RNA–Protein interactions for RNA: ENST00000630858.2

DDX3X-221, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 3,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-221ENST00000630858 FOXC1Q12948 553 aa7.56□□□□□ -1.2
DDX3X-221ENST00000630858 SMIM20Q8N5G0 67 aa7.56□□□□□ -1.2
DDX3X-221ENST00000630858 TOMM6Q96B49 74 aa7.56□□□□□ -1.2
DDX3X-221ENST00000630858 IGLV11-55A0A075B6I3 123 aa7.56□□□□□ -1.2
DDX3X-221ENST00000630858 IGHV7-4-1A0A0J9YVY3 117 aa7.56□□□□□ -1.2
DDX3X-221ENST00000630858 SCGB2A1O75556 95 aa7.56□□□□□ -1.2
DDX3X-221ENST00000630858 IGFL2Q6UWQ7 119 aa7.56□□□□□ -1.2
DDX3X-221ENST00000630858 TRAV4A0A0B4J268 109 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 CCDC179H3BU77 68 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 TNFRSF13BO14836 293 aaPredicted RBP7.55□□□□□ -1.2
DDX3X-221ENST00000630858 HERV-K104P63124 156 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 SHISA2Q6UWI4 295 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 TRPT1Q86TN4 253 aaKnown RBP7.55□□□□□ -1.2
DDX3X-221ENST00000630858 C14orf178Q8N769 122 aaPredicted RBP7.55□□□□□ -1.2
DDX3X-221ENST00000630858 AJUBAQ96IF1 538 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 NHLRC4P0CG21 123 aaPredicted RBP7.55□□□□□ -1.2
DDX3X-221ENST00000630858 CFC1BP0CG36 223 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 CFC1P0CG37 223 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 S100A4P26447 101 aaKnown RBP7.55□□□□□ -1.2
DDX3X-221ENST00000630858 NDUFV3P56181 108 aaKnown RBP7.55□□□□□ -1.2
DDX3X-221ENST00000630858 HERVK_113P61574 105 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 Q6ZS46 218 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 RNASE6Q93091 150 aaKnown RBP7.55□□□□□ -1.2
DDX3X-221ENST00000630858 GAGE12JA6NER3 117 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 GAGE7O76087 117 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 CTSGP08311 255 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 GAGE12FP0CL80 117 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 GAGE12GP0CL81 117 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 GAGE12IP0CL82 117 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 CRIP2P52943 208 aaPredicted RBP7.55□□□□□ -1.2
DDX3X-221ENST00000630858 GAGE4Q13068 117 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 Q1RN00 199 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 TMEM170BQ5T4T1 132 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 C1orf122Q6ZSJ8 110 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 C10orf126Q8N4M7 172 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 SLC50A1Q9BRV3 221 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 KAAG1Q9UBP8 84 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 CRYBG3Q68DQ2 2970 aa7.55□□□□□ -1.2
DDX3X-221ENST00000630858 TRBV7-9A0A0J9YWB2 115 aa7.54□□□□□ -1.2
DDX3X-221ENST00000630858 A0A0J9YY99 117 aa7.54□□□□□ -1.2
DDX3X-221ENST00000630858 C11orf86A6NJI1 115 aa7.54□□□□□ -1.2
DDX3X-221ENST00000630858 CRLF1O75462 422 aa7.54□□□□□ -1.2
DDX3X-221ENST00000630858 PRO1854Q9UHT4 67 aa7.54□□□□□ -1.2
DDX3X-221ENST00000630858 NDPQ00604 133 aa7.54□□□□□ -1.2
DDX3X-221ENST00000630858 NTN5Q8WTR8 489 aaPredicted RBP7.54□□□□□ -1.2
DDX3X-221ENST00000630858 PSMG3-AS1Q96PY0 264 aa7.54□□□□□ -1.2
DDX3X-221ENST00000630858 RNF5Q99942 180 aa7.54□□□□□ -1.2
DDX3X-221ENST00000630858 CITED1Q99966 193 aa7.54□□□□□ -1.2
DDX3X-221ENST00000630858 BEX4Q9NWD9 120 aaPredicted RBP7.54□□□□□ -1.2
DDX3X-221ENST00000630858 POLQO75417 2590 aa7.53□□□□□ -1.2
DDX3X-221ENST00000630858 RHODO00212 210 aa7.53□□□□□ -1.2
DDX3X-221ENST00000630858 DUSP14O95147 198 aaKnown RBP7.53□□□□□ -1.2
DDX3X-221ENST00000630858 COX6B1P14854 86 aa7.53□□□□□ -1.2
DDX3X-221ENST00000630858 CREBBPQ92793 2442 aa7.53□□□□□ -1.2
DDX3X-221ENST00000630858 HIVEP3Q5T1R4 2406 aa7.53□□□□□ -1.2
DDX3X-221ENST00000630858 FAM208BQ5VWN6 2430 aa7.53□□□□□ -1.2
DDX3X-221ENST00000630858 IFITM1P13164 125 aa7.53□□□□□ -1.2
DDX3X-221ENST00000630858 ZNF672Q499Z4 452 aaPredicted RBP7.53□□□□□ -1.2
DDX3X-221ENST00000630858 ZFHX3Q15911 3703 aa7.53□□□□□ -1.2
DDX3X-221ENST00000630858 IGHV4-39P01824 125 aa7.53□□□□□ -1.2
DDX3X-221ENST00000630858 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.53□□□□□ -1.2
DDX3X-221ENST00000630858 DPM3Q9P2X0 92 aa7.52□□□□□ -1.21
DDX3X-221ENST00000630858 MSRB2Q9Y3D2 182 aa7.52□□□□□ -1.21
DDX3X-221ENST00000630858 MYO18BQ8IUG5 2567 aa7.52□□□□□ -1.21
DDX3X-221ENST00000630858 A0A0G2JNJ9 132 aa7.52□□□□□ -1.21
DDX3X-221ENST00000630858 IGHV3-30P01768 117 aa7.52□□□□□ -1.21
DDX3X-221ENST00000630858 IGHV3-30-5P0DP03 117 aa7.52□□□□□ -1.21
DDX3X-221ENST00000630858 SRD5A1P18405 259 aa7.52□□□□□ -1.21
DDX3X-221ENST00000630858 LINC01560Q8TB33 94 aa7.52□□□□□ -1.21
DDX3X-221ENST00000630858 TIMD4Q96H15 378 aa7.52□□□□□ -1.21
DDX3X-221ENST00000630858 Q9UFV3 132 aa7.52□□□□□ -1.21
DDX3X-221ENST00000630858 PHLDA3Q9Y5J5 127 aa7.52□□□□□ -1.21
DDX3X-221ENST00000630858 HRNRQ86YZ3 2850 aaPredicted RBP7.51□□□□□ -1.21
DDX3X-221ENST00000630858 SBSPONQ8IVN8 264 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 CSPG4Q6UVK1 2322 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 VPS13CQ709C8 3753 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 IGF1P05019 195 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 CLEC3BP05452 202 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 TSPEAR-AS2P59090 65 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 RPL32P62910 135 aaKnown RBP7.51□□□□□ -1.21
DDX3X-221ENST00000630858 FAM159AQ6UWV7 190 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 TP53TG1Q9Y2A0 90 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 IGHV3-64A0A075B6Q5 118 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 TRAV2A0A0B4J234 112 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 A4D1N5 150 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 RBAKDNA6NC62 111 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 LY6LH3BQJ8 138 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 BUB3O43684 328 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 LGALS3P17931 250 aaKnown RBP7.51□□□□□ -1.21
DDX3X-221ENST00000630858 GRNP28799 593 aaKnown RBP7.51□□□□□ -1.21
DDX3X-221ENST00000630858 ECSCRQ19T08 205 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 C15orf32Q32M92 178 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 DPH3P1Q9H4G8 78 aa7.51□□□□□ -1.21
DDX3X-221ENST00000630858 USP9YO00507 2555 aaPredicted RBP7.5□□□□□ -1.21
DDX3X-221ENST00000630858 TRAV8-4A0A0B4J246 113 aa7.5□□□□□ -1.21
DDX3X-221ENST00000630858 TEX49A0A1B0GTD5 131 aa7.5□□□□□ -1.21
DDX3X-221ENST00000630858 ASIPP42127 132 aa7.5□□□□□ -1.21
DDX3X-221ENST00000630858 PRR9Q5T870 116 aa7.5□□□□□ -1.21
DDX3X-221ENST00000630858 Q8N1Y9 231 aa7.5□□□□□ -1.21
DDX3X-221ENST00000630858 UTP20O75691 2785 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms