RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 CMC4P56277 68 aaPredicted RBP4.13□□□□□ -1.75
NEK3-211ENST00000629912 HILS1P60008 231 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 DEFB136Q30KP8 78 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 LBHQ53QV2 105 aaPredicted RBP4.13□□□□□ -1.75
NEK3-211ENST00000629912 LINC01545Q5VT33 79 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 LINC00173Q6ZV60 143 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 MRPL52Q86TS9 123 aaKnown RBP4.13□□□□□ -1.75
NEK3-211ENST00000629912 NRACQ8N912 160 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 KLHL30-AS1Q8NEE0 82 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 LINC01006Q8NI28 216 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 RAX2Q96IS3 184 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 JMJD8Q96S16 334 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 C20orf78Q9BR46 151 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 DPH3P1Q9H4G8 78 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 PHLDA3Q9Y5J5 127 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 TSSC4Q9Y5U2 329 aaPredicted RBP4.13□□□□□ -1.75
NEK3-211ENST00000629912 SELENOKQ9Y6D0 94 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 KIF25-AS1Q9Y6Z4 181 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 AGRNO00468 2067 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 CCDC168Q8NDH2 2452 aa4.13□□□□□ -1.75
NEK3-211ENST00000629912 IGHV1OR15-1A0A075B7D0 117 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 IGHV3-16A0A0C4DH30 117 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 H3BMM0 161 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 K7EMI3 77 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 CCL24O00175 119 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 GAS8-AS1O95177 125 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 NCR2O95944 276 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 HBDP02042 147 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 IGLC3P0DOY3 106 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 CD28P10747 220 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 HLA-DRB4P13762 266 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 LINC00315P59091 139 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 RPL32P62910 135 aaKnown RBP4.12□□□□□ -1.75
NEK3-211ENST00000629912 SPATA45Q537H7 98 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 TMEM61Q8N0U2 210 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 PTH2Q96A98 100 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 C9orf85Q96MD7 179 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 SPAG8Q99932 426 aaPredicted RBP4.12□□□□□ -1.75
NEK3-211ENST00000629912 LINC00467Q9BRT7 94 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 ZNF256Q9Y2P7 627 aaPredicted RBP4.12□□□□□ -1.75
NEK3-211ENST00000629912 PAM16Q9Y3D7 125 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 HLA-DRB4X5D2U9 266 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 MYO9AB2RTY4 2548 aa4.12□□□□□ -1.75
NEK3-211ENST00000629912 UNC79Q9P2D8 2635 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 SONP18583 2426 aaKnown RBP4.11□□□□□ -1.75
NEK3-211ENST00000629912 OR4C46A6NHA9 309 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 LY6G6DO95868 133 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 CD7P09564 240 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 IGLL1P15814 213 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 GATA1P15976 413 aaPredicted RBP4.11□□□□□ -1.75
NEK3-211ENST00000629912 DEFB131AP59861 70 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 LGALS9BQ3B8N2 356 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 CD300EQ496F6 205 aaPredicted RBP4.11□□□□□ -1.75
NEK3-211ENST00000629912 KHDC1LQ5JSQ8 128 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 LGALS9CQ6DKI2 356 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 ZNF705AQ6ZN79 300 aaPredicted RBP4.11□□□□□ -1.75
NEK3-211ENST00000629912 C14orf178Q8N769 122 aaPredicted RBP4.11□□□□□ -1.75
NEK3-211ENST00000629912 DYNLRB2Q8TF09 96 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 RASL10AQ92737 203 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 IFI27L1Q96BM0 104 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 AP1S3Q96PC3 154 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 DUX3Q96PT4 197 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 CITED2Q99967 270 aaPredicted RBP4.11□□□□□ -1.75
NEK3-211ENST00000629912 ST20Q9HBF5 79 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 UQCR10Q9UDW1 63 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 ACANP16112 2415 aa4.11□□□□□ -1.75
NEK3-211ENST00000629912 TRGV11A0A075B6L2 103 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 TRAV12-2A0A075B6T6 113 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 KNCNA6PVL3 124 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 M0R143 59 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 IGKV3-20P01619 116 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 FOSL1P15407 271 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 PROK1P58294 105 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 LAGE3Q14657 143 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 SPINK13Q1W4C9 94 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 PIK3CD-AS1Q5SR53 167 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 Q8N1Y9 231 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 SYT8Q8NBV8 401 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 FAM110AQ9BQ89 295 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 C2orf88Q9BSF0 95 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 SMIM2Q9BVW6 85 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 MAP6D1Q9H9H5 199 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 MDFICQ9P1T7 246 aa4.1□□□□□ -1.75
NEK3-211ENST00000629912 TIMM8BQ9Y5J9 83 aaPredicted RBP4.1□□□□□ -1.75
NEK3-211ENST00000629912 TRAV26-2A0A0B4J265 109 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 TRBV6-5A0A0K0K1A5 114 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 RBMY1BA6NDE4 496 aaKnown RBP4.09□□□□□ -1.75
NEK3-211ENST00000629912 RBMY1EA6NEQ0 496 aaKnown RBP4.09□□□□□ -1.75
NEK3-211ENST00000629912 LINC01549A6NIU2 74 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 ADARB2-AS1A8MUL3 147 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 HSBP1L1C9JCN9 74 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 SPRY2O43597 315 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 ATP5LO75964 103 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 CRYGDP07320 174 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 RBMY1DP0C7P1 496 aaKnown RBP4.09□□□□□ -1.75
NEK3-211ENST00000629912 SMIM17P0DL12 118 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 G0S2P27469 103 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 POLR2KP53803 58 aaKnown RBP4.09□□□□□ -1.75
NEK3-211ENST00000629912 SUMO2P61956 95 aaKnown RBP4.09□□□□□ -1.75
NEK3-211ENST00000629912 MAJINQ3KP22 176 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms