RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 ORM1P02763 201 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 TYMSP04818 313 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 OR5AL1P0C617 328 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 S100A4P26447 101 aaKnown RBP4.83□□□□□ -1.64
UPF3B-205ENST00000636792 CRIP1P50238 77 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 OR5I1Q13606 314 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 RHEBQ15382 184 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 ADIRFQ15847 76 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 PRR27Q6MZM9 219 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 WDR73Q6P4I2 378 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 NHLRC2Q8NBF2 726 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 C11orf72Q8NBR9 251 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 SFRP2Q96HF1 295 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 C9orf85Q96MD7 179 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 CNFNQ9BYD5 112 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 RPP21Q9H633 154 aaKnown RBP4.83□□□□□ -1.64
UPF3B-205ENST00000636792 AP5S1Q9NUS5 200 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 U3KQK5 164 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 A0A087WWC5 75 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 IGHV3-16A0A0C4DH30 117 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 PLAC8L1A1L4L8 177 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 M0R2P5 195 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 GATCO43716 136 aaKnown RBP4.82□□□□□ -1.64
UPF3B-205ENST00000636792 NXPH4O95158 308 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 MT-ND4LP03901 98 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 SPART-AS1P0CW21 52 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 ADCYAP1P18509 176 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 FOXA3P55318 350 aaPredicted RBP4.82□□□□□ -1.64
UPF3B-205ENST00000636792 ERVFC1-1P60608 527 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 Q8N1X5 172 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 SVBPQ8N300 66 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 LINC00612Q8N6U2 182 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 NUDT10Q8NFP7 164 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 OR2D3Q8NGH3 330 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 OR10G8Q8NGN5 311 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 NUDT11Q96G61 164 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 CTDSP1Q9GZU7 261 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 SCRT2Q9NQ03 307 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 TMEM242Q9NWH2 141 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 C11orf21Q9P2W6 132 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 NAGKQ9UJ70 344 aa4.82□□□□□ -1.64
UPF3B-205ENST00000636792 IGHV4-4A0A075B6R2 117 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 TRAV9-1A0A075B6T8 112 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 A0A1B0GW15 77 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 PGPEP1LA6NFU8 196 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 ZNF705GA8MUZ8 300 aaPredicted RBP4.81□□□□□ -1.64
UPF3B-205ENST00000636792 RHODO00212 210 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 SPINK4O60575 86 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 SNAPINO95295 136 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 IGLC6P0CF74 106 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 RNASE3P12724 160 aaKnown RBP4.81□□□□□ -1.64
UPF3B-205ENST00000636792 CTRLP40313 264 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 CACNG7P62955 275 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 RPL19P84098 196 aaKnown RBP4.81□□□□□ -1.64
UPF3B-205ENST00000636792 MUC21Q5SSG8 566 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 ZFP82Q8N141 532 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 FER1L6-AS1Q8NA97 138 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 TSKUQ8WUA8 353 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 RASL10AQ92737 203 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 BORCS7Q96B45 105 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 BTF3L4Q96K17 158 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 IMMP2LQ96T52 175 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 EDA2RQ9HAV5 297 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 DKK2Q9UBU2 259 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 V9GYV3 84 aa4.81□□□□□ -1.64
UPF3B-205ENST00000636792 CXorf65A6NEN9 183 aa4.8□□□□□ -1.64
UPF3B-205ENST00000636792 A8MWV9 139 aa4.8□□□□□ -1.64
UPF3B-205ENST00000636792 M0R036 132 aa4.8□□□□□ -1.64
UPF3B-205ENST00000636792 S100A8P05109 93 aa4.8□□□□□ -1.64
UPF3B-205ENST00000636792 PRB4P10163 310 aaPredicted RBP4.8□□□□□ -1.64
UPF3B-205ENST00000636792 SLAQ13239 276 aa4.8□□□□□ -1.64
UPF3B-205ENST00000636792 FRZBQ92765 325 aa4.8□□□□□ -1.64
UPF3B-205ENST00000636792 FAM210BQ96KR6 192 aa4.8□□□□□ -1.64
UPF3B-205ENST00000636792 RNASE7Q9H1E1 156 aaKnown RBP4.8□□□□□ -1.64
UPF3B-205ENST00000636792 RETNQ9HD89 108 aa4.8□□□□□ -1.64
UPF3B-205ENST00000636792 NAT8BQ9UHF3 227 aa4.8□□□□□ -1.64
UPF3B-205ENST00000636792 PHLDA3Q9Y5J5 127 aa4.8□□□□□ -1.64
UPF3B-205ENST00000636792 TRAV4A0A0B4J268 109 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 A0A0J9YWU9 116 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 SMIM27A0A1W2PRY6 76 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 H3BVH4 76 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 ATP5G1P05496 136 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 ARMS2P0C7Q2 107 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 TRGC1P0CF51 173 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 HTN1P15515 57 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 AZU1P20160 251 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 TCTAP57738 103 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 DAD1P61803 113 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 FAM222AQ5U5X8 452 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 KCNIP4Q6PIL6 250 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 RASL11AQ6T310 242 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 ZFP2Q6ZN57 461 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 ATP5L2Q7Z4Y8 100 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 CLRN3Q8NCR9 226 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 C11orf45Q8TAV5 145 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 AP1S3Q96PC3 154 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 NOP10Q9NPE3 64 aaKnown RBP4.79□□□□□ -1.64
UPF3B-205ENST00000636792 GSN-AS1Q9NRJ2 163 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 MDFICQ9P1T7 246 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 PLA2G2DQ9UNK4 145 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms