RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 FOXI2Q6ZQN5 318 aa15.68■□□□□ 0.1
CCDC130-201ENST00000221554 NAV2Q8IVL1 2488 aa15.68■□□□□ 0.1
CCDC130-201ENST00000221554 CCDC168Q8NDH2 2452 aa15.68■□□□□ 0.1
CCDC130-201ENST00000221554 SPRY2O43597 315 aa15.67■□□□□ 0.1
CCDC130-201ENST00000221554 GCSHP23434 173 aa15.67■□□□□ 0.1
CCDC130-201ENST00000221554 CEND1Q8N111 149 aa15.67■□□□□ 0.1
CCDC130-201ENST00000221554 BAALCQ8WXS3 180 aa15.67■□□□□ 0.1
CCDC130-201ENST00000221554 TMEM141Q96I45 108 aa15.67■□□□□ 0.1
CCDC130-201ENST00000221554 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.67■□□□□ 0.16e-7■■■□□ 15.6
CCDC130-201ENST00000221554 IGHV1OR15-1A0A075B7D0 117 aa15.67■□□□□ 0.1
CCDC130-201ENST00000221554 SUMO4Q6EEV6 95 aa15.67■□□□□ 0.1
CCDC130-201ENST00000221554 C10orf99Q6UWK7 81 aa15.67■□□□□ 0.1
CCDC130-201ENST00000221554 OR11H12B2RN74 326 aa15.66■□□□□ 0.1
CCDC130-201ENST00000221554 H3BUT2 72 aa15.66■□□□□ 0.1
CCDC130-201ENST00000221554 HOXD3P31249 432 aaPredicted RBP15.66■□□□□ 0.1
CCDC130-201ENST00000221554 KRTAP10-9P60411 292 aa15.66■□□□□ 0.1
CCDC130-201ENST00000221554 OR11H1Q8NG94 326 aa15.66■□□□□ 0.1
CCDC130-201ENST00000221554 OR11H2Q8NH07 326 aa15.66■□□□□ 0.1
CCDC130-201ENST00000221554 OR5A1Q8NGJ0 315 aa15.65■□□□□ 0.1
CCDC130-201ENST00000221554 VPS13CQ709C8 3753 aa15.65■□□□□ 0.1
CCDC130-201ENST00000221554 TRGV11A0A075B6L2 103 aa15.64■□□□□ 0.1
CCDC130-201ENST00000221554 TRAV2A0A0B4J234 112 aa15.64■□□□□ 0.1
CCDC130-201ENST00000221554 GAGE12BA1L429 117 aa15.64■□□□□ 0.1
CCDC130-201ENST00000221554 F5H697 171 aa15.64■□□□□ 0.1
CCDC130-201ENST00000221554 K7EP34 96 aa15.64■□□□□ 0.1
CCDC130-201ENST00000221554 UFSP1Q6NVU6 142 aa15.64■□□□□ 0.1
CCDC130-201ENST00000221554 TRBV27A0A0K0K1C4 114 aa15.64■□□□□ 0.09
CCDC130-201ENST00000221554 PRSS29PA6NIE9 313 aa15.64■□□□□ 0.09
CCDC130-201ENST00000221554 ZFP2Q6ZN57 461 aa15.64■□□□□ 0.09
CCDC130-201ENST00000221554 Q8N2B8 174 aa15.64■□□□□ 0.09
CCDC130-201ENST00000221554 MYMXA0A1B0GTQ4 84 aa15.63■□□□□ 0.09
CCDC130-201ENST00000221554 A0A1W2PPM0 123 aa15.63■□□□□ 0.09
CCDC130-201ENST00000221554 E9PLD3 99 aa15.63■□□□□ 0.09
CCDC130-201ENST00000221554 RIPPLY3P57055 190 aa15.63■□□□□ 0.09
CCDC130-201ENST00000221554 RNASE8Q8TDE3 154 aaKnown RBP15.63■□□□□ 0.09
CCDC130-201ENST00000221554 TIMM17AQ99595 171 aa15.63■□□□□ 0.09
CCDC130-201ENST00000221554 CST9LQ9H4G1 147 aa15.63■□□□□ 0.09
CCDC130-201ENST00000221554 SELENOKQ9Y6D0 94 aa15.63■□□□□ 0.09
CCDC130-201ENST00000221554 FABP2P12104 132 aa15.62■□□□□ 0.09
CCDC130-201ENST00000221554 DEFB113Q30KQ7 82 aa15.62■□□□□ 0.09
CCDC130-201ENST00000221554 MAPKAPK5-AS1Q8N8E1 139 aa15.62■□□□□ 0.09
CCDC130-201ENST00000221554 TEX15Q9BXT5 2789 aa15.62■□□□□ 0.09
CCDC130-201ENST00000221554 HOXA3O43365 443 aaPredicted RBP15.62■□□□□ 0.09
CCDC130-201ENST00000221554 Q8N1Y9 231 aa15.62■□□□□ 0.09
CCDC130-201ENST00000221554 TEX29Q8N6K0 151 aa15.62■□□□□ 0.09
CCDC130-201ENST00000221554 TTTY13Q9BZ97 58 aa15.62■□□□□ 0.09
CCDC130-201ENST00000221554 FXYD2P54710 66 aa15.61■□□□□ 0.09
CCDC130-201ENST00000221554 PMVKQ15126 192 aa15.61■□□□□ 0.09
CCDC130-201ENST00000221554 TRPT1Q86TN4 253 aaKnown RBP15.61■□□□□ 0.09
CCDC130-201ENST00000221554 PEMTQ9UBM1 199 aa15.61■□□□□ 0.09
CCDC130-201ENST00000221554 MYO9AB2RTY4 2548 aa15.61■□□□□ 0.09
CCDC130-201ENST00000221554 A0A087WWL8 130 aa15.6■□□□□ 0.09
CCDC130-201ENST00000221554 SDHAF1A6NFY7 115 aa15.6■□□□□ 0.09
CCDC130-201ENST00000221554 IGIPA6NJ69 53 aa15.6■□□□□ 0.09
CCDC130-201ENST00000221554 HERVK_113P61574 105 aa15.6■□□□□ 0.09
CCDC130-201ENST00000221554 RHOHQ15669 191 aa15.6■□□□□ 0.09
CCDC130-201ENST00000221554 TCTEX1D4Q5JR98 221 aa15.6■□□□□ 0.09
CCDC130-201ENST00000221554 SAMD5Q5TGI4 173 aa15.6■□□□□ 0.09
CCDC130-201ENST00000221554 WFDC12Q8WWY7 111 aa15.6■□□□□ 0.09
CCDC130-201ENST00000221554 RAB37Q96AX2 223 aa15.6■□□□□ 0.09
CCDC130-201ENST00000221554 JMJD8Q96S16 334 aa15.6■□□□□ 0.09
CCDC130-201ENST00000221554 MAPK1IP1LQ8NDC0 245 aa15.59■□□□□ 0.09
CCDC130-201ENST00000221554 MDFICQ9P1T7 246 aa15.59■□□□□ 0.09
CCDC130-201ENST00000221554 TP53TG1Q9Y2A0 90 aa15.59■□□□□ 0.09
CCDC130-201ENST00000221554 MUC4Q99102 2169 aa15.59■□□□□ 0.09
CCDC130-201ENST00000221554 SPINK13Q1W4C9 94 aa15.59■□□□□ 0.09
CCDC130-201ENST00000221554 AMTNQ6UX39 209 aa15.59■□□□□ 0.09
CCDC130-201ENST00000221554 HIST1H4GQ99525 98 aa15.59■□□□□ 0.09
CCDC130-201ENST00000221554 JPT2Q9H910 190 aa15.59■□□□□ 0.09
CCDC130-201ENST00000221554 ZNF256Q9Y2P7 627 aaPredicted RBP15.59■□□□□ 0.09
CCDC130-201ENST00000221554 TRAV12-2A0A075B6T6 113 aa15.58■□□□□ 0.08
CCDC130-201ENST00000221554 A8MTW9 85 aa15.58■□□□□ 0.08
CCDC130-201ENST00000221554 IGKV3-20P01619 116 aa15.58■□□□□ 0.08
CCDC130-201ENST00000221554 CRYGDP07320 174 aa15.58■□□□□ 0.08
CCDC130-201ENST00000221554 RBX1P62877 108 aa15.58■□□□□ 0.08
CCDC130-201ENST00000221554 OCIAD2Q56VL3 154 aa15.58■□□□□ 0.08
CCDC130-201ENST00000221554 K7ERU9 68 aa15.57■□□□□ 0.08
CCDC130-201ENST00000221554 M0QY20 66 aa15.57■□□□□ 0.08
CCDC130-201ENST00000221554 SPCS1Q9Y6A9 102 aa15.57■□□□□ 0.08
CCDC130-201ENST00000221554 ZNF56Q15929 161 aa15.57■□□□□ 0.08
CCDC130-201ENST00000221554 NSUN5P1Q3KNT7 163 aa15.57■□□□□ 0.08
CCDC130-201ENST00000221554 Q5PR19 223 aa15.57■□□□□ 0.08
CCDC130-201ENST00000221554 PIK3CD-AS1Q5SR53 167 aa15.57■□□□□ 0.08
CCDC130-201ENST00000221554 TMEM86BQ8N661 226 aa15.57■□□□□ 0.08
CCDC130-201ENST00000221554 EDA2RQ9HAV5 297 aa15.57■□□□□ 0.08
CCDC130-201ENST00000221554 FAM74A4Q5TZK3 123 aa15.56■□□□□ 0.08
CCDC130-201ENST00000221554 PHLDA1Q8WV24 401 aaPredicted RBP15.56■□□□□ 0.08
CCDC130-201ENST00000221554 C4orf3Q8WVX3 66 aa15.55■□□□□ 0.08
CCDC130-201ENST00000221554 DUX5Q96PT3 197 aa15.55■□□□□ 0.08
CCDC130-201ENST00000221554 PRADC1Q9BSG0 188 aa15.55■□□□□ 0.08
CCDC130-201ENST00000221554 NHP2Q9NX24 153 aaKnown RBP15.55■□□□□ 0.08
CCDC130-201ENST00000221554 SCGB2A2Q13296 93 aa15.54■□□□□ 0.08
CCDC130-201ENST00000221554 ZNF876PQ49A33 203 aa15.54■□□□□ 0.08
CCDC130-201ENST00000221554 NEGR1Q7Z3B1 354 aa15.54■□□□□ 0.08
CCDC130-201ENST00000221554 CELSR1Q9NYQ6 3014 aa15.54■□□□□ 0.08
CCDC130-201ENST00000221554 TRBV7-3A0A075B6L6 115 aa15.54■□□□□ 0.08
CCDC130-201ENST00000221554 PTH2Q96A98 100 aa15.54■□□□□ 0.08
CCDC130-201ENST00000221554 TSHBP01222 138 aa15.53■□□□□ 0.08
CCDC130-201ENST00000221554 AKAP9Q99996 3911 aa15.53■□□□□ 0.08
CCDC130-201ENST00000221554 PRRC2AP48634 2157 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms