 237 aaPredicted RBP10.57□□□□□ -0.72
HCFC2-201ENST00000229330 CRIP1P50238 77 aa10.57□□□□□ -0.72
HCFC2-201ENST00000229330 VSIG2Q96IQ7 327 aa10.57□□□□□ -0.72
HCFC2-201ENST00000229330 TRAV4A0A0B4J268 109 aa10.57□□□□□ -0.72
HCFC2-201ENST00000229330 ADAMTS9Q9P2N4 1935 aa10.57□□□□□ -0.72
HCFC2-201ENST00000229330 GATA3P23771 443 aa10.57□□□□□ -0.72
HCFC2-201ENST00000229330 COL4A4P53420 1690 aaPredicted RBP10.56□□□□□ -0.72
HCFC2-201ENST00000229330 ZNF561-AS1K7EIQ3 104 aa10.56□□□□□ -0.72
HCFC2-201ENST00000229330 NOTCH3Q9UM47 2321 aa10.56□□□□□ -0.72
HCFC2-201ENST00000229330 RNF185Q96GF1 192 aa10.55□□□□□ -0.72
HCFC2-201ENST00000229330 PCNX3Q9H6A9 2034 aa10.55□□□□□ -0.72
HCFC2-201ENST00000229330 CENPVL3A0A0U1RRI6 287 aa10.55□□□□□ -0.72
HCFC2-201ENST00000229330 Q8N7P7 452 aa10.55□□□□□ -0.72
HCFC2-201ENST00000229330 COX7B2Q8TF08 81 aa10.55□□□□□ -0.72
HCFC2-201ENST00000229330 MDFICQ9P1T7 246 aa10.55□□□□□ -0.72
HCFC2-201ENST00000229330 FAM208BQ5VWN6 2430 aa10.55□□□□□ -0.72
HCFC2-201ENST00000229330 COX7A2LO14548 114 aa10.55□□□□□ -0.72
HCFC2-201ENST00000229330 IGHV3-33P01772 117 aa10.55□□□□□ -0.72
HCFC2-201ENST00000229330 C5orf38Q86SI9 138 aa10.54□□□□□ -0.72
HCFC2-201ENST00000229330 FANCD2OSQ96PS1 177 aa10.54□□□□□ -0.72
HCFC2-201ENST00000229330 Q9HAA7 133 aa10.54□□□□□ -0.72
HCFC2-201ENST00000229330 PLCE1Q9P212 2302 aa10.54□□□□□ -0.72
HCFC2-201ENST00000229330 TNRC6BQ9UPQ9 1833 aaKnown RBP10.54□□□□□ -0.72
HCFC2-201ENST00000229330 TRBV30A0A0K0K1B3 111 aa10.54□□□□□ -0.72
HCFC2-201ENST00000229330 MRPS12O15235 138 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms