RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 IGHV3-33P01772 117 aa13.35□□□□□ -0.27
CDKN1B-201ENST00000228872 PMVKQ15126 192 aa13.35□□□□□ -0.27
CDKN1B-201ENST00000228872 IGIPA6NJ69 53 aa13.35□□□□□ -0.27
CDKN1B-201ENST00000228872 S100A4P26447 101 aaKnown RBP13.35□□□□□ -0.27
CDKN1B-201ENST00000228872 CFAP161Q6P656 301 aa13.35□□□□□ -0.27
CDKN1B-201ENST00000228872 NTN5Q8WTR8 489 aaPredicted RBP13.35□□□□□ -0.27
CDKN1B-201ENST00000228872 TRBV7-9A0A0J9YWB2 115 aa13.34□□□□□ -0.27
CDKN1B-201ENST00000228872 A4D1N5 150 aa13.34□□□□□ -0.27
CDKN1B-201ENST00000228872 IFITM1P13164 125 aa13.34□□□□□ -0.27
CDKN1B-201ENST00000228872 TTC32Q5I0X7 151 aa13.34□□□□□ -0.27
CDKN1B-201ENST00000228872 Q8N1Y9 231 aa13.34□□□□□ -0.27
CDKN1B-201ENST00000228872 PHLDA3Q9Y5J5 127 aa13.34□□□□□ -0.27
CDKN1B-201ENST00000228872 TMEM170BQ5T4T1 132 aa13.34□□□□□ -0.27
CDKN1B-201ENST00000228872 Q6Q795 121 aa13.33□□□□□ -0.28
CDKN1B-201ENST00000228872 TMEM263Q8WUH6 116 aaKnown RBP13.33□□□□□ -0.28
CDKN1B-201ENST00000228872 PPP1R17O96001 155 aa13.33□□□□□ -0.28
CDKN1B-201ENST00000228872 P0DMU3 169 aa13.33□□□□□ -0.28
CDKN1B-201ENST00000228872 FAM231AP0DMU4 169 aa13.33□□□□□ -0.28
CDKN1B-201ENST00000228872 FAM231CP0DMU5 169 aa13.33□□□□□ -0.28
CDKN1B-201ENST00000228872 FAM110DQ8TAY7 271 aaPredicted RBP13.33□□□□□ -0.28
CDKN1B-201ENST00000228872 J3QQQ9 107 aa13.32□□□□□ -0.28
CDKN1B-201ENST00000228872 CLEC19AQ6UXS0 136 aa13.32□□□□□ -0.28
CDKN1B-201ENST00000228872 ZNRF2Q8NHG8 242 aa13.32□□□□□ -0.28
CDKN1B-201ENST00000228872 CCDC140Q96MF4 163 aa13.32□□□□□ -0.28
CDKN1B-201ENST00000228872 METTL26Q96S19 204 aa13.32□□□□□ -0.28
CDKN1B-201ENST00000228872 FAM110AQ9BQ89 295 aa13.32□□□□□ -0.28
CDKN1B-201ENST00000228872 UBTD1Q9HAC8 227 aa13.32□□□□□ -0.28
CDKN1B-201ENST00000228872 LENEPQ9Y5L5 61 aa13.32□□□□□ -0.28
CDKN1B-201ENST00000228872 ZFAND2AQ8N6M9 145 aa13.32□□□□□ -0.28
CDKN1B-201ENST00000228872 H7C2G1 150 aa13.31□□□□□ -0.28
CDKN1B-201ENST00000228872 C16orf92Q96LL3 132 aa13.31□□□□□ -0.28
CDKN1B-201ENST00000228872 C20orf173Q96LM9 149 aa13.31□□□□□ -0.28
CDKN1B-201ENST00000228872 ODF3Q96PU9 254 aa13.31□□□□□ -0.28
CDKN1B-201ENST00000228872 TRAV21A0A0B4J279 112 aa13.31□□□□□ -0.28
CDKN1B-201ENST00000228872 LGALS3P17931 250 aaKnown RBP13.31□□□□□ -0.28
CDKN1B-201ENST00000228872 ARL3P36405 182 aa13.31□□□□□ -0.28
CDKN1B-201ENST00000228872 RPL39P62891 51 aaKnown RBP13.31□□□□□ -0.28
CDKN1B-201ENST00000228872 ECSCRQ19T08 205 aa13.31□□□□□ -0.28
CDKN1B-201ENST00000228872 DEFB104AQ8WTQ1 72 aa13.31□□□□□ -0.28
CDKN1B-201ENST00000228872 TMEM141Q96I45 108 aa13.31□□□□□ -0.28
CDKN1B-201ENST00000228872 LINC01620Q4KN68 170 aa13.3□□□□□ -0.28
CDKN1B-201ENST00000228872 A0A0B4J2C4 111 aa13.3□□□□□ -0.28
CDKN1B-201ENST00000228872 ELANEP08246 267 aa13.3□□□□□ -0.28
CDKN1B-201ENST00000228872 EBI3Q14213 229 aa13.3□□□□□ -0.28
CDKN1B-201ENST00000228872 SHISA2Q6UWI4 295 aa13.3□□□□□ -0.28
CDKN1B-201ENST00000228872 TRAV8-4A0A0B4J246 113 aa13.29□□□□□ -0.28
CDKN1B-201ENST00000228872 MED14OSP0DP75 135 aa13.29□□□□□ -0.28
CDKN1B-201ENST00000228872 POM121L12Q8N7R1 296 aa13.29□□□□□ -0.28
CDKN1B-201ENST00000228872 Q8N9W7 124 aa13.29□□□□□ -0.28
CDKN1B-201ENST00000228872 U3KQE9 123 aa13.29□□□□□ -0.28
CDKN1B-201ENST00000228872 WNK2Q9Y3S1 2297 aa13.29□□□□□ -0.28
CDKN1B-201ENST00000228872 M0R1W7 72 aa13.29□□□□□ -0.28
CDKN1B-201ENST00000228872 RPL32P62910 135 aaKnown RBP13.29□□□□□ -0.28
CDKN1B-201ENST00000228872 HERV-K104P63124 156 aa13.29□□□□□ -0.28
CDKN1B-201ENST00000228872 ATXN8Q156A1 80 aa13.29□□□□□ -0.28
CDKN1B-201ENST00000228872 ZNF876PQ49A33 203 aa13.29□□□□□ -0.28
CDKN1B-201ENST00000228872 VMO1Q7Z5L0 202 aa13.29□□□□□ -0.28
CDKN1B-201ENST00000228872 TIMM17AQ99595 171 aa13.29□□□□□ -0.28
CDKN1B-201ENST00000228872 RPL13AP40429 203 aaKnown RBP13.28□□□□□ -0.28
CDKN1B-201ENST00000228872 SMIM20Q8N5G0 67 aa13.28□□□□□ -0.28
CDKN1B-201ENST00000228872 LINC01600Q96MT4 127 aa13.28□□□□□ -0.28
CDKN1B-201ENST00000228872 CSMD1Q96PZ7 3565 aa13.28□□□□□ -0.28
CDKN1B-201ENST00000228872 C15orf53Q8NAA6 179 aa13.28□□□□□ -0.28
CDKN1B-201ENST00000228872 TRAV2A0A0B4J234 112 aa13.27□□□□□ -0.28
CDKN1B-201ENST00000228872 TEX49A0A1B0GTD5 131 aa13.27□□□□□ -0.28
CDKN1B-201ENST00000228872 KLK9Q2XQG4 91 aa13.27□□□□□ -0.28
CDKN1B-201ENST00000228872 C9orf139Q6ZV77 190 aa13.27□□□□□ -0.28
CDKN1B-201ENST00000228872 LINC00477Q96M19 166 aa13.27□□□□□ -0.28
CDKN1B-201ENST00000228872 KLK9Q9UKQ9 250 aa13.27□□□□□ -0.28
CDKN1B-201ENST00000228872 AKAP6Q13023 2319 aa13.27□□□□□ -0.28
CDKN1B-201ENST00000228872 GNRH2O43555 120 aa13.27□□□□□ -0.29
CDKN1B-201ENST00000228872 RNASE3P12724 160 aaKnown RBP13.27□□□□□ -0.29
CDKN1B-201ENST00000228872 POLR2KP53803 58 aaKnown RBP13.27□□□□□ -0.29
CDKN1B-201ENST00000228872 LINC00315P59091 139 aa13.27□□□□□ -0.29
CDKN1B-201ENST00000228872 FAM159AQ6UWV7 190 aa13.27□□□□□ -0.29
CDKN1B-201ENST00000228872 MUSTN1Q8IVN3 82 aa13.27□□□□□ -0.29
CDKN1B-201ENST00000228872 SVEP1Q4LDE5 3571 aa13.27□□□□□ -0.29
CDKN1B-201ENST00000228872 KIF25-AS1Q9Y6Z4 181 aa13.26□□□□□ -0.29
CDKN1B-201ENST00000228872 IGHV4OR15-8A0A075B7B6 117 aa13.26□□□□□ -0.29
CDKN1B-201ENST00000228872 A0A087WW49 117 aa13.26□□□□□ -0.29
CDKN1B-201ENST00000228872 ATP6V0E1O15342 81 aa13.26□□□□□ -0.29
CDKN1B-201ENST00000228872 IGHV4-39P01824 125 aa13.26□□□□□ -0.29
CDKN1B-201ENST00000228872 Q1RN00 199 aa13.26□□□□□ -0.29
CDKN1B-201ENST00000228872 TRBV10-2A0A0K0K1G8 114 aa13.26□□□□□ -0.29
CDKN1B-201ENST00000228872 LEPROTO15243 131 aa13.25□□□□□ -0.29
CDKN1B-201ENST00000228872 EEF1AKMT3Q96AZ1 226 aa13.25□□□□□ -0.29
CDKN1B-201ENST00000228872 OOSP1A8MZH6 123 aa13.25□□□□□ -0.29
CDKN1B-201ENST00000228872 DEFB1P60022 68 aa13.25□□□□□ -0.29
CDKN1B-201ENST00000228872 OR10J6PQ8NGY7 276 aa13.25□□□□□ -0.29
CDKN1B-201ENST00000228872 MED13LQ71F56 2210 aa13.24□□□□□ -0.29
CDKN1B-201ENST00000228872 H3BMM0 161 aa13.24□□□□□ -0.29
CDKN1B-201ENST00000228872 VCYO14598 125 aa13.24□□□□□ -0.29
CDKN1B-201ENST00000228872 RNASE4P34096 147 aaKnown RBP13.24□□□□□ -0.29
CDKN1B-201ENST00000228872 UBE2WQ96B02 151 aa13.24□□□□□ -0.29
CDKN1B-201ENST00000228872 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.24□□□□□ -0.29
CDKN1B-201ENST00000228872 NXPH4O95158 308 aa13.24□□□□□ -0.29
CDKN1B-201ENST00000228872 SUMO4Q6EEV6 95 aa13.24□□□□□ -0.29
CDKN1B-201ENST00000228872 DOPEY1Q5JWR5 2465 aa13.23□□□□□ -0.29
CDKN1B-201ENST00000228872 TMEM223A0PJW6 202 aa13.23□□□□□ -0.29
CDKN1B-201ENST00000228872 G3V318 75 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms