RNA–Protein interactions for RNA: ENST00000626012.2

HDAC10-222, Transcript of histone deacetylase 10, human

TSL 5 BASIC

Gene HDAC10, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-222	ENST00000626012	TRAV12-2	A0A075B6T6	113 aa		13.21	□□□□□ -0.3
HDAC10-222	ENST00000626012		A0A087WWL8	130 aa		13.21	□□□□□ -0.3
HDAC10-222	ENST00000626012	S100A7	P31151	101 aa		13.21	□□□□□ -0.3
HDAC10-222	ENST00000626012	IGHG2	P01859	326 aa		13.2	□□□□□ -0.3
HDAC10-222	ENST00000626012	RNASE3	P12724	160 aa	Known RBP	13.2	□□□□□ -0.3
HDAC10-222	ENST00000626012		A0A0G2JLM5	398 aa		13.2	□□□□□ -0.3
HDAC10-222	ENST00000626012		A6NDX4	124 aa		13.2	□□□□□ -0.3
HDAC10-222	ENST00000626012	GAGE10	A6NGK3	116 aa		13.2	□□□□□ -0.3
HDAC10-222	ENST00000626012	LINC01546	A6NGU7	62 aa		13.2	□□□□□ -0.3
HDAC10-222	ENST00000626012	HSD52	Q0P140	79 aa		13.2	□□□□□ -0.3
HDAC10-222	ENST00000626012	CHAC1	Q9BUX1	264 aa		13.2	□□□□□ -0.3
HDAC10-222	ENST00000626012	RNF223	E7ERA6	249 aa		13.19	□□□□□ -0.3
HDAC10-222	ENST00000626012	NDUFA4	O00483	81 aa		13.19	□□□□□ -0.3
HDAC10-222	ENST00000626012	DPM2	O94777	84 aa		13.19	□□□□□ -0.3
HDAC10-222	ENST00000626012	PRB1	P04280	392 aa		13.19	□□□□□ -0.3
HDAC10-222	ENST00000626012	CLEC2A	Q6UVW9	174 aa		13.19	□□□□□ -0.3
HDAC10-222	ENST00000626012	C2CD3	Q4AC94	2353 aa		13.19	□□□□□ -0.3
HDAC10-222	ENST00000626012	SEC11A	P67812	179 aa		13.19	□□□□□ -0.3
HDAC10-222	ENST00000626012	SMIM2	Q9BVW6	85 aa		13.19	□□□□□ -0.3
HDAC10-222	ENST00000626012	MEGF9	Q9H1U4	602 aa		13.19	□□□□□ -0.3
HDAC10-222	ENST00000626012	TRAV12-3	A0A0B4J271	114 aa		13.18	□□□□□ -0.3
HDAC10-222	ENST00000626012	MSMB	P08118	114 aa		13.18	□□□□□ -0.3
HDAC10-222	ENST00000626012	ZNF688	P0C7X2	276 aa		13.18	□□□□□ -0.3
HDAC10-222	ENST00000626012	MYOZ3	Q8TDC0	251 aa		13.18	□□□□□ -0.3
HDAC10-222	ENST00000626012	OCIAD2	Q56VL3	154 aa		13.18	□□□□□ -0.3
HDAC10-222	ENST00000626012	MRPL53	Q96EL3	112 aa	Known RBP	13.18	□□□□□ -0.3
HDAC10-222	ENST00000626012	PRRC2A	P48634	2157 aa	Known RBP	13.17	□□□□□ -0.3
HDAC10-222	ENST00000626012	C9orf118	A6NHY6	69 aa		13.17	□□□□□ -0.3
HDAC10-222	ENST00000626012	CBY1	Q9Y3M2	126 aa		13.17	□□□□□ -0.3
HDAC10-222	ENST00000626012	APC	P25054	2843 aa		13.17	□□□□□ -0.3
HDAC10-222	ENST00000626012	TRAV21	A0A0B4J279	112 aa		13.17	□□□□□ -0.3
HDAC10-222	ENST00000626012	ASIP	P42127	132 aa		13.17	□□□□□ -0.3
HDAC10-222	ENST00000626012	SUMO2	P61956	95 aa	Known RBP	13.17	□□□□□ -0.3
HDAC10-222	ENST00000626012	OR9G4	Q8NGQ1	327 aa		13.17	□□□□□ -0.3
HDAC10-222	ENST00000626012	NHP2	Q9NX24	153 aa	Known RBP	13.17	□□□□□ -0.3
HDAC10-222	ENST00000626012	PRM2	P04554	102 aa		13.16	□□□□□ -0.3
HDAC10-222	ENST00000626012	ACAN	P16112	2415 aa		13.16	□□□□□ -0.3
HDAC10-222	ENST00000626012	NACA	E9PAV3	2078 aa		13.16	□□□□□ -0.3
HDAC10-222	ENST00000626012	AP1S3	Q96PC3	154 aa		13.16	□□□□□ -0.3
HDAC10-222	ENST00000626012	MTOR	P42345	2549 aa		13.16	□□□□□ -0.3
HDAC10-222	ENST00000626012		A6NDN8	102 aa		13.15	□□□□□ -0.3
HDAC10-222	ENST00000626012	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.15	□□□□□ -0.3	3e-6	■■□□□ 13.7
HDAC10-222	ENST00000626012	DEFB112	Q30KQ8	113 aa		13.15	□□□□□ -0.3
HDAC10-222	ENST00000626012	FAM74A4	Q5TZK3	123 aa		13.15	□□□□□ -0.3
HDAC10-222	ENST00000626012	MTURN	Q8N3F0	131 aa		13.15	□□□□□ -0.3
HDAC10-222	ENST00000626012	LINC00477	Q96M19	166 aa		13.15	□□□□□ -0.3
HDAC10-222	ENST00000626012	IGHV4-4	A0A075B6R2	117 aa		13.15	□□□□□ -0.3
HDAC10-222	ENST00000626012		H3BRM9	83 aa		13.15	□□□□□ -0.3
HDAC10-222	ENST00000626012	SCGB3A1	Q96QR1	104 aa		13.15	□□□□□ -0.3
HDAC10-222	ENST00000626012	UFSP1	Q6NVU6	142 aa		13.14	□□□□□ -0.31
HDAC10-222	ENST00000626012	DAZ1	Q9NQZ3	744 aa	Known RBP	13.14	□□□□□ -0.31
HDAC10-222	ENST00000626012	CRIP2	P52943	208 aa	Predicted RBP	13.14	□□□□□ -0.31
HDAC10-222	ENST00000626012	RPL39	P62891	51 aa	Known RBP	13.14	□□□□□ -0.31
HDAC10-222	ENST00000626012	CSTL1	Q9H114	145 aa		13.14	□□□□□ -0.31
HDAC10-222	ENST00000626012		A0A087WX48	190 aa		13.13	□□□□□ -0.31
HDAC10-222	ENST00000626012	DUSP14	O95147	198 aa	Known RBP	13.13	□□□□□ -0.31
HDAC10-222	ENST00000626012	IGLV1-40	P01703	118 aa		13.13	□□□□□ -0.31
HDAC10-222	ENST00000626012	PSMG4	Q5JS54	123 aa		13.13	□□□□□ -0.31
HDAC10-222	ENST00000626012	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	13.13	□□□□□ -0.31
HDAC10-222	ENST00000626012	VPS25	Q9BRG1	176 aa		13.13	□□□□□ -0.31
HDAC10-222	ENST00000626012	PPP1R14D	Q9NXH3	145 aa		13.13	□□□□□ -0.31
HDAC10-222	ENST00000626012	MDFIC	Q9P1T7	246 aa		13.13	□□□□□ -0.31
HDAC10-222	ENST00000626012	SMPX	Q9UHP9	88 aa		13.13	□□□□□ -0.31
HDAC10-222	ENST00000626012	OVOL1	O14753	267 aa		13.12	□□□□□ -0.31
HDAC10-222	ENST00000626012	CD7	P09564	240 aa		13.12	□□□□□ -0.31
HDAC10-222	ENST00000626012	C2orf66	Q6UXQ4	117 aa		13.12	□□□□□ -0.31
HDAC10-222	ENST00000626012	DPH3P1	Q9H4G8	78 aa		13.12	□□□□□ -0.31
HDAC10-222	ENST00000626012	ATP5L	O75964	103 aa		13.12	□□□□□ -0.31
HDAC10-222	ENST00000626012	DCANP1	Q8TF63	244 aa		13.12	□□□□□ -0.31
HDAC10-222	ENST00000626012	FAM19A4	Q96LR4	140 aa		13.12	□□□□□ -0.31
HDAC10-222	ENST00000626012	SPCS1	Q9Y6A9	102 aa		13.12	□□□□□ -0.31
HDAC10-222	ENST00000626012		F5H697	171 aa		13.11	□□□□□ -0.31
HDAC10-222	ENST00000626012	HTN1	P15515	57 aa		13.11	□□□□□ -0.31
HDAC10-222	ENST00000626012	ITPR3	Q14573	2671 aa		13.11	□□□□□ -0.31
HDAC10-222	ENST00000626012		A0A1W2PPM0	123 aa		13.11	□□□□□ -0.31
HDAC10-222	ENST00000626012	KLHL30-AS1	Q8NEE0	82 aa		13.11	□□□□□ -0.31
HDAC10-222	ENST00000626012	USMG5	Q96IX5	58 aa		13.11	□□□□□ -0.31
HDAC10-222	ENST00000626012	RIPPLY3	P57055	190 aa		13.1	□□□□□ -0.31
HDAC10-222	ENST00000626012	SYNJ2BP	P57105	145 aa		13.1	□□□□□ -0.31
HDAC10-222	ENST00000626012	LINC00315	P59091	139 aa		13.1	□□□□□ -0.31
HDAC10-222	ENST00000626012	DEFB136	Q30KP8	78 aa		13.1	□□□□□ -0.31
HDAC10-222	ENST00000626012	SFTA2	Q6UW10	78 aa		13.1	□□□□□ -0.31
HDAC10-222	ENST00000626012	C18orf65	Q6ZTR6	163 aa		13.1	□□□□□ -0.31
HDAC10-222	ENST00000626012		K7EP34	96 aa		13.1	□□□□□ -0.31
HDAC10-222	ENST00000626012	CDKN1B	P46527	198 aa		13.1	□□□□□ -0.31
HDAC10-222	ENST00000626012	CFHR3	Q02985	330 aa		13.1	□□□□□ -0.31
HDAC10-222	ENST00000626012	SPINK13	Q1W4C9	94 aa		13.1	□□□□□ -0.31
HDAC10-222	ENST00000626012	MRAP2	Q96G30	205 aa		13.1	□□□□□ -0.31
HDAC10-222	ENST00000626012	OPRPN	Q99935	248 aa	Predicted RBP	13.1	□□□□□ -0.31
HDAC10-222	ENST00000626012	CHTOP	Q9Y3Y2	248 aa	Known RBP	13.1	□□□□□ -0.31
HDAC10-222	ENST00000626012	FLNA	P21333	2647 aa	Known RBP	13.1	□□□□□ -0.31
HDAC10-222	ENST00000626012	UBR5	O95071	2799 aa	Predicted RBP	13.1	□□□□□ -0.31
HDAC10-222	ENST00000626012	SIVA1	O15304	175 aa		13.09	□□□□□ -0.31
HDAC10-222	ENST00000626012	BAALC	Q8WXS3	180 aa		13.09	□□□□□ -0.31
HDAC10-222	ENST00000626012	DUX3	Q96PT4	197 aa		13.09	□□□□□ -0.31
HDAC10-222	ENST00000626012	SAMD5	Q5TGI4	173 aa		13.09	□□□□□ -0.31
HDAC10-222	ENST00000626012	AMTN	Q6UX39	209 aa		13.09	□□□□□ -0.31
HDAC10-222	ENST00000626012	PRSS29P	A6NIE9	313 aa		13.09	□□□□□ -0.31
HDAC10-222	ENST00000626012	CYSLTR1	Q9Y271	337 aa		13.09	□□□□□ -0.31
HDAC10-222	ENST00000626012	TSHB	P01222	138 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms