RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 Q8N1Y9 231 aa10.67□□□□□ -0.7
PRKAB1-201ENST00000229328 DYNLRB2Q8TF09 96 aa10.67□□□□□ -0.7
PRKAB1-201ENST00000229328 TMEM158Q8WZ71 300 aa10.67□□□□□ -0.7
PRKAB1-201ENST00000229328 KIF25-AS1Q9Y6Z4 181 aa10.67□□□□□ -0.7
PRKAB1-201ENST00000229328 TMEM238C9JI98 176 aa10.66□□□□□ -0.7
PRKAB1-201ENST00000229328 RBMY1A1P0DJD3 496 aaKnown RBP10.66□□□□□ -0.7
PRKAB1-201ENST00000229328 RBMY1CP0DJD4 496 aa10.66□□□□□ -0.7
PRKAB1-201ENST00000229328 RBMY1FQ15415 496 aaKnown RBP10.66□□□□□ -0.7
PRKAB1-201ENST00000229328 CD300EQ496F6 205 aaPredicted RBP10.66□□□□□ -0.7
PRKAB1-201ENST00000229328 DEFB125Q8N687 156 aa10.66□□□□□ -0.7
PRKAB1-201ENST00000229328 AP1S3Q96PC3 154 aa10.66□□□□□ -0.7
PRKAB1-201ENST00000229328 CITED2Q99967 270 aaPredicted RBP10.66□□□□□ -0.7
PRKAB1-201ENST00000229328 CSTL1Q9H114 145 aa10.66□□□□□ -0.7
PRKAB1-201ENST00000229328 TSPOP30536 169 aa10.66□□□□□ -0.7
PRKAB1-201ENST00000229328 LINC00315P59091 139 aa10.66□□□□□ -0.7
PRKAB1-201ENST00000229328 NIPBLQ6KC79 2804 aaeCLIP10.66□□□□□ -0.75e-6■■■□□ 16.4
PRKAB1-201ENST00000229328 IGHV1OR15-1A0A075B7D0 117 aa10.65□□□□□ -0.7
PRKAB1-201ENST00000229328 RBMY1BA6NDE4 496 aaKnown RBP10.65□□□□□ -0.7
PRKAB1-201ENST00000229328 RBMY1EA6NEQ0 496 aaKnown RBP10.65□□□□□ -0.7
PRKAB1-201ENST00000229328 RBMY1DP0C7P1 496 aaKnown RBP10.65□□□□□ -0.7
PRKAB1-201ENST00000229328 FHL3Q13643 280 aa10.65□□□□□ -0.71
PRKAB1-201ENST00000229328 C9orf85Q96MD7 179 aa10.65□□□□□ -0.71
PRKAB1-201ENST00000229328 ST20Q9HBF5 79 aa10.65□□□□□ -0.71
PRKAB1-201ENST00000229328 WNK1Q9H4A3 2382 aa10.65□□□□□ -0.71
PRKAB1-201ENST00000229328 H3BMM0 161 aa10.64□□□□□ -0.71
PRKAB1-201ENST00000229328 CCL24O00175 119 aa10.64□□□□□ -0.71
PRKAB1-201ENST00000229328 HLA-DRB4P13762 266 aa10.64□□□□□ -0.71
PRKAB1-201ENST00000229328 SMIM2Q9BVW6 85 aa10.64□□□□□ -0.71
PRKAB1-201ENST00000229328 HLA-DRB4X5D2U9 266 aa10.64□□□□□ -0.71
PRKAB1-201ENST00000229328 A0A087WWL8 130 aa10.64□□□□□ -0.71
PRKAB1-201ENST00000229328 HINT1P49773 126 aaPredicted RBP10.64□□□□□ -0.71
PRKAB1-201ENST00000229328 LAGE3Q14657 143 aa10.64□□□□□ -0.71
PRKAB1-201ENST00000229328 LGALS9BQ3B8N2 356 aa10.64□□□□□ -0.71
PRKAB1-201ENST00000229328 LGALS9CQ6DKI2 356 aa10.64□□□□□ -0.71
PRKAB1-201ENST00000229328 MAP6D1Q9H9H5 199 aa10.64□□□□□ -0.71
PRKAB1-201ENST00000229328 TRAV2A0A0B4J234 112 aa10.63□□□□□ -0.71
PRKAB1-201ENST00000229328 TMEM238LA0A1B0GVL6 79 aa10.63□□□□□ -0.71
PRKAB1-201ENST00000229328 SUMO2P61956 95 aaKnown RBP10.63□□□□□ -0.71
PRKAB1-201ENST00000229328 POM121L12Q8N7R1 296 aa10.63□□□□□ -0.71
PRKAB1-201ENST00000229328 C16orf95Q9H693 158 aa10.63□□□□□ -0.71
PRKAB1-201ENST00000229328 OTOGQ6ZRI0 2925 aa10.63□□□□□ -0.71
PRKAB1-201ENST00000229328 DKK2Q9UBU2 259 aa10.63□□□□□ -0.71
PRKAB1-201ENST00000229328 ZNF256Q9Y2P7 627 aaPredicted RBP10.63□□□□□ -0.71
PRKAB1-201ENST00000229328 A8MTW9 85 aa10.62□□□□□ -0.71
PRKAB1-201ENST00000229328 SMIM17P0DL12 118 aa10.62□□□□□ -0.71
PRKAB1-201ENST00000229328 OCIAD2Q56VL3 154 aa10.62□□□□□ -0.71
PRKAB1-201ENST00000229328 PRM2P04554 102 aa10.62□□□□□ -0.71
PRKAB1-201ENST00000229328 CST9LQ9H4G1 147 aa10.62□□□□□ -0.71
PRKAB1-201ENST00000229328 HILS1P60008 231 aa10.61□□□□□ -0.71
PRKAB1-201ENST00000229328 TSSC4Q9Y5U2 329 aaPredicted RBP10.61□□□□□ -0.71
PRKAB1-201ENST00000229328 HTN1P15515 57 aa10.61□□□□□ -0.71
PRKAB1-201ENST00000229328 ZNF418Q8TF45 676 aaPredicted RBP10.61□□□□□ -0.71
PRKAB1-201ENST00000229328 C20orf78Q9BR46 151 aa10.61□□□□□ -0.71
PRKAB1-201ENST00000229328 HIVEP2P31629 2446 aa10.61□□□□□ -0.71
PRKAB1-201ENST00000229328 VAMP3Q15836 100 aa10.6□□□□□ -0.71
PRKAB1-201ENST00000229328 SUMO4Q6EEV6 95 aa10.6□□□□□ -0.71
PRKAB1-201ENST00000229328 SETXQ7Z333 2677 aaKnown RBP10.6□□□□□ -0.71
PRKAB1-201ENST00000229328 TCTAP57738 103 aa10.6□□□□□ -0.71
PRKAB1-201ENST00000229328 FAM74A4Q5TZK3 123 aa10.6□□□□□ -0.71
PRKAB1-201ENST00000229328 NEGR1Q7Z3B1 354 aa10.6□□□□□ -0.71
PRKAB1-201ENST00000229328 LY6G6DO95868 133 aa10.59□□□□□ -0.71
PRKAB1-201ENST00000229328 NUDT3O95989 172 aa10.59□□□□□ -0.71
PRKAB1-201ENST00000229328 SPAG8Q99932 426 aaPredicted RBP10.59□□□□□ -0.71
PRKAB1-201ENST00000229328 MRPS16Q9Y3D3 137 aaKnown RBP10.59□□□□□ -0.71
PRKAB1-201ENST00000229328 PRSS1P07477 247 aa10.59□□□□□ -0.71
PRKAB1-201ENST00000229328 ODF1Q14990 250 aa10.59□□□□□ -0.71
PRKAB1-201ENST00000229328 ODF3L2Q3SX64 289 aa10.59□□□□□ -0.71
PRKAB1-201ENST00000229328 DEFB104AQ8WTQ1 72 aa10.59□□□□□ -0.71
PRKAB1-201ENST00000229328 F5H697 171 aa10.58□□□□□ -0.72
PRKAB1-201ENST00000229328 SCGB2A2Q13296 93 aa10.58□□□□□ -0.72
PRKAB1-201ENST00000229328 SLC25A34Q6PIV7 304 aa10.58□□□□□ -0.72
PRKAB1-201ENST00000229328 TMEM160Q9NX00 188 aa10.58□□□□□ -0.72
PRKAB1-201ENST00000229328 CRYGDP07320 174 aa10.58□□□□□ -0.72
PRKAB1-201ENST00000229328 ZNF876PQ49A33 203 aa10.57□□□□□ -0.72
PRKAB1-201ENST00000229328 SYT8Q8NBV8 401 aa10.57□□□□□ -0.72
PRKAB1-201ENST00000229328 TRGV11A0A075B6L2 103 aa10.57□□□□□ -0.72
PRKAB1-201ENST00000229328 ADARB2-AS1A8MUL3 147 aa10.56□□□□□ -0.72
PRKAB1-201ENST00000229328 ATP5LO75964 103 aa10.56□□□□□ -0.72
PRKAB1-201ENST00000229328 ORMDL2Q53FV1 153 aa10.56□□□□□ -0.72
PRKAB1-201ENST00000229328 ERASQ7Z444 233 aa10.56□□□□□ -0.72
PRKAB1-201ENST00000229328 TRAV25A0A0B4J276 109 aa10.55□□□□□ -0.72
PRKAB1-201ENST00000229328 COX8AP10176 69 aa10.55□□□□□ -0.72
PRKAB1-201ENST00000229328 PROK1P58294 105 aa10.55□□□□□ -0.72
PRKAB1-201ENST00000229328 ZMAT4Q9H898 229 aa10.55□□□□□ -0.72
PRKAB1-201ENST00000229328 PPP1R17O96001 155 aa10.55□□□□□ -0.72
PRKAB1-201ENST00000229328 POLR2KP53803 58 aaKnown RBP10.55□□□□□ -0.72
PRKAB1-201ENST00000229328 ZNF56Q15929 161 aa10.55□□□□□ -0.72
PRKAB1-201ENST00000229328 NSUN5P1Q3KNT7 163 aa10.55□□□□□ -0.72
PRKAB1-201ENST00000229328 MORN3Q6PF18 240 aaPredicted RBP10.55□□□□□ -0.72
PRKAB1-201ENST00000229328 TOMM6Q96B49 74 aa10.55□□□□□ -0.72
PRKAB1-201ENST00000229328 K7ERU9 68 aa10.54□□□□□ -0.72
PRKAB1-201ENST00000229328 HHLA3Q9XRX5 114 aa10.54□□□□□ -0.72
PRKAB1-201ENST00000229328 M0QY20 66 aa10.54□□□□□ -0.72
PRKAB1-201ENST00000229328 NDUFA7O95182 113 aa10.54□□□□□ -0.72
PRKAB1-201ENST00000229328 FGF6P10767 208 aa10.54□□□□□ -0.72
PRKAB1-201ENST00000229328 KRTAP10-3P60369 221 aa10.54□□□□□ -0.72
PRKAB1-201ENST00000229328 MRPL35Q9NZE8 188 aaKnown RBP10.54□□□□□ -0.72
PRKAB1-201ENST00000229328 SAP30O75446 220 aa10.53□□□□□ -0.72
PRKAB1-201ENST00000229328 C2orf66Q6UXQ4 117 aa10.53□□□□□ -0.72
PRKAB1-201ENST00000229328 SCGB3A1Q96QR1 104 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms