RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 TRBV10-1A0A0K0K1A3 114 aa11.92□□□□□ -0.5
MRPL28-201ENST00000199706 LOC100131303A0A0U1RQF7 123 aa11.92□□□□□ -0.5
MRPL28-201ENST00000199706 P01737 135 aa11.92□□□□□ -0.5
MRPL28-201ENST00000199706 OR10AG1Q8NH19 301 aa11.92□□□□□ -0.5
MRPL28-201ENST00000199706 SAMD10Q9BYL1 202 aa11.92□□□□□ -0.5
MRPL28-201ENST00000199706 TOR2AQ5JU69 321 aa11.91□□□□□ -0.5
MRPL28-201ENST00000199706 OR2D3Q8NGH3 330 aa11.91□□□□□ -0.5
MRPL28-201ENST00000199706 KRTAP1-5Q9BYS1 174 aa11.91□□□□□ -0.5
MRPL28-201ENST00000199706 JPT2Q9H910 190 aa11.91□□□□□ -0.5
MRPL28-201ENST00000199706 F2Z2F3 143 aa11.9□□□□□ -0.5
MRPL28-201ENST00000199706 DNAH10OSP0CZ25 163 aa11.9□□□□□ -0.5
MRPL28-201ENST00000199706 Q6ZSN1 163 aa11.9□□□□□ -0.5
MRPL28-201ENST00000199706 A0A1B0GVY2 172 aa11.89□□□□□ -0.51
MRPL28-201ENST00000199706 PRSS29PA6NIE9 313 aa11.89□□□□□ -0.51
MRPL28-201ENST00000199706 RAB4BP61018 213 aa11.89□□□□□ -0.51
MRPL28-201ENST00000199706 CACNG7P62955 275 aa11.89□□□□□ -0.51
MRPL28-201ENST00000199706 FAM74A4Q5TZK3 123 aa11.89□□□□□ -0.51
MRPL28-201ENST00000199706 SPANXN1Q5VSR9 72 aa11.89□□□□□ -0.51
MRPL28-201ENST00000199706 FER1L6-AS1Q8NA97 138 aa11.89□□□□□ -0.51
MRPL28-201ENST00000199706 OCC1Q8TAD7 63 aa11.89□□□□□ -0.51
MRPL28-201ENST00000199706 AP1S3Q96PC3 154 aa11.89□□□□□ -0.51
MRPL28-201ENST00000199706 EIF5A2Q9GZV4 153 aaKnown RBP11.89□□□□□ -0.51
MRPL28-201ENST00000199706 GTSF1LQ9H1H1 148 aa11.89□□□□□ -0.51
MRPL28-201ENST00000199706 SMDT1Q9H4I9 107 aa11.89□□□□□ -0.51
MRPL28-201ENST00000199706 PKHD1P08F94 4074 aa11.88□□□□□ -0.51
MRPL28-201ENST00000199706 TRAV9-2A0A087WT02 112 aa11.88□□□□□ -0.51
MRPL28-201ENST00000199706 A0A087WWL8 130 aa11.88□□□□□ -0.51
MRPL28-201ENST00000199706 K7EN84 100 aa11.88□□□□□ -0.51
MRPL28-201ENST00000199706 CTRLP40313 264 aa11.88□□□□□ -0.51
MRPL28-201ENST00000199706 WDR73Q6P4I2 378 aa11.88□□□□□ -0.51
MRPL28-201ENST00000199706 FAM231DQ6ZW35 169 aa11.88□□□□□ -0.51
MRPL28-201ENST00000199706 ATP6V0E2Q8NHE4 81 aa11.88□□□□□ -0.51
MRPL28-201ENST00000199706 CNFNQ9BYD5 112 aa11.88□□□□□ -0.51
MRPL28-201ENST00000199706 LELP1Q5T871 98 aa11.87□□□□□ -0.51
MRPL28-201ENST00000199706 C14orf178Q8N769 122 aaPredicted RBP11.87□□□□□ -0.51
MRPL28-201ENST00000199706 NUDT10Q8NFP7 164 aa11.87□□□□□ -0.51
MRPL28-201ENST00000199706 OR10G8Q8NGN5 311 aa11.87□□□□□ -0.51
MRPL28-201ENST00000199706 NUDT11Q96G61 164 aa11.87□□□□□ -0.51
MRPL28-201ENST00000199706 RPP21Q9H633 154 aaKnown RBP11.87□□□□□ -0.51
MRPL28-201ENST00000199706 A0A087WWC5 75 aa11.86□□□□□ -0.51
MRPL28-201ENST00000199706 TRAV8-6A0A0B4J262 113 aa11.86□□□□□ -0.51
MRPL28-201ENST00000199706 SRP19P09132 144 aaKnown RBP11.86□□□□□ -0.51
MRPL28-201ENST00000199706 CT83Q5H943 113 aa11.86□□□□□ -0.51
MRPL28-201ENST00000199706 LINC01556Q5JQF7 62 aa11.86□□□□□ -0.51
MRPL28-201ENST00000199706 WFDC10BQ8IUB3 73 aa11.86□□□□□ -0.51
MRPL28-201ENST00000199706 C10orf126Q8N4M7 172 aa11.86□□□□□ -0.51
MRPL28-201ENST00000199706 SMIM7Q9BQ49 75 aa11.86□□□□□ -0.51
MRPL28-201ENST00000199706 KIF25-AS1Q9Y6Z4 181 aa11.86□□□□□ -0.51
MRPL28-201ENST00000199706 PKD1P98161 4303 aa11.86□□□□□ -0.51
MRPL28-201ENST00000199706 EVI2AP22794 236 aa11.85□□□□□ -0.51
MRPL28-201ENST00000199706 FAM74A3Q4VXF1 159 aa11.85□□□□□ -0.51
MRPL28-201ENST00000199706 IGHV3-38A0A0C4DH36 116 aa11.84□□□□□ -0.51
MRPL28-201ENST00000199706 GAGE12JA6NER3 117 aa11.84□□□□□ -0.51
MRPL28-201ENST00000199706 GZMBP10144 247 aa11.84□□□□□ -0.51
MRPL28-201ENST00000199706 GAGE1Q13065 139 aa11.84□□□□□ -0.51
MRPL28-201ENST00000199706 GAGE4Q13068 117 aa11.84□□□□□ -0.51
MRPL28-201ENST00000199706 GAGE5Q13069 117 aa11.84□□□□□ -0.51
MRPL28-201ENST00000199706 GAGE13Q4V321 117 aa11.84□□□□□ -0.51
MRPL28-201ENST00000199706 TRBV7-3A0A075B6L6 115 aa11.83□□□□□ -0.52
MRPL28-201ENST00000199706 ZNF727A8MUV8 499 aa11.83□□□□□ -0.52
MRPL28-201ENST00000199706 SMIM17P0DL12 118 aa11.83□□□□□ -0.52
MRPL28-201ENST00000199706 RPL36AP83881 106 aaKnown RBP11.83□□□□□ -0.52
MRPL28-201ENST00000199706 LINC01551Q86U37 167 aa11.83□□□□□ -0.52
MRPL28-201ENST00000199706 NFE4Q86UQ8 179 aa11.83□□□□□ -0.52
MRPL28-201ENST00000199706 RPL36ALQ969Q0 106 aaKnown RBP11.83□□□□□ -0.52
MRPL28-201ENST00000199706 RNASE7Q9H1E1 156 aaKnown RBP11.83□□□□□ -0.52
MRPL28-201ENST00000199706 TRGC1P0CF51 173 aa11.82□□□□□ -0.52
MRPL28-201ENST00000199706 LINC00315P59091 139 aa11.82□□□□□ -0.52
MRPL28-201ENST00000199706 UBE2D3P61077 147 aa11.82□□□□□ -0.52
MRPL28-201ENST00000199706 UBE2D2P62837 147 aa11.82□□□□□ -0.52
MRPL28-201ENST00000199706 ZNF56Q15929 161 aa11.82□□□□□ -0.52
MRPL28-201ENST00000199706 Q6ZRN7 208 aaPredicted RBP11.82□□□□□ -0.52
MRPL28-201ENST00000199706 TPPP3Q9BW30 176 aa11.82□□□□□ -0.52
MRPL28-201ENST00000199706 Q9UF83 564 aa11.82□□□□□ -0.52
MRPL28-201ENST00000199706 A8MWL6 223 aa11.81□□□□□ -0.52
MRPL28-201ENST00000199706 PEA15Q15121 130 aa11.81□□□□□ -0.52
MRPL28-201ENST00000199706 OR10J3Q5JRS4 329 aa11.81□□□□□ -0.52
MRPL28-201ENST00000199706 LYZL1Q6UWQ5 148 aa11.81□□□□□ -0.52
MRPL28-201ENST00000199706 MUC21A0A0G2JKD1 596 aa11.8□□□□□ -0.52
MRPL28-201ENST00000199706 MUC21A0A140T8X8 626 aa11.8□□□□□ -0.52
MRPL28-201ENST00000199706 FAM231BA6NCW3 169 aa11.8□□□□□ -0.52
MRPL28-201ENST00000199706 CEBPGP53567 150 aa11.8□□□□□ -0.52
MRPL28-201ENST00000199706 FOXA3P55318 350 aaPredicted RBP11.8□□□□□ -0.52
MRPL28-201ENST00000199706 OSTCQ9NRP0 149 aa11.8□□□□□ -0.52
MRPL28-201ENST00000199706 H7C1H1 209 aa11.79□□□□□ -0.52
MRPL28-201ENST00000199706 GATCO43716 136 aaKnown RBP11.79□□□□□ -0.52
MRPL28-201ENST00000199706 ERVFC1-1P60608 527 aa11.79□□□□□ -0.52
MRPL28-201ENST00000199706 TNP2Q05952 138 aa11.79□□□□□ -0.52
MRPL28-201ENST00000199706 LAGE3Q14657 143 aa11.79□□□□□ -0.52
MRPL28-201ENST00000199706 NEXN-AS1Q8NBZ9 246 aa11.79□□□□□ -0.52
MRPL28-201ENST00000199706 GTSF1Q8WW33 167 aa11.79□□□□□ -0.52
MRPL28-201ENST00000199706 GFRA4Q9GZZ7 299 aa11.79□□□□□ -0.52
MRPL28-201ENST00000199706 MSRB1Q9NZV6 116 aa11.79□□□□□ -0.52
MRPL28-201ENST00000199706 NTF3P20783 257 aa11.78□□□□□ -0.52
MRPL28-201ENST00000199706 CHCHD7Q9BUK0 85 aa11.78□□□□□ -0.52
MRPL28-201ENST00000199706 DPH3P1Q9H4G8 78 aa11.78□□□□□ -0.52
MRPL28-201ENST00000199706 DNAH11Q96DT5 4516 aa11.78□□□□□ -0.52
MRPL28-201ENST00000199706 IBA57-AS1B1ANH7 110 aa11.77□□□□□ -0.53
MRPL28-201ENST00000199706 F5H697 171 aa11.77□□□□□ -0.53
MRPL28-201ENST00000199706 M0QY20 66 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms