RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 PTPRQQ9UMZ3 2332 aa12.54□□□□□ -0.4
CLN5-208ENST00000636183 DEFB131BA0A096LNP1 70 aa12.54□□□□□ -0.4
CLN5-208ENST00000636183 NPYP01303 97 aa12.54□□□□□ -0.4
CLN5-208ENST00000636183 C5orf56Q8N8D9 126 aa12.53□□□□□ -0.4
CLN5-208ENST00000636183 C7orf33Q8WU49 177 aa12.53□□□□□ -0.4
CLN5-208ENST00000636183 J3QQQ9 107 aa12.53□□□□□ -0.4
CLN5-208ENST00000636183 LY6G6DO95868 133 aa12.53□□□□□ -0.4
CLN5-208ENST00000636183 PRR20EP86478 221 aa12.53□□□□□ -0.4
CLN5-208ENST00000636183 PRR20CP86479 221 aa12.53□□□□□ -0.4
CLN5-208ENST00000636183 PRR20DP86480 221 aa12.53□□□□□ -0.4
CLN5-208ENST00000636183 PRR20BP86481 221 aa12.53□□□□□ -0.4
CLN5-208ENST00000636183 PRR20AP86496 221 aa12.53□□□□□ -0.4
CLN5-208ENST00000636183 DAZ2Q13117 558 aaKnown RBP12.53□□□□□ -0.4
CLN5-208ENST00000636183 DAZ4Q86SG3 579 aaKnown RBP12.53□□□□□ -0.4
CLN5-208ENST00000636183 CARD19Q96LW7 228 aa12.53□□□□□ -0.4
CLN5-208ENST00000636183 DAZ3Q9NR90 486 aaKnown RBP12.53□□□□□ -0.4
CLN5-208ENST00000636183 MGAMO43451 1857 aa12.53□□□□□ -0.4
CLN5-208ENST00000636183 DAZAP2Q15038 168 aaPredicted RBP12.53□□□□□ -0.4
CLN5-208ENST00000636183 AGPAT4-IT1Q9H0P7 198 aa12.53□□□□□ -0.4
CLN5-208ENST00000636183 MRPL35Q9NZE8 188 aaKnown RBP12.53□□□□□ -0.4
CLN5-208ENST00000636183 ORMDL1Q9P0S3 153 aa12.53□□□□□ -0.4
CLN5-208ENST00000636183 TRBV24-1A0A075B6N3 115 aa12.53□□□□□ -0.4
CLN5-208ENST00000636183 LTAP01374 205 aa12.53□□□□□ -0.4
CLN5-208ENST00000636183 IGKV4-1P06312 121 aa12.52□□□□□ -0.4
CLN5-208ENST00000636183 RITA1Q96K30 269 aa12.52□□□□□ -0.4
CLN5-208ENST00000636183 SPATA25Q9BR10 227 aa12.52□□□□□ -0.4
CLN5-208ENST00000636183 CRYGDP07320 174 aa12.52□□□□□ -0.4
CLN5-208ENST00000636183 WIPF3A6NGB9 483 aa12.52□□□□□ -0.41
CLN5-208ENST00000636183 HIST3H2BBQ8N257 126 aa12.52□□□□□ -0.41
CLN5-208ENST00000636183 GTSF1LQ9H1H1 148 aa12.52□□□□□ -0.41
CLN5-208ENST00000636183 CASC2Q6XLA1 102 aa12.52□□□□□ -0.41
CLN5-208ENST00000636183 NDUFA11Q86Y39 141 aa12.52□□□□□ -0.41
CLN5-208ENST00000636183 NCOR1P1Q9H4R4 102 aa12.52□□□□□ -0.41
CLN5-208ENST00000636183 PRORYQ9H606 182 aa12.52□□□□□ -0.41
CLN5-208ENST00000636183 ZNF843Q8N446 348 aa12.52□□□□□ -0.41
CLN5-208ENST00000636183 TRAV26-1A0A087WT03 109 aa12.51□□□□□ -0.41
CLN5-208ENST00000636183 INSL3P51460 131 aa12.51□□□□□ -0.41
CLN5-208ENST00000636183 CFPP27918 469 aa12.5□□□□□ -0.41
CLN5-208ENST00000636183 CT83Q5H943 113 aa12.5□□□□□ -0.41
CLN5-208ENST00000636183 PTPRDP23468 1912 aa12.5□□□□□ -0.41
CLN5-208ENST00000636183 SPAG11BQ08648 103 aa12.5□□□□□ -0.41
CLN5-208ENST00000636183 TNCP24821 2201 aa12.5□□□□□ -0.41
CLN5-208ENST00000636183 ETV2O00321 342 aaPredicted RBP12.5□□□□□ -0.41
CLN5-208ENST00000636183 IGKV1-17P01599 117 aa12.5□□□□□ -0.41
CLN5-208ENST00000636183 RNF152Q8N8N0 203 aa12.49□□□□□ -0.41
CLN5-208ENST00000636183 FXYD5Q96DB9 178 aa12.49□□□□□ -0.41
CLN5-208ENST00000636183 CITED1Q99966 193 aa12.49□□□□□ -0.41
CLN5-208ENST00000636183 MYLKQ15746 1914 aa12.49□□□□□ -0.41
CLN5-208ENST00000636183 RPL39LQ96EH5 51 aaKnown RBP12.49□□□□□ -0.41
CLN5-208ENST00000636183 NPSP0C0P6 89 aa12.49□□□□□ -0.41
CLN5-208ENST00000636183 BVES-AS1Q5T3Y7 98 aa12.48□□□□□ -0.41
CLN5-208ENST00000636183 VWA8A3KMH1 1905 aa12.48□□□□□ -0.41
CLN5-208ENST00000636183 UTF1Q5T230 341 aa12.48□□□□□ -0.41
CLN5-208ENST00000636183 FRMPD3Q5JV73 1810 aa12.48□□□□□ -0.41
CLN5-208ENST00000636183 C20orf78Q9BR46 151 aa12.48□□□□□ -0.41
CLN5-208ENST00000636183 KMT2EQ8IZD2 1858 aa12.48□□□□□ -0.41
CLN5-208ENST00000636183 LECT2O14960 151 aa12.48□□□□□ -0.41
CLN5-208ENST00000636183 ANKRD39Q53RE8 183 aa12.47□□□□□ -0.41
CLN5-208ENST00000636183 LINC00482Q8N8I6 264 aa12.47□□□□□ -0.41
CLN5-208ENST00000636183 GAGE12HA6NDE8 117 aa12.47□□□□□ -0.41
CLN5-208ENST00000636183 GPR179Q6PRD1 2367 aa12.47□□□□□ -0.41
CLN5-208ENST00000636183 PRO1854Q9UHT4 67 aa12.47□□□□□ -0.41
CLN5-208ENST00000636183 IGLC7A0M8Q6 106 aa12.47□□□□□ -0.41
CLN5-208ENST00000636183 HERV-K104P63124 156 aa12.47□□□□□ -0.41
CLN5-208ENST00000636183 C19orf84I3L1E1 186 aa12.46□□□□□ -0.41
CLN5-208ENST00000636183 Q8N1Y9 231 aa12.46□□□□□ -0.41
CLN5-208ENST00000636183 Q8N9W7 124 aa12.46□□□□□ -0.41
CLN5-208ENST00000636183 GREB1LQ9C091 1923 aaPredicted RBP12.46□□□□□ -0.42
CLN5-208ENST00000636183 UBE2D3P61077 147 aa12.45□□□□□ -0.42
CLN5-208ENST00000636183 FHL1Q13642 323 aa12.45□□□□□ -0.42
CLN5-208ENST00000636183 NREPQ16612 68 aa12.45□□□□□ -0.42
CLN5-208ENST00000636183 C18orf32Q8TCD1 76 aa12.45□□□□□ -0.42
CLN5-208ENST00000636183 FAM231BA6NCW3 169 aa12.45□□□□□ -0.42
CLN5-208ENST00000636183 BAALC-AS2P0C853 105 aa12.45□□□□□ -0.42
CLN5-208ENST00000636183 FAM19A1Q7Z5A9 133 aa12.45□□□□□ -0.42
CLN5-208ENST00000636183 A0A1B0GX51 115 aa12.45□□□□□ -0.42
CLN5-208ENST00000636183 F8VRH5 84 aa12.45□□□□□ -0.42
CLN5-208ENST00000636183 SND1-IT1Q9HBX3 110 aa12.45□□□□□ -0.42
CLN5-208ENST00000636183 TRBV7-3A0A075B6L6 115 aa12.45□□□□□ -0.42
CLN5-208ENST00000636183 GATA1P15976 413 aaPredicted RBP12.45□□□□□ -0.42
CLN5-208ENST00000636183 DEFB1P60022 68 aa12.45□□□□□ -0.42
CLN5-208ENST00000636183 FAM208BQ5VWN6 2430 aa12.45□□□□□ -0.42
CLN5-208ENST00000636183 IGHV4-31P0DP07 118 aa12.44□□□□□ -0.42
CLN5-208ENST00000636183 IGFL2Q6UWQ7 119 aa12.44□□□□□ -0.42
CLN5-208ENST00000636183 SPANXA1Q9NS26 97 aa12.44□□□□□ -0.42
CLN5-208ENST00000636183 IGF1P05019 195 aa12.44□□□□□ -0.42
CLN5-208ENST00000636183 RBM3P98179 157 aaKnown RBP12.44□□□□□ -0.42
CLN5-208ENST00000636183 MP68P56378 58 aa12.44□□□□□ -0.42
CLN5-208ENST00000636183 C16orf54Q6UWD8 224 aa12.44□□□□□ -0.42
CLN5-208ENST00000636183 HELZP42694 1942 aaKnown RBP12.44□□□□□ -0.42
CLN5-208ENST00000636183 LYL1P12980 280 aa12.44□□□□□ -0.42
CLN5-208ENST00000636183 HRCT1Q6UXD1 115 aa12.44□□□□□ -0.42
CLN5-208ENST00000636183 KIR2DL5BQ8NHK3 375 aa12.44□□□□□ -0.42
CLN5-208ENST00000636183 NCKAP5O14513 1909 aa12.44□□□□□ -0.42
CLN5-208ENST00000636183 Q0VG73 95 aa12.43□□□□□ -0.42
CLN5-208ENST00000636183 IGF2-ASQ6U949 168 aa12.43□□□□□ -0.42
CLN5-208ENST00000636183 C9orf85Q96MD7 179 aa12.43□□□□□ -0.42
CLN5-208ENST00000636183 CACNA1HO95180 2353 aa12.43□□□□□ -0.42
CLN5-208ENST00000636183 A8MWP6 167 aa12.43□□□□□ -0.42
CLN5-208ENST00000636183 CRYBA4P53673 196 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms