RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 OR11H12B2RN74 326 aa12.64□□□□□ -0.39
RABGGTA-201ENST00000216840 NDUFA11Q86Y39 141 aa12.64□□□□□ -0.39
RABGGTA-201ENST00000216840 C20orf78Q9BR46 151 aa12.64□□□□□ -0.39
RABGGTA-201ENST00000216840 MIEN1Q9BRT3 115 aa12.64□□□□□ -0.39
RABGGTA-201ENST00000216840 SMIM2Q9BVW6 85 aa12.64□□□□□ -0.39
RABGGTA-201ENST00000216840 FN1P02751 2386 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-201ENST00000216840 A0A087WWL8 130 aa12.63□□□□□ -0.39
RABGGTA-201ENST00000216840 SUMO2P61956 95 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-201ENST00000216840 HIVEP1P15822 2718 aa12.63□□□□□ -0.39
RABGGTA-201ENST00000216840 IGLV1-51P01701 117 aa12.63□□□□□ -0.39
RABGGTA-201ENST00000216840 LAGE3Q14657 143 aa12.63□□□□□ -0.39
RABGGTA-201ENST00000216840 TMEM158Q8WZ71 300 aa12.63□□□□□ -0.39
RABGGTA-201ENST00000216840 TCAPO15273 167 aa12.62□□□□□ -0.39
RABGGTA-201ENST00000216840 IFI27L1Q96BM0 104 aa12.62□□□□□ -0.39
RABGGTA-201ENST00000216840 PPP1R17O96001 155 aa12.61□□□□□ -0.39
RABGGTA-201ENST00000216840 HTN1P15515 57 aa12.61□□□□□ -0.39
RABGGTA-201ENST00000216840 SUMO4Q6EEV6 95 aa12.61□□□□□ -0.39
RABGGTA-201ENST00000216840 PMCHL2Q9BQD1 86 aa12.61□□□□□ -0.39
RABGGTA-201ENST00000216840 INSP01308 110 aa12.61□□□□□ -0.39
RABGGTA-201ENST00000216840 IGLC3P0DOY3 106 aa12.61□□□□□ -0.39
RABGGTA-201ENST00000216840 IGLL1P15814 213 aa12.61□□□□□ -0.39
RABGGTA-201ENST00000216840 TRPT1Q86TN4 253 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-201ENST00000216840 STHQ8IWL8 128 aa12.61□□□□□ -0.39
RABGGTA-201ENST00000216840 CRLF1O75462 422 aa12.6□□□□□ -0.39
RABGGTA-201ENST00000216840 PRM2P04554 102 aa12.6□□□□□ -0.39
RABGGTA-201ENST00000216840 CRYGDP07320 174 aa12.6□□□□□ -0.39
RABGGTA-201ENST00000216840 ZNF876PQ49A33 203 aa12.6□□□□□ -0.39
RABGGTA-201ENST00000216840 LINC00467Q9BRT7 94 aa12.6□□□□□ -0.39
RABGGTA-201ENST00000216840 C2CD3Q4AC94 2353 aa12.6□□□□□ -0.39
RABGGTA-201ENST00000216840 C18orf15Q96N68 181 aa12.6□□□□□ -0.39
RABGGTA-201ENST00000216840 CMC4P56277 68 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-201ENST00000216840 FAM74A4Q5TZK3 123 aa12.59□□□□□ -0.39
RABGGTA-201ENST00000216840 LINC01587Q99440 93 aa12.59□□□□□ -0.39
RABGGTA-201ENST00000216840 hDV102S1A0JD36 115 aa12.58□□□□□ -0.39
RABGGTA-201ENST00000216840 F5H697 171 aa12.58□□□□□ -0.39
RABGGTA-201ENST00000216840 LGALS9BQ3B8N2 356 aa12.58□□□□□ -0.39
RABGGTA-201ENST00000216840 LGALS9CQ6DKI2 356 aa12.58□□□□□ -0.39
RABGGTA-201ENST00000216840 BEAN1Q3B7T3 259 aa12.58□□□□□ -0.4
RABGGTA-201ENST00000216840 XCL2Q9UBD3 114 aa12.58□□□□□ -0.4
RABGGTA-201ENST00000216840 UQCR10Q9UDW1 63 aa12.58□□□□□ -0.4
RABGGTA-201ENST00000216840 CSTL1Q9H114 145 aa12.57□□□□□ -0.4
RABGGTA-201ENST00000216840 PF4P02776 101 aa12.57□□□□□ -0.4
RABGGTA-201ENST00000216840 RPL32P62910 135 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-201ENST00000216840 ZNF415Q09FC8 603 aa12.57□□□□□ -0.4
RABGGTA-201ENST00000216840 ORMDL2Q53FV1 153 aa12.57□□□□□ -0.4
RABGGTA-201ENST00000216840 LINC00482Q8N8I6 264 aa12.57□□□□□ -0.4
RABGGTA-201ENST00000216840 ST20Q9HBF5 79 aa12.57□□□□□ -0.4
RABGGTA-201ENST00000216840 K7EMI3 77 aa12.56□□□□□ -0.4
RABGGTA-201ENST00000216840 NUDT3O95989 172 aa12.56□□□□□ -0.4
RABGGTA-201ENST00000216840 ZNF56Q15929 161 aa12.56□□□□□ -0.4
RABGGTA-201ENST00000216840 C11orf72Q8NBR9 251 aa12.56□□□□□ -0.4
RABGGTA-201ENST00000216840 FAM110AQ9BQ89 295 aa12.56□□□□□ -0.4
RABGGTA-201ENST00000216840 C19orf73Q9NVV2 129 aa12.56□□□□□ -0.4
RABGGTA-201ENST00000216840 GOLT1BQ9Y3E0 138 aa12.56□□□□□ -0.4
RABGGTA-201ENST00000216840 ZMAT5Q9UDW3 170 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-201ENST00000216840 HSBP1L1C9JCN9 74 aa12.55□□□□□ -0.4
RABGGTA-201ENST00000216840 M0QY20 66 aa12.55□□□□□ -0.4
RABGGTA-201ENST00000216840 M0R2P5 195 aa12.55□□□□□ -0.4
RABGGTA-201ENST00000216840 POLR2KP53803 58 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-201ENST00000216840 C1orf158Q8N1D5 194 aa12.55□□□□□ -0.4
RABGGTA-201ENST00000216840 NIPBLQ6KC79 2804 aaeCLIP12.55□□□□□ -0.4
RABGGTA-201ENST00000216840 ATP5LO75964 103 aa12.54□□□□□ -0.4
RABGGTA-201ENST00000216840 MORN3Q6PF18 240 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-201ENST00000216840 NEGR1Q7Z3B1 354 aa12.54□□□□□ -0.4
RABGGTA-201ENST00000216840 PTH2Q96A98 100 aa12.54□□□□□ -0.4
RABGGTA-201ENST00000216840 WFDC10AQ9H1F0 79 aa12.54□□□□□ -0.4
RABGGTA-201ENST00000216840 TRBV6-5A0A0K0K1A5 114 aa12.53□□□□□ -0.4
RABGGTA-201ENST00000216840 NUTF2P61970 127 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-201ENST00000216840 EREGO14944 169 aa12.53□□□□□ -0.4
RABGGTA-201ENST00000216840 PIK3CD-AS1Q5SR53 167 aa12.53□□□□□ -0.4
RABGGTA-201ENST00000216840 DKK2Q9UBU2 259 aa12.53□□□□□ -0.4
RABGGTA-201ENST00000216840 NACAE9PAV3 2078 aa12.53□□□□□ -0.4
RABGGTA-201ENST00000216840 Q6ZN92 141 aa12.52□□□□□ -0.4
RABGGTA-201ENST00000216840 TOMM6Q96B49 74 aa12.52□□□□□ -0.4
RABGGTA-201ENST00000216840 TMEM208Q9BTX3 173 aa12.52□□□□□ -0.4
RABGGTA-201ENST00000216840 SNHG12Q9BXW3 62 aa12.52□□□□□ -0.4
RABGGTA-201ENST00000216840 PRSS1P07477 247 aa12.52□□□□□ -0.41
RABGGTA-201ENST00000216840 AZU1P20160 251 aa12.52□□□□□ -0.41
RABGGTA-201ENST00000216840 ODF1Q14990 250 aa12.52□□□□□ -0.41
RABGGTA-201ENST00000216840 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-201ENST00000216840 SPXQ9BT56 116 aa12.52□□□□□ -0.41
RABGGTA-201ENST00000216840 JMJD1CQ15652 2540 aa12.51□□□□□ -0.41
RABGGTA-201ENST00000216840 SDHAF1A6NFY7 115 aa12.51□□□□□ -0.41
RABGGTA-201ENST00000216840 VCYO14598 125 aa12.51□□□□□ -0.41
RABGGTA-201ENST00000216840 GIG44P09565 113 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-201ENST00000216840 UFSP1Q6NVU6 142 aa12.51□□□□□ -0.41
RABGGTA-201ENST00000216840 A8MWV9 139 aa12.5□□□□□ -0.41
RABGGTA-201ENST00000216840 M0R143 59 aa12.5□□□□□ -0.41
RABGGTA-201ENST00000216840 IGHV3OR16-12A0A075B7B8 117 aa12.5□□□□□ -0.41
RABGGTA-201ENST00000216840 TRBV27A0A0K0K1C4 114 aa12.5□□□□□ -0.41
RABGGTA-201ENST00000216840 HNRNPA3P51991 378 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-201ENST00000216840 C2orf66Q6UXQ4 117 aa12.5□□□□□ -0.41
RABGGTA-201ENST00000216840 MRPL52Q86TS9 123 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-201ENST00000216840 ZMAT4Q9H898 229 aa12.49□□□□□ -0.41
RABGGTA-201ENST00000216840 EDA2RQ9HAV5 297 aa12.49□□□□□ -0.41
RABGGTA-201ENST00000216840 BAHCC1Q9P281 2608 aa12.49□□□□□ -0.41
RABGGTA-201ENST00000216840 IGHV3-73A0A0B4J1V6 119 aa12.49□□□□□ -0.41
RABGGTA-201ENST00000216840 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-201ENST00000216840 RPL35AP18077 110 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-201ENST00000216840 SCGB3A1Q96QR1 104 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms