RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ADARB2-AS1A8MUL3 147 aa10.55□□□□□ -0.72
SCARB2-227ENST00000640957 MFAP4P55083 255 aa10.55□□□□□ -0.72
SCARB2-227ENST00000640957 Q8NA96 180 aa10.55□□□□□ -0.72
SCARB2-227ENST00000640957 NUP37Q8NFH4 326 aa10.55□□□□□ -0.72
SCARB2-227ENST00000640957 DUSP14O95147 198 aaKnown RBP10.55□□□□□ -0.72
SCARB2-227ENST00000640957 NPC2P61916 151 aa10.55□□□□□ -0.72
SCARB2-227ENST00000640957 Q1RN00 199 aa10.55□□□□□ -0.72
SCARB2-227ENST00000640957 PVRIGQ6DKI7 326 aa10.55□□□□□ -0.72
SCARB2-227ENST00000640957 LYPD1Q8N2G4 141 aa10.55□□□□□ -0.72
SCARB2-227ENST00000640957 RASL10AQ92737 203 aa10.55□□□□□ -0.72
SCARB2-227ENST00000640957 RPL39P62891 51 aaKnown RBP10.54□□□□□ -0.72
SCARB2-227ENST00000640957 OPRPNQ99935 248 aaPredicted RBP10.54□□□□□ -0.72
SCARB2-227ENST00000640957 A8MWV9 139 aa10.54□□□□□ -0.72
SCARB2-227ENST00000640957 F8W735 103 aaPredicted RBP10.54□□□□□ -0.72
SCARB2-227ENST00000640957 S100A4P26447 101 aaKnown RBP10.54□□□□□ -0.72
SCARB2-227ENST00000640957 C2orf66Q6UXQ4 117 aa10.54□□□□□ -0.72
SCARB2-227ENST00000640957 PLNP26678 52 aa10.53□□□□□ -0.72
SCARB2-227ENST00000640957 PPDPFLQ8WWR9 84 aa10.53□□□□□ -0.72
SCARB2-227ENST00000640957 VPS13CQ709C8 3753 aa10.53□□□□□ -0.72
SCARB2-227ENST00000640957 IGHV3OR16-10A0A075B7F0 116 aa10.53□□□□□ -0.72
SCARB2-227ENST00000640957 IGLV1-47P01700 117 aa10.53□□□□□ -0.72
SCARB2-227ENST00000640957 LY6DQ14210 128 aa10.53□□□□□ -0.72
SCARB2-227ENST00000640957 CLEC3BP05452 202 aa10.53□□□□□ -0.72
SCARB2-227ENST00000640957 ELANEP08246 267 aa10.53□□□□□ -0.72
SCARB2-227ENST00000640957 TEN1Q86WV5 123 aa10.53□□□□□ -0.72
SCARB2-227ENST00000640957 JPT2Q9H910 190 aa10.53□□□□□ -0.72
SCARB2-227ENST00000640957 SHISA9B4DS77 424 aa10.52□□□□□ -0.72
SCARB2-227ENST00000640957 ZNF672Q499Z4 452 aaPredicted RBP10.52□□□□□ -0.72
SCARB2-227ENST00000640957 PRR9Q5T870 116 aa10.52□□□□□ -0.72
SCARB2-227ENST00000640957 NTN5Q8WTR8 489 aaPredicted RBP10.52□□□□□ -0.72
SCARB2-227ENST00000640957 BAALCQ8WXS3 180 aa10.52□□□□□ -0.72
SCARB2-227ENST00000640957 CRYBG3Q68DQ2 2970 aa10.52□□□□□ -0.73
SCARB2-227ENST00000640957 ABCA12Q86UK0 2595 aa10.52□□□□□ -0.73
SCARB2-227ENST00000640957 TRBV6-1A0A0K0K1D8 114 aa10.52□□□□□ -0.73
SCARB2-227ENST00000640957 C11orf86A6NJI1 115 aa10.52□□□□□ -0.73
SCARB2-227ENST00000640957 CTSGP08311 255 aa10.52□□□□□ -0.73
SCARB2-227ENST00000640957 ZNF688P0C7X2 276 aa10.52□□□□□ -0.73
SCARB2-227ENST00000640957 GAGE5Q13069 117 aa10.52□□□□□ -0.73
SCARB2-227ENST00000640957 GAGE6Q13070 117 aa10.52□□□□□ -0.73
SCARB2-227ENST00000640957 LINC00311Q8N616 119 aa10.52□□□□□ -0.73
SCARB2-227ENST00000640957 NOTCH2Q04721 2471 aa10.52□□□□□ -0.73
SCARB2-227ENST00000640957 NBR2O15453 112 aa10.52□□□□□ -0.73
SCARB2-227ENST00000640957 NHLRC4P0CG21 123 aaPredicted RBP10.52□□□□□ -0.73
SCARB2-227ENST00000640957 TSPEAR-AS2P59090 65 aa10.52□□□□□ -0.73
SCARB2-227ENST00000640957 RPL11P62913 178 aaKnown RBP10.52□□□□□ -0.73
SCARB2-227ENST00000640957 CDSNQ15517 529 aa10.52□□□□□ -0.73
SCARB2-227ENST00000640957 PKD1L2Q7Z442 2459 aa10.51□□□□□ -0.73
SCARB2-227ENST00000640957 TRAV2A0A0B4J234 112 aa10.51□□□□□ -0.73
SCARB2-227ENST00000640957 TEX49A0A1B0GTD5 131 aa10.51□□□□□ -0.73
SCARB2-227ENST00000640957 CFC1BP0CG36 223 aa10.51□□□□□ -0.73
SCARB2-227ENST00000640957 CFC1P0CG37 223 aa10.51□□□□□ -0.73
SCARB2-227ENST00000640957 NDUFA11Q86Y39 141 aa10.51□□□□□ -0.73
SCARB2-227ENST00000640957 OR11H6Q8NGC7 330 aa10.51□□□□□ -0.73
SCARB2-227ENST00000640957 TIMD4Q96H15 378 aa10.51□□□□□ -0.73
SCARB2-227ENST00000640957 SMIM2Q9BVW6 85 aa10.51□□□□□ -0.73
SCARB2-227ENST00000640957 F6UB75 175 aa10.51□□□□□ -0.73
SCARB2-227ENST00000640957 CLEC19AQ6UXS0 136 aa10.51□□□□□ -0.73
SCARB2-227ENST00000640957 B9A039 149 aa10.5□□□□□ -0.73
SCARB2-227ENST00000640957 TTC32Q5I0X7 151 aa10.5□□□□□ -0.73
SCARB2-227ENST00000640957 PIFOQ8TCI5 191 aa10.5□□□□□ -0.73
SCARB2-227ENST00000640957 ZNF580Q9UK33 172 aa10.5□□□□□ -0.73
SCARB2-227ENST00000640957 IGHV7-4-1A0A0J9YVY3 117 aa10.5□□□□□ -0.73
SCARB2-227ENST00000640957 GAGE2BQ13066 116 aa10.5□□□□□ -0.73
SCARB2-227ENST00000640957 GAGE2EQ4V326 116 aa10.5□□□□□ -0.73
SCARB2-227ENST00000640957 GAGE2DQ9UEU5 116 aa10.5□□□□□ -0.73
SCARB2-227ENST00000640957 MSRB2Q9Y3D2 182 aa10.5□□□□□ -0.73
SCARB2-227ENST00000640957 GNRH2O43555 120 aa10.5□□□□□ -0.73
SCARB2-227ENST00000640957 SRD5A1P18405 259 aa10.5□□□□□ -0.73
SCARB2-227ENST00000640957 PDE6HQ13956 83 aa10.5□□□□□ -0.73
SCARB2-227ENST00000640957 TAL2Q16559 108 aa10.5□□□□□ -0.73
SCARB2-227ENST00000640957 A0A087WWL8 130 aa10.49□□□□□ -0.73
SCARB2-227ENST00000640957 F5H697 171 aa10.49□□□□□ -0.73
SCARB2-227ENST00000640957 SLC25A20O43772 301 aa10.49□□□□□ -0.73
SCARB2-227ENST00000640957 SUMO2P61956 95 aaKnown RBP10.49□□□□□ -0.73
SCARB2-227ENST00000640957 C15orf32Q32M92 178 aa10.49□□□□□ -0.73
SCARB2-227ENST00000640957 TMEM30BQ3MIR4 351 aa10.49□□□□□ -0.73
SCARB2-227ENST00000640957 FAM159AQ6UWV7 190 aa10.49□□□□□ -0.73
SCARB2-227ENST00000640957 Q6ZSV7 163 aa10.49□□□□□ -0.73
SCARB2-227ENST00000640957 G3V318 75 aa10.49□□□□□ -0.73
SCARB2-227ENST00000640957 SNCGO76070 127 aa10.49□□□□□ -0.73
SCARB2-227ENST00000640957 A6NJY4 79 aa10.48□□□□□ -0.73
SCARB2-227ENST00000640957 CD7P09564 240 aa10.48□□□□□ -0.73
SCARB2-227ENST00000640957 FAM74A4Q5TZK3 123 aa10.48□□□□□ -0.73
SCARB2-227ENST00000640957 NEXN-AS1Q8NBZ9 246 aa10.48□□□□□ -0.73
SCARB2-227ENST00000640957 WNK1Q9H4A3 2382 aa10.48□□□□□ -0.73
SCARB2-227ENST00000640957 DPM3Q9P2X0 92 aa10.48□□□□□ -0.73
SCARB2-227ENST00000640957 ZNF256Q9Y2P7 627 aaPredicted RBP10.48□□□□□ -0.73
SCARB2-227ENST00000640957 PRSS2P07478 247 aa10.47□□□□□ -0.73
SCARB2-227ENST00000640957 RAB1BQ9H0U4 201 aa10.47□□□□□ -0.73
SCARB2-227ENST00000640957 TP53TG1Q9Y2A0 90 aa10.47□□□□□ -0.73
SCARB2-227ENST00000640957 A4D1N5 150 aa10.47□□□□□ -0.73
SCARB2-227ENST00000640957 UBTD1Q9HAC8 227 aa10.47□□□□□ -0.73
SCARB2-227ENST00000640957 PHLDA3Q9Y5J5 127 aa10.47□□□□□ -0.73
SCARB2-227ENST00000640957 IGLV11-55A0A075B6I3 123 aa10.46□□□□□ -0.73
SCARB2-227ENST00000640957 UBE2D1P51668 147 aa10.46□□□□□ -0.73
SCARB2-227ENST00000640957 LINC01559Q495D7 138 aa10.46□□□□□ -0.73
SCARB2-227ENST00000640957 HRNRQ86YZ3 2850 aaPredicted RBP10.46□□□□□ -0.73
SCARB2-227ENST00000640957 FLNCQ14315 2725 aa10.46□□□□□ -0.73
SCARB2-227ENST00000640957 A0A0J9YY99 117 aa10.46□□□□□ -0.73
SCARB2-227ENST00000640957 RNASE4P34096 147 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms