RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 MAST4O15021 2626 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 HBBP68871 147 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 EBI3Q14213 229 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 BATFQ16520 125 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 GTF2H5Q6ZYL4 71 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 C1orf158Q8N1D5 194 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 OTORQ9NRC9 128 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 TMEM14CQ9P0S9 112 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 F8W735 103 aaPredicted RBP8.88□□□□□ -0.99
LINC00538-201ENST00000626109 H7C1H1 209 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 LTAP01374 205 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 PLGLAQ15195 96 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 MMDQ15546 238 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 LY6EQ16553 131 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 C2orf48Q96LS8 159 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 OVOL2Q9BRP0 275 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 Q9H3A6 140 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 UQCR10Q9UDW1 63 aa8.88□□□□□ -0.99
LINC00538-201ENST00000626109 SONP18583 2426 aaKnown RBP8.87□□□□□ -0.99
LINC00538-201ENST00000626109 NAV3Q8IVL0 2385 aa8.87□□□□□ -0.99
LINC00538-201ENST00000626109 TCRAP04437 139 aa8.87□□□□□ -0.99
LINC00538-201ENST00000626109 FGF6P10767 208 aa8.87□□□□□ -0.99
LINC00538-201ENST00000626109 CTRLP40313 264 aa8.87□□□□□ -0.99
LINC00538-201ENST00000626109 TDRG1Q3Y452 100 aa8.87□□□□□ -0.99
LINC00538-201ENST00000626109 SPATA45Q537H7 98 aa8.87□□□□□ -0.99
LINC00538-201ENST00000626109 OR5A1Q8NGJ0 315 aa8.87□□□□□ -0.99
LINC00538-201ENST00000626109 TM2D2Q9BX73 214 aa8.87□□□□□ -0.99
LINC00538-201ENST00000626109 A6NDX4 124 aa8.86□□□□□ -0.99
LINC00538-201ENST00000626109 C3orf79P0CE67 100 aa8.86□□□□□ -0.99
LINC00538-201ENST00000626109 LYZP61626 148 aa8.86□□□□□ -0.99
LINC00538-201ENST00000626109 Q8N6K4 173 aa8.86□□□□□ -0.99
LINC00538-201ENST00000626109 KIR2DL4Q99706 377 aa8.86□□□□□ -0.99
LINC00538-201ENST00000626109 COX11Q9Y6N1 276 aa8.86□□□□□ -0.99
LINC00538-201ENST00000626109 LOC107984640A0A0U1RRK4 108 aa8.86□□□□□ -0.99
LINC00538-201ENST00000626109 A0A1B0GXF2 115 aa8.86□□□□□ -0.99
LINC00538-201ENST00000626109 DNAJC9-AS1A6NH13 148 aa8.86□□□□□ -0.99
LINC00538-201ENST00000626109 FAM106AQ4KMX7 169 aa8.86□□□□□ -0.99
LINC00538-201ENST00000626109 TMEM219Q86XT9 240 aa8.86□□□□□ -0.99
LINC00538-201ENST00000626109 TNCP24821 2201 aa8.85□□□□□ -0.99
LINC00538-201ENST00000626109 TRBV6-1A0A0K0K1D8 114 aa8.85□□□□□ -0.99
LINC00538-201ENST00000626109 IGLC1P0CG04 106 aa8.85□□□□□ -0.99
LINC00538-201ENST00000626109 CNTFRP26992 372 aa8.85□□□□□ -0.99
LINC00538-201ENST00000626109 LYPD1Q8N2G4 141 aa8.85□□□□□ -0.99
LINC00538-201ENST00000626109 FAM19A2Q8N3H0 131 aa8.85□□□□□ -0.99
LINC00538-201ENST00000626109 Q8N976 141 aa8.85□□□□□ -0.99
LINC00538-201ENST00000626109 MOB4Q9Y3A3 225 aa8.85□□□□□ -0.99
LINC00538-201ENST00000626109 C19orf71A6NCJ1 209 aa8.84□□□□□ -0.99
LINC00538-201ENST00000626109 I3L2K1 104 aa8.84□□□□□ -0.99
LINC00538-201ENST00000626109 RPL24P83731 157 aaKnown RBP8.84□□□□□ -0.99
LINC00538-201ENST00000626109 BPIFA4PQ86YQ2 179 aa8.84□□□□□ -0.99
LINC00538-201ENST00000626109 NPBQ8NG41 125 aa8.84□□□□□ -0.99
LINC00538-201ENST00000626109 CHCHD1Q96BP2 118 aaKnown RBP8.84□□□□□ -0.99
LINC00538-201ENST00000626109 ZNF256Q9Y2P7 627 aaPredicted RBP8.84□□□□□ -0.99
LINC00538-201ENST00000626109 IGHV3-21A0A0B4J1V1 117 aa8.84□□□□□ -1
LINC00538-201ENST00000626109 FAM181BA6NEQ2 426 aa8.84□□□□□ -1
LINC00538-201ENST00000626109 APELAP0DMC3 54 aa8.84□□□□□ -1
LINC00538-201ENST00000626109 GDF5OSQ5U4N7 250 aa8.84□□□□□ -1
LINC00538-201ENST00000626109 SYT8Q8NBV8 401 aa8.84□□□□□ -1
LINC00538-201ENST00000626109 SPATA25Q9BR10 227 aa8.84□□□□□ -1
LINC00538-201ENST00000626109 ESM1Q9NQ30 184 aa8.84□□□□□ -1
LINC00538-201ENST00000626109 FN1P02751 2386 aaKnown RBP8.83□□□□□ -1
LINC00538-201ENST00000626109 GAGE12HA6NDE8 117 aa8.83□□□□□ -1
LINC00538-201ENST00000626109 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.83□□□□□ -1
LINC00538-201ENST00000626109 NDUFA3O95167 84 aa8.83□□□□□ -1
LINC00538-201ENST00000626109 HSD52Q0P140 79 aa8.83□□□□□ -1
LINC00538-201ENST00000626109 FER1L6-AS1Q8NA97 138 aa8.83□□□□□ -1
LINC00538-201ENST00000626109 PRADC1Q9BSG0 188 aa8.83□□□□□ -1
LINC00538-201ENST00000626109 TRGV11A0A075B6L2 103 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 RNASE1P07998 156 aaKnown RBP8.82□□□□□ -1
LINC00538-201ENST00000626109 RBMY1CP0DJD4 496 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 LINC00694P0DN24 101 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 IGLC2P0DOY2 106 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 IGLC3P0DOY3 106 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 HNRNPA3P51991 378 aaKnown RBP8.82□□□□□ -1
LINC00538-201ENST00000626109 Q86TA4 180 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 C5orf56Q8N8D9 126 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 Q8N9W7 124 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 PHLDA1Q8WV24 401 aaPredicted RBP8.82□□□□□ -1
LINC00538-201ENST00000626109 PGLYRP4Q96LB8 373 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 RNF114Q9Y508 228 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 NSD1Q96L73 2696 aaPredicted RBP8.82□□□□□ -1
LINC00538-201ENST00000626109 TRAV9-2A0A087WT02 112 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 GAGE12BA1L429 117 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 CT45A10P0DMU9 189 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 FOXA3P55318 350 aaPredicted RBP8.82□□□□□ -1
LINC00538-201ENST00000626109 Q6ZN92 141 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 TMEM75Q8N9X5 138 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 SHANK2-AS3Q9BTD1 123 aa8.82□□□□□ -1
LINC00538-201ENST00000626109 ANK3Q12955 4377 aaKnown RBP8.81□□□□□ -1
LINC00538-201ENST00000626109 NDUFB8O95169 186 aa8.81□□□□□ -1
LINC00538-201ENST00000626109 LGALS1P09382 135 aaKnown RBP8.81□□□□□ -1
LINC00538-201ENST00000626109 PRNTQ86SH4 94 aa8.81□□□□□ -1
LINC00538-201ENST00000626109 TMEM70Q9BUB7 260 aa8.81□□□□□ -1
LINC00538-201ENST00000626109 EDA2RQ9HAV5 297 aa8.81□□□□□ -1
LINC00538-201ENST00000626109 MTORP42345 2549 aa8.81□□□□□ -1
LINC00538-201ENST00000626109 TRBV19A0A075B6N1 114 aa8.8□□□□□ -1
LINC00538-201ENST00000626109 RIGQ13278 110 aa8.8□□□□□ -1
LINC00538-201ENST00000626109 Q6AWC8 147 aa8.8□□□□□ -1
LINC00538-201ENST00000626109 LINC00322Q6ZN03 302 aaPredicted RBP8.8□□□□□ -1
LINC00538-201ENST00000626109 GTSF1Q8WW33 167 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 182.1 ms