RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 BLOC1S1P78537 153 aa11.59□□□□□ -0.55
UBE3D-208ENST00000626828 C11orf52Q96A22 123 aa11.59□□□□□ -0.55
UBE3D-208ENST00000626828 Q9H8V8 135 aa11.59□□□□□ -0.55
UBE3D-208ENST00000626828 M0R036 132 aa11.58□□□□□ -0.56
UBE3D-208ENST00000626828 PDE6DO43924 150 aa11.58□□□□□ -0.56
UBE3D-208ENST00000626828 RPL35P42766 123 aaKnown RBP11.58□□□□□ -0.56
UBE3D-208ENST00000626828 MEF2BQ02080 365 aaPredicted RBP11.58□□□□□ -0.56
UBE3D-208ENST00000626828 LINC01559Q495D7 138 aa11.58□□□□□ -0.56
UBE3D-208ENST00000626828 ZNF506Q5JVG8 444 aa11.58□□□□□ -0.56
UBE3D-208ENST00000626828 CFAP126Q5VTH2 177 aa11.58□□□□□ -0.56
UBE3D-208ENST00000626828 NHLRC2Q8NBF2 726 aa11.58□□□□□ -0.56
UBE3D-208ENST00000626828 GRIFINA4D1Z8 144 aa11.57□□□□□ -0.56
UBE3D-208ENST00000626828 ARMS2P0C7Q2 107 aa11.57□□□□□ -0.56
UBE3D-208ENST00000626828 ALKAL2Q6UX46 152 aa11.57□□□□□ -0.56
UBE3D-208ENST00000626828 LINC00336Q6ZUF6 198 aa11.57□□□□□ -0.56
UBE3D-208ENST00000626828 NEGR1Q7Z3B1 354 aa11.57□□□□□ -0.56
UBE3D-208ENST00000626828 PCNPQ8WW12 178 aaKnown RBP11.57□□□□□ -0.56
UBE3D-208ENST00000626828 UPK3BQ9BT76 320 aa11.57□□□□□ -0.56
UBE3D-208ENST00000626828 VAX2Q9UIW0 290 aa11.57□□□□□ -0.56
UBE3D-208ENST00000626828 MRPS16Q9Y3D3 137 aaKnown RBP11.57□□□□□ -0.56
UBE3D-208ENST00000626828 NBDYA0A0U1RRE5 68 aa11.56□□□□□ -0.56
UBE3D-208ENST00000626828 A8MWV9 139 aa11.56□□□□□ -0.56
UBE3D-208ENST00000626828 BCL2P10415 239 aa11.56□□□□□ -0.56
UBE3D-208ENST00000626828 GYPEP15421 78 aa11.56□□□□□ -0.56
UBE3D-208ENST00000626828 GATA1P15976 413 aaPredicted RBP11.56□□□□□ -0.56
UBE3D-208ENST00000626828 NKX2-5P52952 324 aaPredicted RBP11.56□□□□□ -0.56
UBE3D-208ENST00000626828 SOHLH1Q5JUK2 328 aa11.56□□□□□ -0.56
UBE3D-208ENST00000626828 LYPD5Q6UWN5 251 aa11.56□□□□□ -0.56
UBE3D-208ENST00000626828 ZNF575Q86XF7 245 aa11.56□□□□□ -0.56
UBE3D-208ENST00000626828 MED9Q9NWA0 146 aa11.56□□□□□ -0.56
UBE3D-208ENST00000626828 DNAH10Q8IVF4 4471 aa11.56□□□□□ -0.56
UBE3D-208ENST00000626828 TMSB15BA0A087X1C1 80 aa11.55□□□□□ -0.56
UBE3D-208ENST00000626828 K7EQD1 137 aa11.55□□□□□ -0.56
UBE3D-208ENST00000626828 SRIP30626 198 aa11.55□□□□□ -0.56
UBE3D-208ENST00000626828 SH2D6Q7Z4S9 175 aa11.55□□□□□ -0.56
UBE3D-208ENST00000626828 SYT8Q8NBV8 401 aa11.55□□□□□ -0.56
UBE3D-208ENST00000626828 TRBV6-4A0A1B0GX49 114 aa11.54□□□□□ -0.56
UBE3D-208ENST00000626828 H3BVH4 76 aa11.54□□□□□ -0.56
UBE3D-208ENST00000626828 C1orf134Q5TEV5 83 aa11.54□□□□□ -0.56
UBE3D-208ENST00000626828 DMRTA1Q5VZB9 504 aa11.54□□□□□ -0.56
UBE3D-208ENST00000626828 ZFP2Q6ZN57 461 aa11.54□□□□□ -0.56
UBE3D-208ENST00000626828 PRADC1Q9BSG0 188 aa11.54□□□□□ -0.56
UBE3D-208ENST00000626828 DERL1Q9BUN8 251 aa11.54□□□□□ -0.56
UBE3D-208ENST00000626828 BOLA1Q9Y3E2 137 aa11.54□□□□□ -0.56
UBE3D-208ENST00000626828 PHLDA3Q9Y5J5 127 aa11.54□□□□□ -0.56
UBE3D-208ENST00000626828 IGHV3-73A0A0B4J1V6 119 aa11.53□□□□□ -0.56
UBE3D-208ENST00000626828 SCRT2Q9NQ03 307 aa11.53□□□□□ -0.56
UBE3D-208ENST00000626828 EPPK1P58107 5090 aaKnown RBP11.52□□□□□ -0.56
UBE3D-208ENST00000626828 RAB19A4D1S5 217 aa11.52□□□□□ -0.57
UBE3D-208ENST00000626828 RTL8CO15255 209 aa11.52□□□□□ -0.57
UBE3D-208ENST00000626828 CXCL1P09341 107 aa11.52□□□□□ -0.57
UBE3D-208ENST00000626828 MGST1P10620 155 aaKnown RBP11.52□□□□□ -0.57
UBE3D-208ENST00000626828 GNG4P50150 75 aa11.52□□□□□ -0.57
UBE3D-208ENST00000626828 CENPWQ5EE01 88 aa11.52□□□□□ -0.57
UBE3D-208ENST00000626828 PRR27Q6MZM9 219 aa11.52□□□□□ -0.57
UBE3D-208ENST00000626828 SLC25A29Q8N8R3 303 aa11.52□□□□□ -0.57
UBE3D-208ENST00000626828 LYPD6BQ8NI32 183 aa11.52□□□□□ -0.57
UBE3D-208ENST00000626828 DAZAP1Q96EP5 407 aaKnown RBP11.52□□□□□ -0.57
UBE3D-208ENST00000626828 SMIM12Q96EX1 92 aa11.52□□□□□ -0.57
UBE3D-208ENST00000626828 PARLQ9H300 379 aa11.52□□□□□ -0.57
UBE3D-208ENST00000626828 MED14OSP0DP75 135 aa11.51□□□□□ -0.57
UBE3D-208ENST00000626828 RHOHQ15669 191 aa11.51□□□□□ -0.57
UBE3D-208ENST00000626828 TTC32Q5I0X7 151 aa11.51□□□□□ -0.57
UBE3D-208ENST00000626828 BIN3Q9NQY0 253 aa11.51□□□□□ -0.57
UBE3D-208ENST00000626828 A0A1W2PPQ1 181 aa11.5□□□□□ -0.57
UBE3D-208ENST00000626828 RBFOX3A6NFN3 312 aa11.5□□□□□ -0.57
UBE3D-208ENST00000626828 SIVA1O15304 175 aa11.5□□□□□ -0.57
UBE3D-208ENST00000626828 IGLV2-8P01709 118 aa11.5□□□□□ -0.57
UBE3D-208ENST00000626828 RPL19P84098 196 aaKnown RBP11.5□□□□□ -0.57
UBE3D-208ENST00000626828 ZFP82Q8N141 532 aa11.5□□□□□ -0.57
UBE3D-208ENST00000626828 SFRP2Q96HF1 295 aa11.5□□□□□ -0.57
UBE3D-208ENST00000626828 JPT2Q9H910 190 aa11.5□□□□□ -0.57
UBE3D-208ENST00000626828 LOC100131303A0A0U1RQF7 123 aa11.49□□□□□ -0.57
UBE3D-208ENST00000626828 PRSS29PA6NIE9 313 aa11.49□□□□□ -0.57
UBE3D-208ENST00000626828 M0R381 172 aa11.49□□□□□ -0.57
UBE3D-208ENST00000626828 RHODO00212 210 aa11.49□□□□□ -0.57
UBE3D-208ENST00000626828 NXPH4O95158 308 aa11.49□□□□□ -0.57
UBE3D-208ENST00000626828 C6orf223Q8N319 242 aa11.49□□□□□ -0.57
UBE3D-208ENST00000626828 SSBP4Q9BWG4 385 aaPredicted RBP11.49□□□□□ -0.57
UBE3D-208ENST00000626828 TIRAPP58753 221 aa11.48□□□□□ -0.57
UBE3D-208ENST00000626828 RPS20P60866 119 aaKnown RBP11.48□□□□□ -0.57
UBE3D-208ENST00000626828 UFSP1Q6NVU6 142 aa11.48□□□□□ -0.57
UBE3D-208ENST00000626828 SAMD10Q9BYL1 202 aa11.48□□□□□ -0.57
UBE3D-208ENST00000626828 TMEM250H0YL14 139 aa11.47□□□□□ -0.57
UBE3D-208ENST00000626828 OR5AL1P0C617 328 aa11.47□□□□□ -0.57
UBE3D-208ENST00000626828 BTF3P20290 206 aaKnown RBP11.47□□□□□ -0.57
UBE3D-208ENST00000626828 Q6ZSN1 163 aa11.47□□□□□ -0.57
UBE3D-208ENST00000626828 FRAS1Q86XX4 4008 aa11.47□□□□□ -0.57
UBE3D-208ENST00000626828 TRBV20OR9-2A0A075B6H5 130 aa11.46□□□□□ -0.57
UBE3D-208ENST00000626828 TRAV9-2A0A087WT02 112 aa11.46□□□□□ -0.57
UBE3D-208ENST00000626828 C19orf71A6NCJ1 209 aa11.46□□□□□ -0.57
UBE3D-208ENST00000626828 SNAI2O43623 268 aa11.46□□□□□ -0.57
UBE3D-208ENST00000626828 CRYGDP07320 174 aa11.46□□□□□ -0.57
UBE3D-208ENST00000626828 DNAH17Q9UFH2 4485 aa11.46□□□□□ -0.58
UBE3D-208ENST00000626828 XKRY2A2RUG3 117 aa11.45□□□□□ -0.58
UBE3D-208ENST00000626828 P01737 135 aa11.45□□□□□ -0.58
UBE3D-208ENST00000626828 SPANXN1Q5VSR9 72 aa11.45□□□□□ -0.58
UBE3D-208ENST00000626828 OR2D3Q8NGH3 330 aa11.45□□□□□ -0.58
UBE3D-208ENST00000626828 ATP6V0E2Q8NHE4 81 aa11.45□□□□□ -0.58
UBE3D-208ENST00000626828 EIF5A2Q9GZV4 153 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms